Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:29:11 (17411): wrapper (7.7.26015): starting
03:29:11 (17411): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:29:11] Arguments: --nthreads 8
[2025-06-04 03:29:11] Threads: 8
[2025-06-04 03:29:11] Checking for CVMFS
[2025-06-04 03:29:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:29:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:29:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:29:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:29:12] 2.11.2.0 23601 32564 98860 146762 1 155 20879561 25165825 4189 130560 0 16860247 99.802 19063756 2128 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 03:29:12] CVMFS is ok
[2025-06-04 03:29:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:29:12] Checking for apptainer binary...
[2025-06-04 03:29:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:29:12] Running /usr/bin/apptainer --version
[2025-06-04 03:29:12] apptainer version 1.3.2-1.el7
[2025-06-04 03:29:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:29:13] cg-vwn275.simple-grid.lan
[2025-06-04 03:29:13] apptainer works
[2025-06-04 03:29:13] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:29:13] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:29:13] Starting ATLAS job with PandaID=6677520205
[2025-06-04 03:29:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:20:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:20:03] 2025-06-04 05:17:16,437 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:20:03] 2025-06-04 05:17:16,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:20:03] 2025-06-04 05:17:16,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:20:03] 2025-06-04 05:17:16,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:20:03] 2025-06-04 05:17:16,443 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:20:03] 2025-06-04 05:17:16,444 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,451 | INFO     | sum of deviations: 15823646562.00001
[2025-06-04 07:20:03] 2025-06-04 05:17:16,452 | INFO     | mean x: 1749007376.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,452 | INFO     | mean y: 2464359.4253393663
[2025-06-04 07:20:03] 2025-06-04 05:17:16,452 | INFO     | -- intersect: -8266514126.852901
[2025-06-04 07:20:03] 2025-06-04 05:17:16,452 | INFO     | intersect: -8266514126.852901
[2025-06-04 07:20:03] 2025-06-04 05:17:16,453 | INFO     | chi2: 2.6557634620044746
[2025-06-04 07:20:03] 2025-06-04 05:17:16,453 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,455 | INFO     | sum of deviations: 29706955591.999996
[2025-06-04 07:20:03] 2025-06-04 05:17:16,455 | INFO     | mean x: 1749007223.5
[2025-06-04 07:20:03] 2025-06-04 05:17:16,455 | INFO     | mean y: 2473709.314814815
[2025-06-04 07:20:03] 2025-06-04 05:17:16,455 | INFO     | -- intersect: -16624736265.84176
[2025-06-04 07:20:03] 2025-06-04 05:17:16,455 | INFO     | intersect: -16624736265.84176
[2025-06-04 07:20:03] 2025-06-04 05:17:16,456 | INFO     | chi2: 1.8884928575951099
[2025-06-04 07:20:03] 2025-06-04 05:17:16,456 | INFO     | current chi2=1.8884928575951099 (change=28.8907734211486 %)
[2025-06-04 07:20:03] 2025-06-04 05:17:16,456 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,458 | INFO     | sum of deviations: 28693553930.000004
[2025-06-04 07:20:03] 2025-06-04 05:17:16,458 | INFO     | mean x: 1749007071.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,459 | INFO     | mean y: 2472980.194312796
[2025-06-04 07:20:03] 2025-06-04 05:17:16,459 | INFO     | -- intersect: -17226519157.845703
[2025-06-04 07:20:03] 2025-06-04 05:17:16,459 | INFO     | intersect: -17226519157.845703
[2025-06-04 07:20:03] 2025-06-04 05:17:16,459 | INFO     | chi2: 1.8898215746118259
[2025-06-04 07:20:03] 2025-06-04 05:17:16,459 | INFO     | current chi2=1.8898215746118259 (change=-0.07035859369931871 %)
[2025-06-04 07:20:03] 2025-06-04 05:17:16,459 | INFO     | right removable region: 210
[2025-06-04 07:20:03] 2025-06-04 05:17:16,460 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,462 | INFO     | sum of deviations: -25163095848.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,462 | INFO     | mean x: 1749007528.5
[2025-06-04 07:20:03] 2025-06-04 05:17:16,462 | INFO     | mean y: 2492284.685185185
[2025-06-04 07:20:03] 2025-06-04 05:17:16,462 | INFO     | -- intersect: 14086471706.780918
[2025-06-04 07:20:03] 2025-06-04 05:17:16,462 | INFO     | intersect: 14086471706.780918
[2025-06-04 07:20:03] 2025-06-04 05:17:16,463 | INFO     | chi2: 0.8928283026505005
[2025-06-04 07:20:03] 2025-06-04 05:17:16,463 | INFO     | current chi2=0.8928283026505005 (change=66.38148255957155 %)
[2025-06-04 07:20:03] 2025-06-04 05:17:16,463 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,465 | INFO     | sum of deviations: -24568837629.999996
[2025-06-04 07:20:03] 2025-06-04 05:17:16,465 | INFO     | mean x: 1749007681.0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,465 | INFO     | mean y: 2491814.81042654
[2025-06-04 07:20:03] 2025-06-04 05:17:16,465 | INFO     | -- intersect: 14754810716.59159
[2025-06-04 07:20:03] 2025-06-04 05:17:16,465 | INFO     | intersect: 14754810716.59159
