Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:46:51 (1418757): wrapper (7.7.26015): starting
14:46:51 (1418757): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 14:46:51] Arguments: --nthreads 4
[2025-06-06 14:46:51] Threads: 4
[2025-06-06 14:46:51] Checking for CVMFS
[2025-06-06 14:46:51] No cvmfs_config command found, will try listing directly
[2025-06-06 14:46:51] CVMFS is ok
[2025-06-06 14:46:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 14:46:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 14:46:51] Further information can be found at the LHC@home message board.
[2025-06-06 14:46:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 14:46:51] Checking for apptainer binary...
[2025-06-06 14:46:51] which: no apptainer in ((null))
[2025-06-06 14:46:51] apptainer is not installed, using version from CVMFS
[2025-06-06 14:46:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 14:46:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 14:46:51] apptainer works
[2025-06-06 14:46:51] Set ATHENA_PROC_NUMBER=4
[2025-06-06 14:46:51] Set ATHENA_CORE_NUMBER=4
[2025-06-06 14:46:51] Starting ATLAS job with PandaID=6677545258
[2025-06-06 14:46:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 16:27:57]  *** The last 200 lines of the pilot log: ***
[2025-06-06 16:27:57]  is_altstaged=None
[2025-06-06 16:27:57]  is_tar=False
[2025-06-06 16:27:57]  lfn=log.45006595._025423.job.log.tgz.1
[2025-06-06 16:27:57]  mtime=0
[2025-06-06 16:27:57]  protocol_id=None
[2025-06-06 16:27:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 16:27:57]  replicas=None
[2025-06-06 16:27:57]  scope=mc23_13p6TeV
[2025-06-06 16:27:57]  status=None
[2025-06-06 16:27:57]  status_code=0
[2025-06-06 16:27:57]  storage_token=
[2025-06-06 16:27:57]  surl=/scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677545258/log.45006595._025423.job.log.tgz.1
[2025-06-06 16:27:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/50/log.45006595._025423.job.log.tgz.1
[2025-06-06 16:27:57]  workdir=None
[2025-06-06 16:27:57] ]
[2025-06-06 16:27:57] 2025-06-06 14:26:11,160 | INFO     | transferring file log.45006595._025423.job.log.tgz.1 from /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677545258/log.45006595._025423.job.log.tgz.1 to /scratch/b
[2025-06-06 16:27:57] 2025-06-06 14:26:11,160 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677545258/log.45006595._025423.job.log.tgz.1 /scratch/boinc/var/slot36/slots/0/lo
[2025-06-06 16:27:57] 2025-06-06 14:26:11,178 | INFO     | adding to output.list: log.45006595._025423.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/50/log.45006595._025423.job.log.tg
[2025-06-06 16:27:57] 2025-06-06 14:26:11,179 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 16:27:57] 2025-06-06 14:26:11,179 | INFO     | summary of transferred files:
[2025-06-06 16:27:57] 2025-06-06 14:26:11,179 | INFO     |  -- lfn=log.45006595._025423.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 16:27:57] 2025-06-06 14:26:11,179 | INFO     | stage-out finished correctly
[2025-06-06 16:27:57] 2025-06-06 14:26:11,278 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 16:27:57] 2025-06-06 14:26:11,371 | INFO     | job 6677545258 has state=finished
[2025-06-06 16:27:57] 2025-06-06 14:26:11,372 | INFO     | preparing for final server update for job 6677545258 in state='finished'
[2025-06-06 16:27:57] 2025-06-06 14:26:11,372 | INFO     | this job has now completed (state=finished)
[2025-06-06 16:27:57] 2025-06-06 14:26:11,373 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 16:27:57] 2025-06-06 14:26:11,373 | INFO     | log transfer has been attempted: DONE
[2025-06-06 16:27:57] 2025-06-06 14:26:11,373 | INFO     | job 6677545258 has finished - writing final server update
