Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:59:46 (776558): wrapper (7.7.26015): starting
06:59:46 (776558): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:59:46] Arguments: --nthreads 8
[2025-06-03 06:59:46] Threads: 8
[2025-06-03 06:59:46] Checking for CVMFS
[2025-06-03 06:59:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:59:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:59:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:59:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:59:46] 2.12.6.0 2939844 21718 395340 146739 0 194 37797658 40960000 6144 16776704 1 109567961 99.666 99674797 27055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 06:59:46] CVMFS is ok
[2025-06-03 06:59:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:59:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:59:46] Further information can be found at the LHC@home message board.
[2025-06-03 06:59:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:59:46] Checking for apptainer binary...
[2025-06-03 06:59:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:59:46] Running /usr/bin/apptainer --version
[2025-06-03 06:59:46] apptainer version 1.4.1-1.el9
[2025-06-03 06:59:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:59:46] c7-11-15.aglt2.org
[2025-06-03 06:59:46] apptainer works
[2025-06-03 06:59:46] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:59:46] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:59:46] Starting ATLAS job with PandaID=6669238636
[2025-06-03 06:59:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:34:00]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:34:00]  is_tar=False
[2025-06-03 08:34:00]  lfn=log.44871837._095319.job.log.tgz.1
[2025-06-03 08:34:00]  mtime=0
[2025-06-03 08:34:00]  protocol_id=None
[2025-06-03 08:34:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 08:34:00]  replicas=None
[2025-06-03 08:34:00]  scope=mc23_13p6TeV
[2025-06-03 08:34:00]  status=None
[2025-06-03 08:34:00]  status_code=0
[2025-06-03 08:34:00]  storage_token=
[2025-06-03 08:34:00]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6669238636/log.44871837._095319.job.log.tgz.1
[2025-06-03 08:34:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/db/log.44871837._095319.job.log.tgz.1
[2025-06-03 08:34:00]  workdir=None
[2025-06-03 08:34:00] ]
[2025-06-03 08:34:00] 2025-06-03 12:33:35,828 | INFO     | transferring file log.44871837._095319.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6669238636/log.44871837._095319.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 08:34:00] 2025-06-03 12:33:35,829 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6669238636/log.44871837._095319.job.log.tgz.1 /tmp/boinchome/slots/5/log.44871837._095319.job
[2025-06-03 08:34:00] 2025-06-03 12:33:35,850 | INFO     | adding to output.list: log.44871837._095319.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/db/log.44871837._095319.job.log.tg
[2025-06-03 08:34:00] 2025-06-03 12:33:35,850 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 08:34:00] 2025-06-03 12:33:35,850 | INFO     | summary of transferred files:
[2025-06-03 08:34:00] 2025-06-03 12:33:35,850 | INFO     |  -- lfn=log.44871837._095319.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 08:34:00] 2025-06-03 12:33:35,851 | INFO     | stage-out finished correctly
[2025-06-03 08:34:00] 2025-06-03 12:33:35,932 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 08:34:00] 2025-06-03 12:33:36,013 | INFO     | job 6669238636 has state=finished
[2025-06-03 08:34:00] 2025-06-03 12:33:36,014 | INFO     | preparing for final server update for job 6669238636 in state='finished'
[2025-06-03 08:34:00] 2025-06-03 12:33:36,014 | INFO     | this job has now completed (state=finished)
[2025-06-03 08:34:00] 2025-06-03 12:33:36,014 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 08:34:00] 2025-06-03 12:33:36,014 | INFO     | log transfer has been attempted: DONE
[2025-06-03 08:34:00] 2025-06-03 12:33:36,014 | INFO     | job 6669238636 has finished - writing final server update
[2025-06-03 08:34:00] 2025-06-03 12:33:36,014 | INFO     | total number of processed events: 400 (read)
[2025-06-03 08:34:00] 2025-06-03 12:33:36,031 | INFO     | executing command: lscpu
[2025-06-03 08:34:00] 2025-06-03 12:33:36,100 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 08:34:00] 2025-06-03 12:33:37,516 | INFO     | monitor loop #413: job 0:6669238636 is in state 'finished'
[2025-06-03 08:34:00] 2025-06-03 12:33:37,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:34:00] 2025-06-03 12:33:39,903 | INFO     | PID=780156 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 08:34:00] 2025-06-03 12:33:39,903 | INFO     | .. there are 10 such processes running
[2025-06-03 08:34:00] 2025-06-03 12:33:40,019 | INFO     | monitor loop #414: job 0:6669238636 is in state 'finished'
[2025-06-03 08:34:00] 2025-06-03 12:33:40,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:34:00] 2025-06-03 12:33:40,160 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 08:34:00] 2025-06-03 12:33:40,160 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6669238636/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:34:00] 2025-06-03 12:33:40,161 | INFO     | extracted standard info from prmon json
