Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:55:40 (196877): wrapper (7.7.26015): starting
06:55:40 (196877): wrapper: running run_atlas (--nthreads 9)
[2025-06-03 06:55:40] Arguments: --nthreads 9
[2025-06-03 06:55:40] Threads: 9
[2025-06-03 06:55:40] Checking for CVMFS
[2025-06-03 06:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:55:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:55:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:55:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:55:41] 2.11.2.0 6617 27250 248876 146739 3 203 14736177 18432000 2197 130560 0 59343946 99.308 75028794 29578 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 06:55:41] CVMFS is ok
[2025-06-03 06:55:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:55:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:55:41] Further information can be found at the LHC@home message board.
[2025-06-03 06:55:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:55:41] Checking for apptainer binary...
[2025-06-03 06:55:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:55:41] Running /usr/bin/apptainer --version
[2025-06-03 06:55:41] apptainer version 1.3.2-1.el7
[2025-06-03 06:55:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:55:42] c-210-33-4.aglt2.org
[2025-06-03 06:55:42] apptainer works
[2025-06-03 06:55:42] Set ATHENA_PROC_NUMBER=9
[2025-06-03 06:55:42] Set ATHENA_CORE_NUMBER=9
[2025-06-03 06:55:42] Starting ATLAS job with PandaID=6666452511
[2025-06-03 06:55:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:23:59]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:23:59]  is_tar=False
[2025-06-03 08:23:59]  lfn=log.44871837._058385.job.log.tgz.1
[2025-06-03 08:23:59]  mtime=0
[2025-06-03 08:23:59]  protocol_id=None
[2025-06-03 08:23:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 08:23:59]  replicas=None
[2025-06-03 08:23:59]  scope=mc23_13p6TeV
[2025-06-03 08:23:59]  status=None
[2025-06-03 08:23:59]  status_code=0
[2025-06-03 08:23:59]  storage_token=
[2025-06-03 08:23:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666452511/log.44871837._058385.job.log.tgz.1
[2025-06-03 08:23:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/90/log.44871837._058385.job.log.tgz.1
[2025-06-03 08:23:59]  workdir=None
[2025-06-03 08:23:59] ]
[2025-06-03 08:23:59] 2025-06-03 12:23:32,724 | INFO     | transferring file log.44871837._058385.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666452511/log.44871837._058385.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 08:23:59] 2025-06-03 12:23:32,724 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666452511/log.44871837._058385.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._058385.job
[2025-06-03 08:23:59] 2025-06-03 12:23:32,745 | INFO     | adding to output.list: log.44871837._058385.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/90/log.44871837._058385.job.log.tg
[2025-06-03 08:23:59] 2025-06-03 12:23:32,745 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 08:23:59] 2025-06-03 12:23:32,745 | INFO     | summary of transferred files:
[2025-06-03 08:23:59] 2025-06-03 12:23:32,746 | INFO     |  -- lfn=log.44871837._058385.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 08:23:59] 2025-06-03 12:23:32,746 | INFO     | stage-out finished correctly
[2025-06-03 08:23:59] 2025-06-03 12:23:34,317 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 08:23:59] 2025-06-03 12:23:34,370 | INFO     | job 6666452511 has state=finished
[2025-06-03 08:23:59] 2025-06-03 12:23:34,370 | INFO     | preparing for final server update for job 6666452511 in state='finished'
[2025-06-03 08:23:59] 2025-06-03 12:23:34,371 | INFO     | this job has now completed (state=finished)
[2025-06-03 08:23:59] 2025-06-03 12:23:34,371 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 08:23:59] 2025-06-03 12:23:34,371 | INFO     | log transfer has been attempted: DONE
[2025-06-03 08:23:59] 2025-06-03 12:23:34,371 | INFO     | job 6666452511 has finished - writing final server update
[2025-06-03 08:23:59] 2025-06-03 12:23:34,372 | INFO     | total number of processed events: 400 (read)
[2025-06-03 08:23:59] 2025-06-03 12:23:34,379 | INFO     | executing command: lscpu
[2025-06-03 08:23:59] 2025-06-03 12:23:34,434 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 08:23:59] 2025-06-03 12:23:34,926 | INFO     | monitor loop #402: job 0:6666452511 is in state 'finished'
[2025-06-03 08:23:59] 2025-06-03 12:23:34,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:23:59] 2025-06-03 12:23:37,428 | INFO     | monitor loop #403: job 0:6666452511 is in state 'finished'
[2025-06-03 08:23:59] 2025-06-03 12:23:37,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:23:59] 2025-06-03 12:23:39,931 | INFO     | monitor loop #404: job 0:6666452511 is in state 'finished'
[2025-06-03 08:23:59] 2025-06-03 12:23:39,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:23:59] 2025-06-03 12:23:40,245 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 08:23:59] 2025-06-03 12:23:40,246 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666452511/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:23:59] 2025-06-03 12:23:40,247 | INFO     | extracted standard info from prmon json