[2025-06-06 16:27:57] 2025-06-06 14:26:11,373 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_752660/.job.ad'
[2025-06-06 16:27:57] 2025-06-06 14:26:11,373 | INFO     | total number of processed events: 400 (read)
[2025-06-06 16:27:57] 2025-06-06 14:26:11,382 | INFO     | executing command: lscpu
[2025-06-06 16:27:57] 2025-06-06 14:26:11,453 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 16:27:57] 2025-06-06 14:26:11,699 | WARNING  | process 1429540 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 16:27:57] 2025-06-06 14:26:11,700 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677545258/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:27:57] 2025-06-06 14:26:11,995 | INFO     | number of running child processes to parent process 1429540: 1
[2025-06-06 16:27:57] 2025-06-06 14:26:11,995 | INFO     | maximum number of monitored processes: 6
[2025-06-06 16:27:57] 2025-06-06 14:26:14,497 | INFO     | monitor loop #442: job 0:6677545258 is in state 'finished'
[2025-06-06 16:27:57] 2025-06-06 14:26:14,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 16:27:57] 2025-06-06 14:26:17,000 | INFO     | monitor loop #443: job 0:6677545258 is in state 'finished'
[2025-06-06 16:27:57] 2025-06-06 14:26:17,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 16:27:57] 2025-06-06 14:26:17,551 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 16:27:57] 2025-06-06 14:26:17,552 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677545258/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:27:57] 2025-06-06 14:26:17,553 | INFO     | extracted standard info from prmon json
[2025-06-06 16:27:57] 2025-06-06 14:26:17,553 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 16:27:57] 2025-06-06 14:26:17,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 16:27:57] 2025-06-06 14:26:17,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 16:27:57] 2025-06-06 14:26:17,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 16:27:57] 2025-06-06 14:26:17,555 | INFO     | fitting pss+swap vs Time
[2025-06-06 16:27:57] 2025-06-06 14:26:17,556 | INFO     | sum of square deviations: 233641590.0
[2025-06-06 16:27:57] 2025-06-06 14:26:17,556 | INFO     | sum of deviations: -20777472849.00002
[2025-06-06 16:27:57] 2025-06-06 14:26:17,556 | INFO     | mean x: 1749217097.0
[2025-06-06 16:27:57] 2025-06-06 14:26:17,556 | INFO     | mean y: 2457009.89010989
[2025-06-06 16:27:57] 2025-06-06 14:26:17,557 | INFO     | -- intersect: 155558283949.45224
[2025-06-06 16:27:57] 2025-06-06 14:26:17,557 | INFO     | intersect: 155558283949.45224
[2025-06-06 16:27:57] 2025-06-06 14:26:17,557 | INFO     | chi2: 0.1908121364595081
[2025-06-06 16:27:57] 2025-06-06 14:26:17,557 | INFO     | -- intersect: 155558283949.45224
[2025-06-06 16:27:57] 2025-06-06 14:26:17,557 | INFO     | current memory leak: -88.93 B/s (using 91 data points, chi2=0.19)
[2025-06-06 16:27:57] 2025-06-06 14:26:17,557 | INFO     | ..............................
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . Timing measurements:
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . get job = 0 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . initial setup = 1 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . payload setup = 6 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . stage-in = 0 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . payload execution = 5923 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . stage-out = 0 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | . log creation = 0 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,558 | INFO     | ..............................