[2025-06-03 08:34:00] 2025-06-03 12:33:40,161 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:34:00] 2025-06-03 12:33:40,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:34:00] 2025-06-03 12:33:40,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:34:00] 2025-06-03 12:33:40,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:34:00] 2025-06-03 12:33:40,163 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:34:00] 2025-06-03 12:33:40,163 | INFO     | sum of square deviations: 190403570.0
[2025-06-03 08:34:00] 2025-06-03 12:33:40,164 | INFO     | sum of deviations: 12643849846.999998
[2025-06-03 08:34:00] 2025-06-03 12:33:40,164 | INFO     | mean x: 1748951285.0
[2025-06-03 08:34:00] 2025-06-03 12:33:40,164 | INFO     | mean y: 2122741.094117647
[2025-06-03 08:34:00] 2025-06-03 12:33:40,164 | INFO     | -- intersect: -116137913064.20984
[2025-06-03 08:34:00] 2025-06-03 12:33:40,164 | INFO     | intersect: -116137913064.20984
[2025-06-03 08:34:00] 2025-06-03 12:33:40,164 | INFO     | chi2: 0.9566078830661252
[2025-06-03 08:34:00] 2025-06-03 12:33:40,165 | INFO     | -- intersect: -116137913064.20984
[2025-06-03 08:34:00] 2025-06-03 12:33:40,165 | INFO     | current memory leak: 66.41 B/s (using 85 data points, chi2=0.96)
[2025-06-03 08:34:00] 2025-06-03 12:33:40,165 | INFO     | ..............................
[2025-06-03 08:34:00] 2025-06-03 12:33:40,165 | INFO     | . Timing measurements:
[2025-06-03 08:34:00] 2025-06-03 12:33:40,165 | INFO     | . get job = 0 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,165 | INFO     | . initial setup = 2 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,166 | INFO     | . payload setup = 4 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,166 | INFO     | . stage-in = 0 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,166 | INFO     | . payload execution = 5598 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,166 | INFO     | . stage-out = 0 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,166 | INFO     | . log creation = 0 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,166 | INFO     | ..............................
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | 
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | job summary report
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | --------------------------------------------------
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | PanDA job id: 6669238636
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | task id: 44871837
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | errors: (none)
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | pilot state: finished 
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | transexitcode: 0
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | exeerrorcode: 0
[2025-06-03 08:34:00] 2025-06-03 12:33:40,457 | INFO     | exeerrordiag: 
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | exitcode: 0
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | exitmsg: OK
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | cpuconsumptiontime: 38936 s
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | nevents: 400
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | neventsw: 0
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | pid: 787393
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | pgrp: 787393
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | corecount: 8
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | event service: False
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | sizes: {0: 2405234, 4: 2405440, 11: 2405468, 5606: 2432053, 5607: 2441050, 5611: 2441164}
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | --------------------------------------------------
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | 
[2025-06-03 08:34:00] 2025-06-03 12:33:40,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-03 08:34:00] 2025-06-03 12:33:40,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:34:00] 2025-06-03 12:33:40,482 | INFO     | job 6669238636 has completed (purged errors)
[2025-06-03 08:34:00] 2025-06-03 12:33:40,483 | INFO     | overall cleanup function is called
[2025-06-03 08:34:00] 2025-06-03 12:33:41,491 | INFO     | --- collectZombieJob: --- 10, [787393]
[2025-06-03 08:34:00] 2025-06-03 12:33:41,492 | INFO     | zombie collector waiting for pid 787393
[2025-06-03 08:34:00] 2025-06-03 12:33:41,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:34:00] 2025-06-03 12:33:41,492 | INFO     | collected zombie processes
[2025-06-03 08:34:00] 2025-06-03 12:33:41,492 | INFO     | will attempt to kill all subprocesses of pid=787393
[2025-06-03 08:34:00] 2025-06-03 12:33:41,801 | INFO     | process IDs to be killed: [787393] (in reverse order)
[2025-06-03 08:34:00] 2025-06-03 12:33:41,912 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:34:00] 2025-06-03 12:33:41,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:34:00] 2025-06-03 12:33:41,925 | INFO     | did not find any defunct processes belonging to 787393