[2025-06-04 07:20:03] 2025-06-04 05:17:16,466 | INFO     | chi2: 0.8758536305218125
[2025-06-04 07:20:03] 2025-06-04 05:17:16,466 | INFO     | current chi2=0.8758536305218125 (change=1.901224689931536 %)
[2025-06-04 07:20:03] 2025-06-04 05:17:16,466 | INFO     | left removable region: 20
[2025-06-04 07:20:03] 2025-06-04 05:17:16,467 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 07:20:03] 2025-06-04 05:17:16,468 | INFO     | sum of deviations: 3526031494.9999995
[2025-06-04 07:20:03] 2025-06-04 05:17:16,468 | INFO     | mean x: 1749007650.5
[2025-06-04 07:20:03] 2025-06-04 05:17:16,468 | INFO     | mean y: 2490087.452631579
[2025-06-04 07:20:03] 2025-06-04 05:17:16,468 | INFO     | -- intersect: -2897194098.061468
[2025-06-04 07:20:03] 2025-06-04 05:17:16,469 | INFO     | intersect: -2897194098.061468
[2025-06-04 07:20:03] 2025-06-04 05:17:16,469 | INFO     | chi2: 0.00018266772017981738
[2025-06-04 07:20:03] 2025-06-04 05:17:16,469 | INFO     | -- intersect: -2897194098.061468
[2025-06-04 07:20:03] 2025-06-04 05:17:16,469 | INFO     | current memory leak: 1.66 B/s (using 190 data points, chi2=0.00)
[2025-06-04 07:20:03] 2025-06-04 05:17:16,475 | INFO     | ..............................
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . Timing measurements:
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . get job = 0 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . initial setup = 2 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . payload setup = 35 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . stage-in = 0 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . payload execution = 13506 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . stage-out = 4 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | . log creation = 1 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,476 | INFO     | ..............................
[2025-06-04 07:20:03] 2025-06-04 05:17:16,611 | INFO     | 
[2025-06-04 07:20:03] 2025-06-04 05:17:16,611 | INFO     | job summary report
[2025-06-04 07:20:03] 2025-06-04 05:17:16,611 | INFO     | --------------------------------------------------
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | PanDA job id: 6677520205
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | task id: 45006595
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | errors: (none)
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | pilot state: finished 
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | transexitcode: 0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | exeerrorcode: 0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | exeerrordiag: 
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | exitcode: 0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | exitmsg: OK
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | cpuconsumptiontime: 50913 s
[2025-06-04 07:20:03] 2025-06-04 05:17:16,612 | INFO     | nevents: 400
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | neventsw: 0
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | pid: 582
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | pgrp: 582
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | corecount: 8
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | event service: False
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | sizes: {0: 2405182, 1: 2405182, 10: 2405416, 12: 2405444, 13545: 2435113, 13546: 2435112, 13551: 2444237, 13554: 2444293, 13642: 2444463}
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | --------------------------------------------------
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | 
[2025-06-04 07:20:03] 2025-06-04 05:17:16,613 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 07:20:03] 2025-06-04 05:17:17,086 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,086 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:20:03] 2025-06-04 05:17:17,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,088 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:20:03] 2025-06-04 05:17:17,088 | INFO     | job 6677520205 has completed (purged errors)
[2025-06-04 07:20:03] 2025-06-04 05:17:17,088 | INFO     | overall cleanup function is called
[2025-06-04 07:20:03] 2025-06-04 05:17:18,096 | INFO     | --- collectZombieJob: --- 10, [582]
[2025-06-04 07:20:03] 2025-06-04 05:17:18,096 | INFO     | zombie collector waiting for pid 582
[2025-06-04 07:20:03] 2025-06-04 05:17:18,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:20:03] 2025-06-04 05:17:18,097 | INFO     | collected zombie processes
[2025-06-04 07:20:03] 2025-06-04 05:17:18,097 | INFO     | will attempt to kill all subprocesses of pid=582
[2025-06-04 07:20:03] 2025-06-04 05:17:18,338 | INFO     | process IDs to be killed: [582] (in reverse order)
[2025-06-04 07:20:03] 2025-06-04 05:17:18,379 | INFO     | PID=21106 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 07:20:03] 2025-06-04 05:17:18,380 | INFO     | .. there are 9 such processes running
[2025-06-04 07:20:03] 2025-06-04 05:17:19,095 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:20:03] 2025-06-04 05:17:19,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:20:03] 2025-06-04 05:17:19,098 | INFO     | did not find any defunct processes belonging to 582
[2025-06-04 07:20:03] 2025-06-04 05:17:19,102 | INFO     | did not find any defunct processes belonging to 582
[2025-06-04 07:20:03] 2025-06-04 05:17:19,102 | INFO     | ready for new job
[2025-06-04 07:20:03] 2025-06-04 05:17:19,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:20:03] 2025-06-04 05:17:19,104 | INFO     | **************************************
[2025-06-04 07:20:03] 2025-06-04 05:17:19,105 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:20:03] 2025-06-04 05:17:19,105 | INFO     | **************************************
[2025-06-04 07:20:03] 2025-06-04 05:17:19,105 | INFO     | 
[2025-06-04 07:20:03] 2025-06-04 05:17:19,105 | INFO     | pilot is running in a VM
[2025-06-04 07:20:03] 2025-06-04 05:17:19,105 | INFO     | architecture information:
[2025-06-04 07:20:03] 2025-06-04 05:17:19,115 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:20:03] 2025-06-04 05:17:19,269 | INFO     | cat /etc/os-release:
[2025-06-04 07:20:03] NAME="CentOS Linux"
[2025-06-04 07:20:03] VERSION="7 (Core)"
[2025-06-04 07:20:03] ID="centos"
[2025-06-04 07:20:03] ID_LIKE="rhel fedora"
[2025-06-04 07:20:03] VERSION_ID="7"
[2025-06-04 07:20:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:20:03] ANSI_COLOR="0;31"
[2025-06-04 07:20:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:20:03] HOME_URL="https://www.centos.org/"
[2025-06-04 07:20:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:20:03] 
[2025-06-04 07:20:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:20:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:20:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:20:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:20:03] 
[2025-06-04 07:20:03] 2025-06-04 05:17:19,270 | INFO     | **************************************
[2025-06-04 07:20:03] 2025-06-04 05:17:19,773 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 07:20:03] 2025-06-04 05:17:19,974 | INFO     | sufficient remaining disk space (496602447872 B)
[2025-06-04 07:20:03] 2025-06-04 05:17:19,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:20:03] 2025-06-04 05:17:19,974 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:20:03] 2025-06-04 05:17:19,974 | INFO     | update_server=False
[2025-06-04 07:20:03] 2025-06-04 05:17:19,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:20:03] 2025-06-04 05:17:20,387 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:20:03] 2025-06-04 05:17:20,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:20:03] 2025-06-04 05:17:20,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:20:03] 2025-06-04 05:17:20,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:20:03] 2025-06-04 05:17:20,462 | INFO     | all data control threads have been joined
[2025-06-04 07:20:03] 2025-06-04 05:17:20,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:20:03] 2025-06-04 05:17:20,573 | INFO     | aborting loop
[2025-06-04 07:20:03] 2025-06-04 05:17:20,982 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:21,105 | INFO     | all job control threads have been joined
[2025-06-04 07:20:03] 2025-06-04 05:17:21,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:20:03] 2025-06-04 05:17:21,422 | INFO     | all payload control threads have been joined
[2025-06-04 07:20:03] 2025-06-04 05:17:21,468 | INFO     | [data] control thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:21,557 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:21,578 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:21,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:20:03] 2025-06-04 05:17:21,637 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:21,652 | INFO     | [job] validate thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:21,780 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:21,876 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:22,112 | INFO     | [job] control thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:22,127 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:22,363 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:22,428 | INFO     | [payload] control thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:22,521 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:22,631 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:23,385 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:24,422 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:20:03] 2025-06-04 05:17:25,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643117094720)>', '<ExcThread(monitor, started 139642890196736)>']
[2025-06-04 07:20:03] 2025-06-04 05:17:26,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:20:03] 2025-06-04 05:17:26,424 | INFO     | [monitor] control thread has ended
[2025-06-04 07:20:03] 2025-06-04 05:17:30,569 | INFO     | all workflow threads have been joined
[2025-06-04 07:20:03] 2025-06-04 05:17:30,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:20:03] 2025-06-04 05:17:30,570 | INFO     | traces error code: 0
[2025-06-04 07:20:03] 2025-06-04 05:17:30,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:20:03] 2025-06-04 05:17:31,071 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:20:03] 2025-06-04 05:17:31,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:20:03] 2025-06-04 05:17:31,247 [wrapper] pilotpid: 21106
[2025-06-04 07:20:03] 2025-06-04 05:17:31,341 [wrapper] Pilot exit status: 0
[2025-06-04 07:20:03] 2025-06-04 05:17:31,751 [wrapper] pandaids: 6677520205
[2025-06-04 07:20:03] 2025-06-04 05:17:32,246 [wrapper] cleanup supervisor_pilot 27223 21107
[2025-06-04 07:20:03] 2025-06-04 05:17:32,349 [wrapper] Test setup, not cleaning
[2025-06-04 07:20:03] 2025-06-04 05:17:32,452 [wrapper] apfmon messages muted
[2025-06-04 07:20:03] 2025-06-04 05:17:32,494 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:20:03] 2025-06-04 05:17:32,553 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:20:03]  *** Error codes and diagnostics ***
[2025-06-04 07:20:03]     "exeErrorCode": 0,
[2025-06-04 07:20:03]     "exeErrorDiag": "",
[2025-06-04 07:20:03]     "pilotErrorCode": 0,
[2025-06-04 07:20:03]     "pilotErrorDiag": "",
[2025-06-04 07:20:03]  *** Listing of results directory ***
[2025-06-04 07:20:03] total 389816
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc    495897 Jun  3 09:38 pilot3.tar.gz
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc      5111 Jun  3 10:01 queuedata.json
[2025-06-04 07:20:03] -rwx------. 1 boinc boinc     37140 Jun  3 10:02 runpilot2-wrapper.sh
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:20:03] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:29 run_atlas
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:29 job.xml
[2025-06-04 07:20:03] -rw-r--r--. 2 boinc boinc 214579321 Jun  4 03:29 EVNT.45006593._000999.pool.root.1
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc      6390 Jun  4 03:29 init_data.xml
[2025-06-04 07:20:03] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:29 start_atlas.sh
[2025-06-04 07:20:03] drwxrwx--x. 2 boinc boinc        68 Jun  4 03:29 shared
[2025-06-04 07:20:03] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:29 input.tar.gz
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:29 boinc_lockfile
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc      2524 Jun  4 03:29 pandaJob.out
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc    986069 Jun  4 03:29 agis_schedconf.cvmfs.json
[2025-06-04 07:20:03] drwx------. 4 boinc boinc      4096 Jun  4 03:29 pilot3
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc 177637690 Jun  4 07:14 HITS.45006595._024977.pool.root.1
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc       531 Jun  4 07:14 boinc_task_state.xml
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc      1031 Jun  4 07:15 memory_monitor_summary.json
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc   1603667 Jun  4 07:15 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc    383452 Jun  4 07:15 log.45006595._024977.job.log.tgz.1
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc        95 Jun  4 07:16 pilot_heartbeat.json
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc      7684 Jun  4 07:17 heartbeat.json
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc      4416 Jun  4 07:17 pilotlog.txt
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc   1179696 Jun  4 07:17 log.45006595._024977.job.log.1
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc       357 Jun  4 07:17 output.list
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc       620 Jun  4 07:17 runtime_log
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc   1587200 Jun  4 07:17 result.tar.gz
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc       656 Jun  4 07:17 Y05LDmjmbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXqiKDm8cGdVm.diag
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc      8659 Jun  4 07:17 runtime_log.err
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc      8192 Jun  4 07:20 boinc_mmap_file
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc        28 Jun  4 07:20 wrapper_checkpoint.txt
[2025-06-04 07:20:03] -rw-r--r--. 1 boinc boinc     20557 Jun  4 07:20 stderr.txt
[2025-06-04 07:20:03] HITS file was successfully produced:
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc 177637690 Jun  4 07:14 shared/HITS.pool.root.1
[2025-06-04 07:20:03]  *** Contents of shared directory: ***
[2025-06-04 07:20:03] total 385096
[2025-06-04 07:20:03] -rw-r--r--. 2 boinc boinc 214579321 Jun  4 03:29 ATLAS.root_0
[2025-06-04 07:20:03] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:29 start_atlas.sh
[2025-06-04 07:20:03] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:29 input.tar.gz
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc 177637690 Jun  4 07:14 HITS.pool.root.1
[2025-06-04 07:20:03] -rw-------. 1 boinc boinc   1587200 Jun  4 07:17 result.tar.gz
07:20:05 (17411): run_atlas exited; CPU time 51097.354987
07:20:05 (17411): called boinc_finish(0)

</stderr_txt>
]]>

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