[2025-06-06 16:27:57] 2025-06-06 14:26:17,652 | INFO     | 
[2025-06-06 16:27:57] 2025-06-06 14:26:17,652 | INFO     | job summary report
[2025-06-06 16:27:57] 2025-06-06 14:26:17,652 | INFO     | --------------------------------------------------
[2025-06-06 16:27:57] 2025-06-06 14:26:17,652 | INFO     | PanDA job id: 6677545258
[2025-06-06 16:27:57] 2025-06-06 14:26:17,652 | INFO     | task id: 45006595
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | errors: (none)
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | pilot state: finished 
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | transexitcode: 0
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | exeerrorcode: 0
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | exeerrordiag: 
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | exitcode: 0
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | exitmsg: OK
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | cpuconsumptiontime: 22274 s
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | nevents: 400
[2025-06-06 16:27:57] 2025-06-06 14:26:17,653 | INFO     | neventsw: 0
[2025-06-06 16:27:57] 2025-06-06 14:26:17,654 | INFO     | pid: 1429540
[2025-06-06 16:27:57] 2025-06-06 14:26:17,654 | INFO     | pgrp: 1429540
[2025-06-06 16:27:57] 2025-06-06 14:26:17,654 | INFO     | corecount: 4
[2025-06-06 16:27:57] 2025-06-06 14:26:17,654 | INFO     | event service: False
[2025-06-06 16:27:57] 2025-06-06 14:26:17,654 | INFO     | sizes: {0: 2397239, 1: 2397353, 5: 2397587, 11: 2397643, 5934: 2424344, 5935: 2433491, 5942: 2433605}
[2025-06-06 16:27:57] 2025-06-06 14:26:17,654 | INFO     | --------------------------------------------------
[2025-06-06 16:27:57] 2025-06-06 14:26:17,654 | INFO     | 
[2025-06-06 16:27:57] 2025-06-06 14:26:17,655 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,674 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 16:27:57] 2025-06-06 14:26:17,675 | INFO     | job 6677545258 has completed (purged errors)
[2025-06-06 16:27:57] 2025-06-06 14:26:17,675 | INFO     | overall cleanup function is called
[2025-06-06 16:27:57] 2025-06-06 14:26:18,682 | INFO     | --- collectZombieJob: --- 10, [1429540]
[2025-06-06 16:27:57] 2025-06-06 14:26:18,682 | INFO     | zombie collector waiting for pid 1429540
[2025-06-06 16:27:57] 2025-06-06 14:26:18,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 16:27:57] 2025-06-06 14:26:18,683 | INFO     | collected zombie processes
[2025-06-06 16:27:57] 2025-06-06 14:26:18,683 | INFO     | will attempt to kill all subprocesses of pid=1429540
[2025-06-06 16:27:57] 2025-06-06 14:26:18,968 | INFO     | process IDs to be killed: [1429540] (in reverse order)
[2025-06-06 16:27:57] 2025-06-06 14:26:19,064 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 16:27:57] 2025-06-06 14:26:19,064 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 16:27:57] 2025-06-06 14:26:19,073 | INFO     | did not find any defunct processes belonging to 1429540
[2025-06-06 16:27:57] 2025-06-06 14:26:19,082 | INFO     | did not find any defunct processes belonging to 1429540
[2025-06-06 16:27:57] 2025-06-06 14:26:19,082 | INFO     | ready for new job
[2025-06-06 16:27:57] 2025-06-06 14:26:19,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 16:27:57] 2025-06-06 14:26:19,084 | INFO     | **************************************
[2025-06-06 16:27:57] 2025-06-06 14:26:19,084 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 16:27:57] 2025-06-06 14:26:19,084 | INFO     | **************************************
[2025-06-06 16:27:57] 2025-06-06 14:26:19,084 | INFO     | 
[2025-06-06 16:27:57] 2025-06-06 14:26:19,088 | INFO     | architecture information:
[2025-06-06 16:27:57] 2025-06-06 14:26:19,089 | INFO     | executing command: cat /etc/os-release
[2025-06-06 16:27:57] 2025-06-06 14:26:19,104 | INFO     | cat /etc/os-release:
[2025-06-06 16:27:57] NAME="CentOS Linux"
[2025-06-06 16:27:57] VERSION="7 (Core)"
[2025-06-06 16:27:57] ID="centos"
[2025-06-06 16:27:57] ID_LIKE="rhel fedora"
[2025-06-06 16:27:57] VERSION_ID="7"
[2025-06-06 16:27:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 16:27:57] ANSI_COLOR="0;31"
[2025-06-06 16:27:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 16:27:57] HOME_URL="https://www.centos.org/"
[2025-06-06 16:27:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 16:27:57] 