[2025-06-03 08:34:00] 2025-06-03 12:33:41,936 | INFO     | did not find any defunct processes belonging to 787393
[2025-06-03 08:34:00] 2025-06-03 12:33:41,937 | INFO     | ready for new job
[2025-06-03 08:34:00] 2025-06-03 12:33:41,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:34:00] 2025-06-03 12:33:41,938 | INFO     | **************************************
[2025-06-03 08:34:00] 2025-06-03 12:33:41,938 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:34:00] 2025-06-03 12:33:41,939 | INFO     | **************************************
[2025-06-03 08:34:00] 2025-06-03 12:33:41,939 | INFO     | 
[2025-06-03 08:34:00] 2025-06-03 12:33:41,954 | INFO     | architecture information:
[2025-06-03 08:34:00] 2025-06-03 12:33:41,955 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:34:00] 2025-06-03 12:33:41,977 | INFO     | cat /etc/os-release:
[2025-06-03 08:34:00] NAME="CentOS Linux"
[2025-06-03 08:34:00] VERSION="7 (Core)"
[2025-06-03 08:34:00] ID="centos"
[2025-06-03 08:34:00] ID_LIKE="rhel fedora"
[2025-06-03 08:34:00] VERSION_ID="7"
[2025-06-03 08:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:34:00] ANSI_COLOR="0;31"
[2025-06-03 08:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:34:00] HOME_URL="https://www.centos.org/"
[2025-06-03 08:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:34:00] 
[2025-06-03 08:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:34:00] 
[2025-06-03 08:34:00] 2025-06-03 12:33:41,977 | INFO     | **************************************
[2025-06-03 08:34:00] 2025-06-03 12:33:42,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-03 08:34:00] 2025-06-03 12:33:42,505 | INFO     | sufficient remaining disk space (82779832320 B)
[2025-06-03 08:34:00] 2025-06-03 12:33:42,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:34:00] 2025-06-03 12:33:42,505 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:34:00] 2025-06-03 12:33:42,506 | INFO     | update_server=False
[2025-06-03 08:34:00] 2025-06-03 12:33:42,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:34:00] 2025-06-03 12:33:42,506 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:34:00] 2025-06-03 12:33:42,506 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:34:00] 2025-06-03 12:33:42,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:34:00] 2025-06-03 12:33:42,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:34:00] 2025-06-03 12:33:42,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:34:00] 2025-06-03 12:33:42,522 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 08:34:00] 2025-06-03 12:33:42,522 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 08:34:00] 2025-06-03 12:33:42,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:34:00] 2025-06-03 12:33:42,522 | INFO     | will abort loop
[2025-06-03 08:34:00] 2025-06-03 12:33:42,736 | INFO     | all data control threads have been joined
[2025-06-03 08:34:00] 2025-06-03 12:33:42,976 | INFO     | all payload control threads have been joined
[2025-06-03 08:34:00] 2025-06-03 12:33:43,512 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:43,525 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:43,525 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:43,555 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:43,639 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:43,740 | INFO     | [data] control thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:43,932 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:43,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:34:00] 2025-06-03 12:33:43,970 | INFO     | all job control threads have been joined
[2025-06-03 08:34:00] 2025-06-03 12:33:43,981 | INFO     | [payload] control thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:44,236 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:44,738 | INFO     | [job] validate thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:44,774 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:44,975 | INFO     | [job] control thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:45,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:34:00] 2025-06-03 12:33:45,950 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:46,267 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:46,514 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:53,057 | INFO     | job.realtimelogging is not enabled
[2025-06-03 08:34:00] 2025-06-03 12:33:54,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:34:00] 2025-06-03 12:33:55,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898348549952)>', '<ExcThread(monitor, started 139897419593472)>']
[2025-06-03 08:34:00] 2025-06-03 12:33:56,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:34:00] 2025-06-03 12:33:56,572 | INFO     | [monitor] control thread has ended
[2025-06-03 08:34:00] 2025-06-03 12:34:00,649 | INFO     | all workflow threads have been joined
[2025-06-03 08:34:00] 2025-06-03 12:34:00,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:34:00] 2025-06-03 12:34:00,649 | INFO     | traces error code: 0