[2025-06-03 08:23:59] 2025-06-03 12:23:40,247 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:23:59] 2025-06-03 12:23:40,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:23:59] 2025-06-03 12:23:40,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:23:59] 2025-06-03 12:23:40,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:23:59] 2025-06-03 12:23:40,251 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:23:59] 2025-06-03 12:23:40,251 | INFO     | sum of square deviations: 152858680.0
[2025-06-03 08:23:59] 2025-06-03 12:23:40,252 | INFO     | sum of deviations: -85636192.00000018
[2025-06-03 08:23:59] 2025-06-03 12:23:40,252 | INFO     | mean x: 1748950862.0
[2025-06-03 08:23:59] 2025-06-03 12:23:40,252 | INFO     | mean y: 2542541.405063291
[2025-06-03 08:23:59] 2025-06-03 12:23:40,252 | INFO     | -- intersect: 982359270.2738316
[2025-06-03 08:23:59] 2025-06-03 12:23:40,252 | INFO     | intersect: 982359270.2738316
[2025-06-03 08:23:59] 2025-06-03 12:23:40,252 | INFO     | chi2: 0.0024898887332055427
[2025-06-03 08:23:59] 2025-06-03 12:23:40,252 | INFO     | -- intersect: 982359270.2738316
[2025-06-03 08:23:59] 2025-06-03 12:23:40,253 | INFO     | current memory leak: -0.56 B/s (using 79 data points, chi2=0.00)
[2025-06-03 08:23:59] 2025-06-03 12:23:40,253 | INFO     | ..............................
[2025-06-03 08:23:59] 2025-06-03 12:23:40,253 | INFO     | . Timing measurements:
[2025-06-03 08:23:59] 2025-06-03 12:23:40,253 | INFO     | . get job = 0 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,253 | INFO     | . initial setup = 2 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,253 | INFO     | . payload setup = 6 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,253 | INFO     | . stage-in = 0 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,254 | INFO     | . payload execution = 5233 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,254 | INFO     | . stage-out = 0 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,254 | INFO     | . log creation = 0 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,254 | INFO     | ..............................
[2025-06-03 08:23:59] 2025-06-03 12:23:40,301 | INFO     | 
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | job summary report
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | --------------------------------------------------
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | PanDA job id: 6666452511
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | task id: 44871837
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | errors: (none)
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | pilot state: finished 
[2025-06-03 08:23:59] 2025-06-03 12:23:40,302 | INFO     | transexitcode: 0
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | exeerrorcode: 0
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | exeerrordiag: 
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | exitcode: 0
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | exitmsg: OK
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | cpuconsumptiontime: 44510 s
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | nevents: 400
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | neventsw: 0
[2025-06-03 08:23:59] 2025-06-03 12:23:40,303 | INFO     | pid: 206895
[2025-06-03 08:23:59] 2025-06-03 12:23:40,304 | INFO     | pgrp: 206895
[2025-06-03 08:23:59] 2025-06-03 12:23:40,304 | INFO     | corecount: 9
[2025-06-03 08:23:59] 2025-06-03 12:23:40,304 | INFO     | event service: False
[2025-06-03 08:23:59] 2025-06-03 12:23:40,304 | INFO     | sizes: {0: 2405007, 1: 2405262, 5: 2405468, 12: 2405524, 5244: 2432078, 5246: 2441019, 5247: 2441203, 5253: 2441373}
[2025-06-03 08:23:59] 2025-06-03 12:23:40,304 | INFO     | --------------------------------------------------
[2025-06-03 08:23:59] 2025-06-03 12:23:40,304 | INFO     | 
[2025-06-03 08:23:59] 2025-06-03 12:23:40,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 08:23:59] 2025-06-03 12:23:40,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,325 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:23:59] 2025-06-03 12:23:40,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:23:59] 2025-06-03 12:23:40,325 | INFO     | job 6666452511 has completed (purged errors)
[2025-06-03 08:23:59] 2025-06-03 12:23:40,325 | INFO     | overall cleanup function is called
[2025-06-03 08:23:59] 2025-06-03 12:23:41,330 | INFO     | --- collectZombieJob: --- 10, [206895]
[2025-06-03 08:23:59] 2025-06-03 12:23:41,331 | INFO     | zombie collector waiting for pid 206895
[2025-06-03 08:23:59] 2025-06-03 12:23:41,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:23:59] 2025-06-03 12:23:41,331 | INFO     | collected zombie processes
[2025-06-03 08:23:59] 2025-06-03 12:23:41,331 | INFO     | will attempt to kill all subprocesses of pid=206895
[2025-06-03 08:23:59] 2025-06-03 12:23:41,429 | INFO     | process IDs to be killed: [206895] (in reverse order)
[2025-06-03 08:23:59] 2025-06-03 12:23:41,500 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:23:59] 2025-06-03 12:23:41,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:23:59] 2025-06-03 12:23:41,508 | INFO     | did not find any defunct processes belonging to 206895
