Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:38:59 (3960): wrapper (7.7.26015): starting
06:38:59 (3960): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:38:59] Arguments: --nthreads 8
[2025-06-03 06:38:59] Threads: 8
[2025-06-03 06:38:59] Checking for CVMFS
[2025-06-03 06:38:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:39:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:39:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:39:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:39:00] 2.11.2.0 2840 34132 99212 146739 0 57 13655666 20275201 1 130560 0 11145972 99.956 7016884 8118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 06:39:00] CVMFS is ok
[2025-06-03 06:39:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:39:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:39:00] Further information can be found at the LHC@home message board.
[2025-06-03 06:39:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:39:00] Checking for apptainer binary...
[2025-06-03 06:39:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:39:00] Running /usr/bin/apptainer --version
[2025-06-03 06:39:00] apptainer version 1.3.2-1.el7
[2025-06-03 06:39:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:39:01] c-204-8.aglt2.org
[2025-06-03 06:39:01] apptainer works
[2025-06-03 06:39:01] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:39:01] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:39:01] Starting ATLAS job with PandaID=6677520098
[2025-06-03 06:39:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:32:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:32:28] 2025-06-03 12:32:15,244 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 08:32:28] 2025-06-03 12:32:15,245 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677520098/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,246 | INFO     | extracted standard info from prmon json
[2025-06-03 08:32:28] 2025-06-03 12:32:15,247 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:32:28] 2025-06-03 12:32:15,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:32:28] 2025-06-03 12:32:15,247 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:32:28] 2025-06-03 12:32:15,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:32:28] 2025-06-03 12:32:15,251 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:32:28] 2025-06-03 12:32:15,251 | INFO     | sum of square deviations: 424045160.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,252 | INFO     | sum of deviations: -4903165970.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,252 | INFO     | mean x: 1748950544.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,252 | INFO     | mean y: 2483319.7657657657
[2025-06-03 08:32:28] 2025-06-03 12:32:15,253 | INFO     | -- intersect: 20225317110.75583
[2025-06-03 08:32:28] 2025-06-03 12:32:15,253 | INFO     | intersect: 20225317110.75583
[2025-06-03 08:32:28] 2025-06-03 12:32:15,253 | INFO     | chi2: 2.4500981053156434
[2025-06-03 08:32:28] 2025-06-03 12:32:15,253 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 08:32:28] 2025-06-03 12:32:15,254 | INFO     | sum of deviations: 2959876617.499998
[2025-06-03 08:32:28] 2025-06-03 12:32:15,254 | INFO     | mean x: 1748950391.5
[2025-06-03 08:32:28] 2025-06-03 12:32:15,254 | INFO     | mean y: 2504443.4056603773
[2025-06-03 08:32:28] 2025-06-03 12:32:15,254 | INFO     | -- intersect: -14015743361.703304
[2025-06-03 08:32:28] 2025-06-03 12:32:15,255 | INFO     | intersect: -14015743361.703304
[2025-06-03 08:32:28] 2025-06-03 12:32:15,255 | INFO     | chi2: 1.6136884273345204
[2025-06-03 08:32:28] 2025-06-03 12:32:15,255 | INFO     | current chi2=1.6136884273345204 (change=34.13780355025291 %)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,255 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,256 | INFO     | sum of deviations: 3053936879.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,256 | INFO     | mean x: 1748950239.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,256 | INFO     | mean y: 2504731.504950495
[2025-06-03 08:32:28] 2025-06-03 12:32:15,256 | INFO     | -- intersect: -16717544047.718212
[2025-06-03 08:32:28] 2025-06-03 12:32:15,256 | INFO     | intersect: -16717544047.718212
[2025-06-03 08:32:28] 2025-06-03 12:32:15,257 | INFO     | chi2: 1.6164966185475254
[2025-06-03 08:32:28] 2025-06-03 12:32:15,257 | INFO     | current chi2=1.6164966185475254 (change=-0.17402313640207842 %)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,257 | INFO     | right removable region: 100
[2025-06-03 08:32:28] 2025-06-03 12:32:15,257 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 08:32:28] 2025-06-03 12:32:15,258 | INFO     | sum of deviations: -21073333432.5
[2025-06-03 08:32:28] 2025-06-03 12:32:15,258 | INFO     | mean x: 1748950696.5
[2025-06-03 08:32:28] 2025-06-03 12:32:15,258 | INFO     | mean y: 2527374.669811321
[2025-06-03 08:32:28] 2025-06-03 12:32:15,258 | INFO     | -- intersect: 99807789494.96664
[2025-06-03 08:32:28] 2025-06-03 12:32:15,258 | INFO     | intersect: 99807789494.96664
[2025-06-03 08:32:28] 2025-06-03 12:32:15,259 | INFO     | chi2: 0.9910693543839543