[2025-06-06 16:27:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 16:27:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 16:27:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 16:27:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 16:27:57] 
[2025-06-06 16:27:57] 2025-06-06 14:26:19,104 | INFO     | **************************************
[2025-06-06 16:27:57] 2025-06-06 14:26:19,607 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-06 16:27:57] 2025-06-06 14:26:19,621 | INFO     | sufficient remaining disk space (678938279936 B)
[2025-06-06 16:27:57] 2025-06-06 14:26:19,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 16:27:57] 2025-06-06 14:26:19,622 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 16:27:57] 2025-06-06 14:26:19,622 | INFO     | update_server=False
[2025-06-06 16:27:57] 2025-06-06 14:26:19,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 16:27:57] 2025-06-06 14:26:19,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 16:27:57] 2025-06-06 14:26:19,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:27:57] 2025-06-06 14:26:19,645 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 16:27:57] 2025-06-06 14:26:19,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 16:27:57] 2025-06-06 14:26:19,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 16:27:57] 2025-06-06 14:26:19,941 | INFO     | all job control threads have been joined
[2025-06-06 16:27:57] 2025-06-06 14:26:20,341 | INFO     | all payload control threads have been joined
[2025-06-06 16:27:57] 2025-06-06 14:26:20,359 | INFO     | all data control threads have been joined
[2025-06-06 16:27:57] 2025-06-06 14:26:20,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:27:57] 2025-06-06 14:26:20,509 | INFO     | aborting loop
[2025-06-06 16:27:57] 2025-06-06 14:26:20,627 | INFO     | [job] retrieve thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:20,628 | INFO     | [job] queue monitor thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:20,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:20,947 | INFO     | [job] control thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:20,970 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,102 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,268 | INFO     | [data] copytool_in thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,275 | INFO     | [job] validate thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,346 | INFO     | [payload] control thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,365 | INFO     | [data] control thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,424 | INFO     | [payload] failed_post thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,515 | INFO     | [job] job monitor thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,628 | INFO     | [data] copytool_out thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,815 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:21,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 16:27:57] 2025-06-06 14:26:22,145 | INFO     | [payload] validate_post thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:25,886 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 16:27:57] 2025-06-06 14:26:26,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22870468593472)>', '<ExcThread(monitor, started 22869887137536)>']
[2025-06-06 16:27:57] 2025-06-06 14:26:26,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 16:27:57] 2025-06-06 14:26:26,681 | INFO     | [monitor] control thread has ended
[2025-06-06 16:27:57] 2025-06-06 14:26:31,499 | INFO     | all workflow threads have been joined
[2025-06-06 16:27:57] 2025-06-06 14:26:31,499 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 16:27:57] 2025-06-06 14:26:31,500 | INFO     | traces error code: 0
[2025-06-06 16:27:57] 2025-06-06 14:26:31,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 16:27:57] 2025-06-06 14:26:31,648 [wrapper] ==== pilot stdout END ====
[2025-06-06 16:27:57] 2025-06-06 14:26:31,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 16:27:57] 2025-06-06 14:26:31,654 [wrapper] pilotpid: 1422464
[2025-06-06 16:27:57] 2025-06-06 14:26:31,657 [wrapper] Pilot exit status: 0
[2025-06-06 16:27:57] 2025-06-06 14:26:31,668 [wrapper] pandaids: 6677545258
[2025-06-06 16:27:57] 2025-06-06 14:26:31,732 [wrapper] cleanup supervisor_pilot 1599337 1422465
[2025-06-06 16:27:57] 2025-06-06 14:26:31,735 [wrapper] Test setup, not cleaning