[2025-06-03 08:23:59] 2025-06-03 12:23:41,513 | INFO     | did not find any defunct processes belonging to 206895
[2025-06-03 08:23:59] 2025-06-03 12:23:41,514 | INFO     | ready for new job
[2025-06-03 08:23:59] 2025-06-03 12:23:41,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:23:59] 2025-06-03 12:23:41,515 | INFO     | **************************************
[2025-06-03 08:23:59] 2025-06-03 12:23:41,515 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:23:59] 2025-06-03 12:23:41,515 | INFO     | **************************************
[2025-06-03 08:23:59] 2025-06-03 12:23:41,515 | INFO     | 
[2025-06-03 08:23:59] 2025-06-03 12:23:41,517 | INFO     | architecture information:
[2025-06-03 08:23:59] 2025-06-03 12:23:41,518 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:23:59] 2025-06-03 12:23:41,534 | INFO     | cat /etc/os-release:
[2025-06-03 08:23:59] NAME="CentOS Linux"
[2025-06-03 08:23:59] VERSION="7 (Core)"
[2025-06-03 08:23:59] ID="centos"
[2025-06-03 08:23:59] ID_LIKE="rhel fedora"
[2025-06-03 08:23:59] VERSION_ID="7"
[2025-06-03 08:23:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:23:59] ANSI_COLOR="0;31"
[2025-06-03 08:23:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:23:59] HOME_URL="https://www.centos.org/"
[2025-06-03 08:23:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:23:59] 
[2025-06-03 08:23:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:23:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:23:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:23:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:23:59] 
[2025-06-03 08:23:59] 2025-06-03 12:23:41,534 | INFO     | **************************************
[2025-06-03 08:23:59] 2025-06-03 12:23:42,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 08:23:59] 2025-06-03 12:23:42,059 | INFO     | sufficient remaining disk space (56227790848 B)
[2025-06-03 08:23:59] 2025-06-03 12:23:42,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:23:59] 2025-06-03 12:23:42,060 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:23:59] 2025-06-03 12:23:42,060 | INFO     | update_server=False
[2025-06-03 08:23:59] 2025-06-03 12:23:42,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:23:59] 2025-06-03 12:23:42,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:23:59] 2025-06-03 12:23:42,061 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:23:59] 2025-06-03 12:23:42,062 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:23:59] 2025-06-03 12:23:42,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:23:59] 2025-06-03 12:23:42,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:23:59] 2025-06-03 12:23:42,435 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 08:23:59] 2025-06-03 12:23:42,435 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 08:23:59] 2025-06-03 12:23:42,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:23:59] 2025-06-03 12:23:42,436 | INFO     | will abort loop
[2025-06-03 08:23:59] 2025-06-03 12:23:42,663 | INFO     | all payload control threads have been joined
[2025-06-03 08:23:59] 2025-06-03 12:23:43,012 | INFO     | all data control threads have been joined
[2025-06-03 08:23:59] 2025-06-03 12:23:43,065 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,066 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,067 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,070 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,234 | INFO     | all job control threads have been joined
[2025-06-03 08:23:59] 2025-06-03 12:23:43,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:23:59] 2025-06-03 12:23:43,441 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,668 | INFO     | [payload] control thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,744 | INFO     | [job] validate thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,820 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:43,914 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:44,018 | INFO     | [data] control thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:44,025 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:44,239 | INFO     | [job] control thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:44,458 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:44,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:23:59] 2025-06-03 12:23:45,314 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:48,886 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:52,504 | INFO     | job.realtimelogging is not enabled
[2025-06-03 08:23:59] 2025-06-03 12:23:53,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:23:59] 2025-06-03 12:23:53,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140570112894784)>', '<ExcThread(monitor, started 140569313539840)>']
[2025-06-03 08:23:59] 2025-06-03 12:23:54,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:23:59] 2025-06-03 12:23:54,121 | INFO     | [monitor] control thread has ended
[2025-06-03 08:23:59] 2025-06-03 12:23:58,803 | INFO     | all workflow threads have been joined
[2025-06-03 08:23:59] 2025-06-03 12:23:58,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:23:59] 2025-06-03 12:23:58,804 | INFO     | traces error code: 0