[2025-06-03 08:32:28] 2025-06-03 12:32:15,259 | INFO     | current chi2=0.9910693543839543 (change=59.549809363397884 %)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,259 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,260 | INFO     | sum of deviations: -18975949052.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,260 | INFO     | mean x: 1748950849.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,260 | INFO     | mean y: 2520828.801980198
[2025-06-03 08:32:28] 2025-06-03 12:32:15,260 | INFO     | -- intersect: 103894289720.2694
[2025-06-03 08:32:28] 2025-06-03 12:32:15,260 | INFO     | intersect: 103894289720.2694
[2025-06-03 08:32:28] 2025-06-03 12:32:15,260 | INFO     | chi2: 0.982292856123822
[2025-06-03 08:32:28] 2025-06-03 12:32:15,261 | INFO     | current chi2=0.982292856123822 (change=0.8855584345646239 %)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,261 | INFO     | left removable region: 20
[2025-06-03 08:32:28] 2025-06-03 12:32:15,261 | INFO     | sum of square deviations: 158737860.0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,261 | INFO     | sum of deviations: -4609961539.999999
[2025-06-03 08:32:28] 2025-06-03 12:32:15,262 | INFO     | mean x: 1748950818.5
[2025-06-03 08:32:28] 2025-06-03 12:32:15,262 | INFO     | mean y: 2522917.975
[2025-06-03 08:32:28] 2025-06-03 12:32:15,262 | INFO     | -- intersect: 50794413451.44016
[2025-06-03 08:32:28] 2025-06-03 12:32:15,262 | INFO     | intersect: 50794413451.44016
[2025-06-03 08:32:28] 2025-06-03 12:32:15,262 | INFO     | chi2: 0.06569362230688304
[2025-06-03 08:32:28] 2025-06-03 12:32:15,262 | INFO     | -- intersect: 50794413451.44016
[2025-06-03 08:32:28] 2025-06-03 12:32:15,262 | INFO     | current memory leak: -29.04 B/s (using 80 data points, chi2=0.07)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,263 | INFO     | ..............................
[2025-06-03 08:32:28] 2025-06-03 12:32:15,263 | INFO     | . Timing measurements:
[2025-06-03 08:32:28] 2025-06-03 12:32:15,263 | INFO     | . get job = 0 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,263 | INFO     | . initial setup = 3 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,263 | INFO     | . payload setup = 10 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,263 | INFO     | . stage-in = 0 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,264 | INFO     | . payload execution = 6739 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,264 | INFO     | . stage-out = 0 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,264 | INFO     | . log creation = 0 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,264 | INFO     | ..............................
[2025-06-03 08:32:28] 2025-06-03 12:32:15,357 | INFO     | 
[2025-06-03 08:32:28] 2025-06-03 12:32:15,358 | INFO     | job summary report
[2025-06-03 08:32:28] 2025-06-03 12:32:15,358 | INFO     | --------------------------------------------------
[2025-06-03 08:32:28] 2025-06-03 12:32:15,358 | INFO     | PanDA job id: 6677520098
[2025-06-03 08:32:28] 2025-06-03 12:32:15,358 | INFO     | task id: 45006595
[2025-06-03 08:32:28] 2025-06-03 12:32:15,358 | INFO     | errors: (none)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | pilot state: finished 
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | transexitcode: 0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | exeerrorcode: 0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | exeerrordiag: 
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | exitcode: 0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | exitmsg: OK
[2025-06-03 08:32:28] 2025-06-03 12:32:15,359 | INFO     | cpuconsumptiontime: 49905 s
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | nevents: 400
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | neventsw: 0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | pid: 14824
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | pgrp: 14824
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | corecount: 8
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | event service: False
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | sizes: {0: 2405182, 6: 2405388, 11: 2405416, 6754: 2432367, 6755: 2441308, 6756: 2441364, 6762: 2441662}
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | --------------------------------------------------
[2025-06-03 08:32:28] 2025-06-03 12:32:15,360 | INFO     | 
[2025-06-03 08:32:28] 2025-06-03 12:32:15,361 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 08:32:28] 2025-06-03 12:32:15,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,390 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:32:28] 2025-06-03 12:32:15,391 | INFO     | job 6677520098 has completed (purged errors)
[2025-06-03 08:32:28] 2025-06-03 12:32:15,391 | INFO     | overall cleanup function is called
[2025-06-03 08:32:28] 2025-06-03 12:32:16,396 | INFO     | --- collectZombieJob: --- 10, [14824]
[2025-06-03 08:32:28] 2025-06-03 12:32:16,396 | INFO     | zombie collector waiting for pid 14824
[2025-06-03 08:32:28] 2025-06-03 12:32:16,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:32:28] 2025-06-03 12:32:16,397 | INFO     | collected zombie processes
[2025-06-03 08:32:28] 2025-06-03 12:32:16,397 | INFO     | will attempt to kill all subprocesses of pid=14824
[2025-06-03 08:32:28] 2025-06-03 12:32:16,490 | INFO     | process IDs to be killed: [14824] (in reverse order)
[2025-06-03 08:32:28] 2025-06-03 12:32:16,545 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:32:28] 2025-06-03 12:32:16,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:32:28] 2025-06-03 12:32:16,552 | INFO     | did not find any defunct processes belonging to 14824