[2025-06-06 16:27:57] 2025-06-06 14:26:31,738 [wrapper] apfmon messages muted
[2025-06-06 16:27:57] 2025-06-06 14:26:31,741 [wrapper] ==== wrapper stdout END ====
[2025-06-06 16:27:57] 2025-06-06 14:26:31,744 [wrapper] ==== wrapper stderr END ====
[2025-06-06 16:27:57]  *** Error codes and diagnostics ***
[2025-06-06 16:27:57]     "exeErrorCode": 0,
[2025-06-06 16:27:57]     "exeErrorDiag": "",
[2025-06-06 16:27:57]     "pilotErrorCode": 0,
[2025-06-06 16:27:57]     "pilotErrorDiag": "",
[2025-06-06 16:27:57]  *** Listing of results directory ***
[2025-06-06 16:27:57] total 390756
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc    495897 Jun  3 10:07 pilot3.tar.gz
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc      5111 Jun  3 10:12 queuedata.json
[2025-06-06 16:27:57] -rwx------ 1 boinc boinc     37140 Jun  3 10:13 runpilot2-wrapper.sh
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc       100 Jun  6 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 16:27:57] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 14:46 run_atlas
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc       105 Jun  6 14:46 job.xml
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc      6635 Jun  6 14:46 init_data.xml
[2025-06-06 16:27:57] -rw-r--r-- 2 boinc boinc 217690258 Jun  6 14:46 EVNT.45006593._001017.pool.root.1
[2025-06-06 16:27:57] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:46 start_atlas.sh
[2025-06-06 16:27:57] drwxrwx--x 2 boinc boinc      4096 Jun  6 14:46 shared
[2025-06-06 16:27:57] -rw-r--r-- 2 boinc boinc    508879 Jun  6 14:46 input.tar.gz
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc         0 Jun  6 14:46 boinc_lockfile
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc      2525 Jun  6 14:46 pandaJob.out
[2025-06-06 16:27:57] -rw------- 1 boinc boinc    985741 Jun  6 14:46 agis_schedconf.cvmfs.json
[2025-06-06 16:27:57] -rw------- 1 boinc boinc   1598969 Jun  6 14:46 agis_ddmendpoints.agis.ALL.json
[2025-06-06 16:27:57] drwx------ 4 boinc boinc      4096 Jun  6 14:47 pilot3
[2025-06-06 16:27:57] -rw------- 1 boinc boinc 176947006 Jun  6 16:25 HITS.45006595._025423.pool.root.1
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc       529 Jun  6 16:25 boinc_task_state.xml
[2025-06-06 16:27:57] -rw------- 1 boinc boinc        95 Jun  6 16:25 pilot_heartbeat.json
[2025-06-06 16:27:57] -rw------- 1 boinc boinc      1034 Jun  6 16:26 memory_monitor_summary.json
[2025-06-06 16:27:57] -rw------- 1 boinc boinc    249361 Jun  6 16:26 log.45006595._025423.job.log.tgz.1
[2025-06-06 16:27:57] -rw------- 1 boinc boinc      7731 Jun  6 16:26 heartbeat.json
[2025-06-06 16:27:57] -rw------- 1 boinc boinc      4363 Jun  6 16:26 pilotlog.txt
[2025-06-06 16:27:57] -rw------- 1 boinc boinc    581776 Jun  6 16:26 log.45006595._025423.job.log.1
[2025-06-06 16:27:57] -rw------- 1 boinc boinc       357 Jun  6 16:26 output.list
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc       620 Jun  6 16:26 runtime_log
[2025-06-06 16:27:57] -rw------- 1 boinc boinc    849920 Jun  6 16:26 result.tar.gz
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc      9025 Jun  6 16:26 runtime_log.err
[2025-06-06 16:27:57] -rw------- 1 boinc boinc       661 Jun  6 16:26 0afKDmjwbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5tiKDmSsbDbn.diag
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc        27 Jun  6 16:27 wrapper_checkpoint.txt
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc      8192 Jun  6 16:27 boinc_mmap_file
[2025-06-06 16:27:57] -rw-r--r-- 1 boinc boinc     21292 Jun  6 16:27 stderr.txt
[2025-06-06 16:27:57] HITS file was successfully produced:
[2025-06-06 16:27:57] -rw------- 1 boinc boinc 176947006 Jun  6 16:25 shared/HITS.pool.root.1
[2025-06-06 16:27:57]  *** Contents of shared directory: ***
[2025-06-06 16:27:57] total 386748
[2025-06-06 16:27:57] -rw-r--r-- 2 boinc boinc 217690258 Jun  6 14:46 ATLAS.root_0
[2025-06-06 16:27:57] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:46 start_atlas.sh
[2025-06-06 16:27:57] -rw-r--r-- 2 boinc boinc    508879 Jun  6 14:46 input.tar.gz
[2025-06-06 16:27:57] -rw------- 1 boinc boinc 176947006 Jun  6 16:25 HITS.pool.root.1
[2025-06-06 16:27:57] -rw------- 1 boinc boinc    849920 Jun  6 16:26 result.tar.gz
16:27:59 (1418757): run_atlas exited; CPU time 22466.259754
16:27:59 (1418757): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN