Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:50:43 (2635896): wrapper (7.7.26015): starting
06:50:43 (2635896): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:50:43] Arguments: --nthreads 8
[2025-06-03 06:50:43] Threads: 8
[2025-06-03 06:50:43] Checking for CVMFS
[2025-06-03 06:50:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:50:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:50:43] 2.12.6.0 8521 35771 420460 146739 2 197 32795988 40960000 10311 16776704 1 332278025 99.733 229633333 18934 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 06:50:43] CVMFS is ok
[2025-06-03 06:50:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:50:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:50:43] Further information can be found at the LHC@home message board.
[2025-06-03 06:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:50:43] Checking for apptainer binary...
[2025-06-03 06:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:50:43] Running /usr/bin/apptainer --version
[2025-06-03 06:50:43] apptainer version 1.4.1-1.el9
[2025-06-03 06:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:50:44] c7-4-30.aglt2.org
[2025-06-03 06:50:44] apptainer works
[2025-06-03 06:50:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:50:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:50:44] Starting ATLAS job with PandaID=6669238647
[2025-06-03 06:50:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:13:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:13:55]  is_tar=False
[2025-06-03 08:13:55]  lfn=log.44871837._095330.job.log.tgz.1
[2025-06-03 08:13:55]  mtime=0
[2025-06-03 08:13:55]  protocol_id=None
[2025-06-03 08:13:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 08:13:55]  replicas=None
[2025-06-03 08:13:55]  scope=mc23_13p6TeV
[2025-06-03 08:13:55]  status=None
[2025-06-03 08:13:55]  status_code=0
[2025-06-03 08:13:55]  storage_token=
[2025-06-03 08:13:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6669238647/log.44871837._095330.job.log.tgz.1
[2025-06-03 08:13:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/bd/log.44871837._095330.job.log.tgz.1
[2025-06-03 08:13:55]  workdir=None
[2025-06-03 08:13:55] ]
[2025-06-03 08:13:55] 2025-06-03 12:13:31,847 | INFO     | transferring file log.44871837._095330.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6669238647/log.44871837._095330.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 08:13:55] 2025-06-03 12:13:31,848 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6669238647/log.44871837._095330.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._095330.job
[2025-06-03 08:13:55] 2025-06-03 12:13:31,868 | INFO     | adding to output.list: log.44871837._095330.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/bd/log.44871837._095330.job.log.tg
[2025-06-03 08:13:55] 2025-06-03 12:13:31,869 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 08:13:55] 2025-06-03 12:13:31,869 | INFO     | summary of transferred files:
[2025-06-03 08:13:55] 2025-06-03 12:13:31,869 | INFO     |  -- lfn=log.44871837._095330.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 08:13:55] 2025-06-03 12:13:31,869 | INFO     | stage-out finished correctly
[2025-06-03 08:13:55] 2025-06-03 12:13:33,586 | WARNING  | process 2645933 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 08:13:55] 2025-06-03 12:13:33,586 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669238647/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:13:55] 2025-06-03 12:13:33,997 | INFO     | number of running child processes to parent process 2645933: 1
[2025-06-03 08:13:55] 2025-06-03 12:13:33,997 | INFO     | maximum number of monitored processes: 6
[2025-06-03 08:13:55] 2025-06-03 12:13:35,125 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 08:13:55] 2025-06-03 12:13:35,987 | INFO     | job 6669238647 has state=finished
[2025-06-03 08:13:55] 2025-06-03 12:13:35,988 | INFO     | preparing for final server update for job 6669238647 in state='finished'
[2025-06-03 08:13:55] 2025-06-03 12:13:35,988 | INFO     | this job has now completed (state=finished)
[2025-06-03 08:13:55] 2025-06-03 12:13:35,989 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 08:13:55] 2025-06-03 12:13:35,989 | INFO     | log transfer has been attempted: DONE
[2025-06-03 08:13:55] 2025-06-03 12:13:35,989 | INFO     | job 6669238647 has finished - writing final server update
[2025-06-03 08:13:55] 2025-06-03 12:13:35,989 | INFO     | total number of processed events: 400 (read)
[2025-06-03 08:13:55] 2025-06-03 12:13:36,008 | INFO     | executing command: lscpu
[2025-06-03 08:13:55] 2025-06-03 12:13:36,080 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 08:13:55] 2025-06-03 12:13:36,501 | INFO     | monitor loop #362: job 0:6669238647 is in state 'finished'
[2025-06-03 08:13:55] 2025-06-03 12:13:36,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:13:55] 2025-06-03 12:13:39,004 | INFO     | monitor loop #363: job 0:6669238647 is in state 'finished'
[2025-06-03 08:13:55] 2025-06-03 12:13:39,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:13:55] 2025-06-03 12:13:40,488 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 08:13:55] 2025-06-03 12:13:40,488 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6669238647/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:13:55] 2025-06-03 12:13:40,489 | INFO     | extracted standard info from prmon json
[2025-06-03 08:13:55] 2025-06-03 12:13:40,490 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:13:55] 2025-06-03 12:13:40,490 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:13:55] 2025-06-03 12:13:40,490 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:13:55] 2025-06-03 12:13:40,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:13:55] 2025-06-03 12:13:40,492 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:13:55] 2025-06-03 12:13:40,492 | INFO     | sum of square deviations: 125630262.5
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | sum of deviations: 9314789853.0
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | mean x: 1748950412.5
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | mean y: 2110088.108108108
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | -- intersect: -129672899989.62029
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | intersect: -129672899989.62029
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | chi2: 0.9574465196516813
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | -- intersect: -129672899989.62029
[2025-06-03 08:13:55] 2025-06-03 12:13:40,493 | INFO     | current memory leak: 74.14 B/s (using 74 data points, chi2=0.96)
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | ..............................
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . Timing measurements:
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . get job = 0 s
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . initial setup = 2 s
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . payload setup = 6 s
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . stage-in = 0 s
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . payload execution = 4931 s
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . stage-out = 0 s
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | . log creation = 0 s
[2025-06-03 08:13:55] 2025-06-03 12:13:40,494 | INFO     | ..............................
[2025-06-03 08:13:55] 2025-06-03 12:13:41,029 | INFO     | 
[2025-06-03 08:13:55] 2025-06-03 12:13:41,030 | INFO     | job summary report
[2025-06-03 08:13:55] 2025-06-03 12:13:41,030 | INFO     | --------------------------------------------------
[2025-06-03 08:13:55] 2025-06-03 12:13:41,030 | INFO     | PanDA job id: 6669238647
[2025-06-03 08:13:55] 2025-06-03 12:13:41,030 | INFO     | task id: 44871837
[2025-06-03 08:13:55] 2025-06-03 12:13:41,030 | INFO     | errors: (none)
[2025-06-03 08:13:55] 2025-06-03 12:13:41,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:13:55] 2025-06-03 12:13:41,031 | INFO     | pilot state: finished 
[2025-06-03 08:13:55] 2025-06-03 12:13:41,031 | INFO     | transexitcode: 0
[2025-06-03 08:13:55] 2025-06-03 12:13:41,031 | INFO     | exeerrorcode: 0
[2025-06-03 08:13:55] 2025-06-03 12:13:41,031 | INFO     | exeerrordiag: 
[2025-06-03 08:13:55] 2025-06-03 12:13:41,031 | INFO     | exitcode: 0
[2025-06-03 08:13:55] 2025-06-03 12:13:41,031 | INFO     | exitmsg: OK
[2025-06-03 08:13:55] 2025-06-03 12:13:41,031 | INFO     | cpuconsumptiontime: 33861 s
[2025-06-03 08:13:55] 2025-06-03 12:13:41,032 | INFO     | nevents: 400
[2025-06-03 08:13:55] 2025-06-03 12:13:41,032 | INFO     | neventsw: 0
[2025-06-03 08:13:55] 2025-06-03 12:13:41,032 | INFO     | pid: 2645933
[2025-06-03 08:13:55] 2025-06-03 12:13:41,032 | INFO     | pgrp: 2645933
[2025-06-03 08:13:55] 2025-06-03 12:13:41,033 | INFO     | corecount: 8
[2025-06-03 08:13:55] 2025-06-03 12:13:41,033 | INFO     | event service: False
[2025-06-03 08:13:55] 2025-06-03 12:13:41,033 | INFO     | sizes: {0: 2405063, 1: 2405262, 5: 2405468, 11: 2405524, 4941: 2431682, 4942: 2440623, 4945: 2440807, 4951: 2440977}
[2025-06-03 08:13:55] 2025-06-03 12:13:41,033 | INFO     | --------------------------------------------------
[2025-06-03 08:13:55] 2025-06-03 12:13:41,033 | INFO     | 
[2025-06-03 08:13:55] 2025-06-03 12:13:41,033 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 08:13:55] 2025-06-03 12:13:41,058 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,058 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,061 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:13:55] 2025-06-03 12:13:41,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,061 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:13:55] 2025-06-03 12:13:41,061 | INFO     | job 6669238647 has completed (purged errors)
[2025-06-03 08:13:55] 2025-06-03 12:13:41,061 | INFO     | overall cleanup function is called
[2025-06-03 08:13:55] 2025-06-03 12:13:41,375 | INFO     | PID=2639539 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 08:13:55] 2025-06-03 12:13:41,376 | INFO     | .. there are 15 such processes running
[2025-06-03 08:13:55] 2025-06-03 12:13:42,069 | INFO     | --- collectZombieJob: --- 10, [2645933]
[2025-06-03 08:13:55] 2025-06-03 12:13:42,070 | INFO     | zombie collector waiting for pid 2645933
[2025-06-03 08:13:55] 2025-06-03 12:13:42,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:13:55] 2025-06-03 12:13:42,070 | INFO     | collected zombie processes
[2025-06-03 08:13:55] 2025-06-03 12:13:42,070 | INFO     | will attempt to kill all subprocesses of pid=2645933
[2025-06-03 08:13:55] 2025-06-03 12:13:42,492 | INFO     | process IDs to be killed: [2645933] (in reverse order)
[2025-06-03 08:13:55] 2025-06-03 12:13:42,621 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:13:55] 2025-06-03 12:13:42,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:13:55] 2025-06-03 12:13:42,639 | INFO     | did not find any defunct processes belonging to 2645933
[2025-06-03 08:13:55] 2025-06-03 12:13:42,655 | INFO     | did not find any defunct processes belonging to 2645933
[2025-06-03 08:13:55] 2025-06-03 12:13:42,655 | INFO     | ready for new job
[2025-06-03 08:13:55] 2025-06-03 12:13:42,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:13:55] 2025-06-03 12:13:42,658 | INFO     | **************************************
[2025-06-03 08:13:55] 2025-06-03 12:13:42,658 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:13:55] 2025-06-03 12:13:42,658 | INFO     | **************************************
[2025-06-03 08:13:55] 2025-06-03 12:13:42,658 | INFO     | 
[2025-06-03 08:13:55] 2025-06-03 12:13:42,675 | INFO     | architecture information:
[2025-06-03 08:13:55] 2025-06-03 12:13:42,675 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:13:55] 2025-06-03 12:13:42,691 | INFO     | cat /etc/os-release:
[2025-06-03 08:13:55] NAME="CentOS Linux"
[2025-06-03 08:13:55] VERSION="7 (Core)"
[2025-06-03 08:13:55] ID="centos"
[2025-06-03 08:13:55] ID_LIKE="rhel fedora"
[2025-06-03 08:13:55] VERSION_ID="7"
[2025-06-03 08:13:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:13:55] ANSI_COLOR="0;31"
[2025-06-03 08:13:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:13:55] HOME_URL="https://www.centos.org/"
[2025-06-03 08:13:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:13:55] 
[2025-06-03 08:13:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:13:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:13:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:13:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:13:55] 
[2025-06-03 08:13:55] 2025-06-03 12:13:42,692 | INFO     | **************************************
[2025-06-03 08:13:55] 2025-06-03 12:13:43,194 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 08:13:55] 2025-06-03 12:13:43,212 | INFO     | sufficient remaining disk space (123651227648 B)
[2025-06-03 08:13:55] 2025-06-03 12:13:43,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:13:55] 2025-06-03 12:13:43,212 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:13:55] 2025-06-03 12:13:43,212 | INFO     | update_server=False
[2025-06-03 08:13:55] 2025-06-03 12:13:43,213 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:13:55] 2025-06-03 12:13:43,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:13:55] 2025-06-03 12:13:43,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:13:55] 2025-06-03 12:13:43,214 | INFO     | aborting loop
[2025-06-03 08:13:55] 2025-06-03 12:13:43,382 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:13:55] 2025-06-03 12:13:43,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:13:55] 2025-06-03 12:13:43,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:13:55] 2025-06-03 12:13:43,640 | INFO     | all data control threads have been joined
[2025-06-03 08:13:55] 2025-06-03 12:13:43,758 | INFO     | all payload control threads have been joined
[2025-06-03 08:13:55] 2025-06-03 12:13:44,215 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:44,218 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:44,443 | INFO     | all job control threads have been joined
[2025-06-03 08:13:55] 2025-06-03 12:13:44,530 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:44,645 | INFO     | [data] control thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:44,762 | INFO     | [payload] control thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,153 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,191 | INFO     | [job] validate thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,219 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,348 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,388 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,449 | INFO     | [job] control thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,458 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,535 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,569 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:45,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:13:55] 2025-06-03 12:13:45,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:13:55] 2025-06-03 12:13:46,582 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:49,719 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:13:55] 2025-06-03 12:13:50,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140366083577664)>', '<ExcThread(monitor, started 140365277415168)>']
[2025-06-03 08:13:55] 2025-06-03 12:13:50,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:13:55] 2025-06-03 12:13:50,410 | INFO     | [monitor] control thread has ended
[2025-06-03 08:13:55] 2025-06-03 12:13:55,113 | INFO     | all workflow threads have been joined
[2025-06-03 08:13:55] 2025-06-03 12:13:55,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:13:55] 2025-06-03 12:13:55,114 | INFO     | traces error code: 0
[2025-06-03 08:13:55] 2025-06-03 12:13:55,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:13:55] 2025-06-03 12:13:55,299 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:13:55] 2025-06-03 12:13:55,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:13:55] 2025-06-03 12:13:55,304 [wrapper] pilotpid: 2639539
[2025-06-03 08:13:55] 2025-06-03 12:13:55,306 [wrapper] Pilot exit status: 0