[2025-06-03 08:23:59] 2025-06-03 12:23:58,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:23:59] 2025-06-03 12:23:58,885 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:23:59] 2025-06-03 12:23:58,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:23:59] 2025-06-03 12:23:58,891 [wrapper] pilotpid: 200451
[2025-06-03 08:23:59] 2025-06-03 12:23:58,894 [wrapper] Pilot exit status: 0
[2025-06-03 08:23:59] 2025-06-03 12:23:58,903 [wrapper] pandaids: 6666452511
[2025-06-03 08:23:59] 2025-06-03 12:23:58,949 [wrapper] cleanup supervisor_pilot   7331 200452
[2025-06-03 08:23:59] 2025-06-03 12:23:58,952 [wrapper] Test setup, not cleaning
[2025-06-03 08:23:59] 2025-06-03 12:23:58,954 [wrapper] apfmon messages muted
[2025-06-03 08:23:59] 2025-06-03 12:23:58,957 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:23:59] 2025-06-03 12:23:58,959 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:23:59]  *** Error codes and diagnostics ***
[2025-06-03 08:23:59]     "exeErrorCode": 0,
[2025-06-03 08:23:59]     "exeErrorDiag": "",
[2025-06-03 08:23:59]     "pilotErrorCode": 0,
[2025-06-03 08:23:59]     "pilotErrorDiag": "",
[2025-06-03 08:23:59]  *** Listing of results directory ***
[2025-06-03 08:23:59] total 416344
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas    495897 May 26 18:07 pilot3.tar.gz
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas      5111 May 26 19:08 queuedata.json
[2025-06-03 08:23:59] -rwx------ 1 boincer umatlas     37140 May 26 19:12 runpilot2-wrapper.sh
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas       100 Jun  3 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:23:59] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 06:55 run_atlas
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas       105 Jun  3 06:55 job.xml
[2025-06-03 08:23:59] -rw-r--r-- 2 boincer umatlas 224892552 Jun  3 06:55 EVNT.44871834._002311.pool.root.1
[2025-06-03 08:23:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:55 start_atlas.sh
[2025-06-03 08:23:59] drwxrwx--x 2 boincer umatlas      4096 Jun  3 06:55 shared
[2025-06-03 08:23:59] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 06:55 input.tar.gz
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas         0 Jun  3 06:55 boinc_lockfile
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas      2559 Jun  3 06:55 pandaJob.out
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas    984355 Jun  3 06:55 agis_schedconf.cvmfs.json
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas   1603667 Jun  3 06:55 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:23:59] drwx------ 4 boincer umatlas      4096 Jun  3 06:55 pilot3
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas      6354 Jun  3 08:20 init_data.xml
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas 195932404 Jun  3 08:23 HITS.44871837._058385.pool.root.1
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas       529 Jun  3 08:23 boinc_task_state.xml
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas      1045 Jun  3 08:23 memory_monitor_summary.json
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas    316602 Jun  3 08:23 log.44871837._058385.job.log.tgz.1
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas        95 Jun  3 08:23 pilot_heartbeat.json
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas      7734 Jun  3 08:23 heartbeat.json
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 08:23 boinc_mmap_file
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas        27 Jun  3 08:23 wrapper_checkpoint.txt
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas      4734 Jun  3 08:23 pilotlog.txt
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas    519625 Jun  3 08:23 log.44871837._058385.job.log.1
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas       357 Jun  3 08:23 output.list
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas       620 Jun  3 08:23 runtime_log
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas    860160 Jun  3 08:23 result.tar.gz
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas      8669 Jun  3 08:23 runtime_log.err
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas       658 Jun  3 08:23 komLDmTAwd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6uXKDmK6aINm.diag
[2025-06-03 08:23:59] -rw-r--r-- 1 boincer umatlas     21474 Jun  3 08:23 stderr.txt
[2025-06-03 08:23:59] HITS file was successfully produced:
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas 195932404 Jun  3 08:23 shared/HITS.pool.root.1
[2025-06-03 08:23:59]  *** Contents of shared directory: ***
[2025-06-03 08:23:59] total 412328
[2025-06-03 08:23:59] -rw-r--r-- 2 boincer umatlas 224892552 Jun  3 06:55 ATLAS.root_0
[2025-06-03 08:23:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:55 start_atlas.sh
[2025-06-03 08:23:59] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 06:55 input.tar.gz
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas 195932404 Jun  3 08:23 HITS.pool.root.1
[2025-06-03 08:23:59] -rw------- 1 boincer umatlas    860160 Jun  3 08:23 result.tar.gz
08:24:01 (196877): run_atlas exited; CPU time 44531.233009
08:24:01 (196877): called boinc_finish(0)

</stderr_txt>
]]>

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