[2025-06-03 08:34:00] 2025-06-03 12:34:00,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:34:00] 2025-06-03 12:34:00,748 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:34:00] 2025-06-03 12:34:00,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:34:00] 2025-06-03 12:34:00,754 [wrapper] pilotpid: 780156
[2025-06-03 08:34:00] 2025-06-03 12:34:00,761 [wrapper] Pilot exit status: 0
[2025-06-03 08:34:00] 2025-06-03 12:34:00,775 [wrapper] pandaids: 6669238636
[2025-06-03 08:34:00] 2025-06-03 12:34:00,842 [wrapper] cleanup supervisor_pilot 1128329 780157
[2025-06-03 08:34:00] 2025-06-03 12:34:00,845 [wrapper] Test setup, not cleaning
[2025-06-03 08:34:00] 2025-06-03 12:34:00,848 [wrapper] apfmon messages muted
[2025-06-03 08:34:00] 2025-06-03 12:34:00,851 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:34:00] 2025-06-03 12:34:00,854 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:34:00]  *** Error codes and diagnostics ***
[2025-06-03 08:34:00]     "exeErrorCode": 0,
[2025-06-03 08:34:00]     "exeErrorDiag": "",
[2025-06-03 08:34:00]     "pilotErrorCode": 0,
[2025-06-03 08:34:00]     "pilotErrorDiag": "",
[2025-06-03 08:34:00]  *** Listing of results directory ***
[2025-06-03 08:34:00] total 415712
[2025-06-03 08:34:00] -rwx------. 1 boincer umatlas     37140 May 29 00:58 runpilot2-wrapper.sh
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas      5111 May 29 00:58 queuedata.json
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:58 pilot3.tar.gz
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas       100 Jun  3 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:34:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 06:59 run_atlas
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas       105 Jun  3 06:59 job.xml
[2025-06-03 08:34:00] -rw-r--r--. 2 boincer umatlas 223912544 Jun  3 06:59 EVNT.44871834._003743.pool.root.1
[2025-06-03 08:34:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:59 start_atlas.sh
[2025-06-03 08:34:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 06:59 shared
[2025-06-03 08:34:00] -rw-r--r--. 2 boincer umatlas    508867 Jun  3 06:59 input.tar.gz
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas         0 Jun  3 06:59 boinc_lockfile
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 06:59 pandaJob.out
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas    984355 Jun  3 06:59 agis_schedconf.cvmfs.json
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas   1603667 Jun  3 06:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:34:00] drwx------. 4 boincer umatlas      4096 Jun  3 06:59 pilot3
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas      6898 Jun  3 08:30 init_data.xml
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas 196213759 Jun  3 08:33 HITS.44871837._095319.pool.root.1
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas       529 Jun  3 08:33 boinc_task_state.xml
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas      1039 Jun  3 08:33 memory_monitor_summary.json
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas    321773 Jun  3 08:33 log.44871837._095319.job.log.tgz.1
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas      7683 Jun  3 08:33 heartbeat.json
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas        95 Jun  3 08:33 pilot_heartbeat.json
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 08:33 boinc_mmap_file
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas        27 Jun  3 08:33 wrapper_checkpoint.txt
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas      4734 Jun  3 08:34 pilotlog.txt
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas    544289 Jun  3 08:34 log.44871837._095319.job.log.1
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas       357 Jun  3 08:34 output.list
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas       620 Jun  3 08:34 runtime_log
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas    880640 Jun  3 08:34 result.tar.gz
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas       651 Jun  3 08:34 Ym7LDmhWke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeodKDm8nLaHm.diag
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas      8659 Jun  3 08:34 runtime_log.err
[2025-06-03 08:34:00] -rw-r--r--. 1 boincer umatlas     21519 Jun  3 08:34 stderr.txt
[2025-06-03 08:34:00] HITS file was successfully produced:
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas 196213759 Jun  3 08:33 shared/HITS.pool.root.1
[2025-06-03 08:34:00]  *** Contents of shared directory: ***
[2025-06-03 08:34:00] total 411668
[2025-06-03 08:34:00] -rw-r--r--. 2 boincer umatlas 223912544 Jun  3 06:59 ATLAS.root_0
[2025-06-03 08:34:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:59 start_atlas.sh
[2025-06-03 08:34:00] -rw-r--r--. 2 boincer umatlas    508867 Jun  3 06:59 input.tar.gz
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas 196213759 Jun  3 08:33 HITS.pool.root.1
[2025-06-03 08:34:00] -rw-------. 1 boincer umatlas    880640 Jun  3 08:34 result.tar.gz
08:34:02 (776558): run_atlas exited; CPU time 39038.881714
08:34:02 (776558): called boinc_finish(0)

</stderr_txt>
]]>

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