[2025-06-03 08:13:55] 2025-06-03 12:13:55,315 [wrapper] pandaids: 6669238647
[2025-06-03 08:13:55] 2025-06-03 12:13:55,407 [wrapper] cleanup supervisor_pilot 2993810 2639540
[2025-06-03 08:13:55] 2025-06-03 12:13:55,411 [wrapper] Test setup, not cleaning
[2025-06-03 08:13:55] 2025-06-03 12:13:55,414 [wrapper] apfmon messages muted
[2025-06-03 08:13:55] 2025-06-03 12:13:55,417 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:13:55] 2025-06-03 12:13:55,420 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:13:55]  *** Error codes and diagnostics ***
[2025-06-03 08:13:55]     "exeErrorCode": 0,
[2025-06-03 08:13:55]     "exeErrorDiag": "",
[2025-06-03 08:13:55]     "pilotErrorCode": 0,
[2025-06-03 08:13:55]     "pilotErrorDiag": "",
[2025-06-03 08:13:55]  *** Listing of results directory ***
[2025-06-03 08:13:55] total 421356
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:58 pilot3.tar.gz
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas      5111 May 29 01:00 queuedata.json
[2025-06-03 08:13:55] -rwx------. 1 boincer umatlas     37140 May 29 01:01 runpilot2-wrapper.sh
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas       100 Jun  3 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:13:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 06:50 run_atlas
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas       105 Jun  3 06:50 job.xml
[2025-06-03 08:13:55] -rw-r--r--. 2 boincer umatlas 223573254 Jun  3 06:50 EVNT.44871834._003744.pool.root.1
[2025-06-03 08:13:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:50 start_atlas.sh
[2025-06-03 08:13:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 06:50 shared
[2025-06-03 08:13:55] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 06:50 input.tar.gz
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas         0 Jun  3 06:50 boinc_lockfile
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 06:50 pandaJob.out
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas    984355 Jun  3 06:50 agis_schedconf.cvmfs.json
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas   1603667 Jun  3 06:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:13:55] drwx------. 4 boincer umatlas      4096 Jun  3 06:50 pilot3
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas      6937 Jun  3 08:09 init_data.xml
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas        95 Jun  3 08:12 pilot_heartbeat.json
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas 202503492 Jun  3 08:13 HITS.44871837._095330.pool.root.1
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas       529 Jun  3 08:13 boinc_task_state.xml
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas      1026 Jun  3 08:13 memory_monitor_summary.json
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas    295790 Jun  3 08:13 log.44871837._095330.job.log.tgz.1
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas      7681 Jun  3 08:13 heartbeat.json
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas        27 Jun  3 08:13 wrapper_checkpoint.txt
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 08:13 boinc_mmap_file
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas      4354 Jun  3 08:13 pilotlog.txt
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas    480252 Jun  3 08:13 log.44871837._095330.job.log.1
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas       357 Jun  3 08:13 output.list
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas       620 Jun  3 08:13 runtime_log
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas    798720 Jun  3 08:13 result.tar.gz
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 08:13 runtime_log.err
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas       651 Jun  3 08:13 naCLDmdZke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvodKDmLgoaOm.diag
[2025-06-03 08:13:55] -rw-r--r--. 1 boincer umatlas     21602 Jun  3 08:13 stderr.txt
[2025-06-03 08:13:55] HITS file was successfully produced:
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas 202503492 Jun  3 08:13 shared/HITS.pool.root.1
[2025-06-03 08:13:55]  *** Contents of shared directory: ***
[2025-06-03 08:13:55] total 417396
[2025-06-03 08:13:55] -rw-r--r--. 2 boincer umatlas 223573254 Jun  3 06:50 ATLAS.root_0
[2025-06-03 08:13:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:50 start_atlas.sh
[2025-06-03 08:13:55] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 06:50 input.tar.gz
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas 202503492 Jun  3 08:13 HITS.pool.root.1
[2025-06-03 08:13:55] -rw-------. 1 boincer umatlas    798720 Jun  3 08:13 result.tar.gz
08:13:57 (2635896): run_atlas exited; CPU time 34023.360180
08:13:57 (2635896): called boinc_finish(0)

</stderr_txt>
]]>

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