[2025-06-03 08:32:28] 2025-06-03 12:32:16,556 | INFO     | did not find any defunct processes belonging to 14824
[2025-06-03 08:32:28] 2025-06-03 12:32:16,556 | INFO     | ready for new job
[2025-06-03 08:32:28] 2025-06-03 12:32:16,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:32:28] 2025-06-03 12:32:16,558 | INFO     | **************************************
[2025-06-03 08:32:28] 2025-06-03 12:32:16,559 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:32:28] 2025-06-03 12:32:16,559 | INFO     | **************************************
[2025-06-03 08:32:28] 2025-06-03 12:32:16,559 | INFO     | 
[2025-06-03 08:32:28] 2025-06-03 12:32:16,559 | INFO     | architecture information:
[2025-06-03 08:32:28] 2025-06-03 12:32:16,560 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:32:28] 2025-06-03 12:32:16,578 | INFO     | cat /etc/os-release:
[2025-06-03 08:32:28] NAME="CentOS Linux"
[2025-06-03 08:32:28] VERSION="7 (Core)"
[2025-06-03 08:32:28] ID="centos"
[2025-06-03 08:32:28] ID_LIKE="rhel fedora"
[2025-06-03 08:32:28] VERSION_ID="7"
[2025-06-03 08:32:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:32:28] ANSI_COLOR="0;31"
[2025-06-03 08:32:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:32:28] HOME_URL="https://www.centos.org/"
[2025-06-03 08:32:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:32:28] 
[2025-06-03 08:32:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:32:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:32:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:32:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:32:28] 
[2025-06-03 08:32:28] 2025-06-03 12:32:16,578 | INFO     | **************************************
[2025-06-03 08:32:28] 2025-06-03 12:32:17,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 08:32:28] 2025-06-03 12:32:17,099 | INFO     | sufficient remaining disk space (18644729856 B)
[2025-06-03 08:32:28] 2025-06-03 12:32:17,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:32:28] 2025-06-03 12:32:17,099 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:32:28] 2025-06-03 12:32:17,100 | INFO     | update_server=False
[2025-06-03 08:32:28] 2025-06-03 12:32:17,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:32:28] 2025-06-03 12:32:17,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:32:28] 2025-06-03 12:32:17,382 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:32:28] 2025-06-03 12:32:17,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:32:28] 2025-06-03 12:32:17,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:32:28] 2025-06-03 12:32:17,578 | INFO     | all data control threads have been joined
[2025-06-03 08:32:28] 2025-06-03 12:32:17,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:32:28] 2025-06-03 12:32:17,719 | INFO     | aborting loop
[2025-06-03 08:32:28] 2025-06-03 12:32:18,103 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,104 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,209 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,266 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:32:28] 2025-06-03 12:32:18,330 | INFO     | all job control threads have been joined
[2025-06-03 08:32:28] 2025-06-03 12:32:18,499 | INFO     | all payload control threads have been joined
[2025-06-03 08:32:28] 2025-06-03 12:32:18,584 | INFO     | [data] control thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,720 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,813 | INFO     | [job] validate thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:18,880 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:19,008 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:19,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:32:28] 2025-06-03 12:32:19,335 | INFO     | [job] control thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:19,367 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:19,369 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:19,505 | INFO     | [payload] control thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:20,303 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:23,036 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:32:28] 2025-06-03 12:32:23,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520228321088)>', '<ExcThread(monitor, started 140519652980480)>']
[2025-06-03 08:32:28] 2025-06-03 12:32:23,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:32:28] 2025-06-03 12:32:23,417 | INFO     | [monitor] control thread has ended
[2025-06-03 08:32:28] 2025-06-03 12:32:28,418 | INFO     | all workflow threads have been joined
[2025-06-03 08:32:28] 2025-06-03 12:32:28,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:32:28] 2025-06-03 12:32:28,419 | INFO     | traces error code: 0
[2025-06-03 08:32:28] 2025-06-03 12:32:28,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:32:28] 2025-06-03 12:32:28,532 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:32:28] 2025-06-03 12:32:28,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:32:28] 2025-06-03 12:32:28,541 [wrapper] pilotpid: 7596
[2025-06-03 08:32:28] 2025-06-03 12:32:28,545 [wrapper] Pilot exit status: 0
[2025-06-03 08:32:28] 2025-06-03 12:32:28,562 [wrapper] pandaids: 6677520098
[2025-06-03 08:32:28] 2025-06-03 12:32:28,602 [wrapper] cleanup supervisor_pilot 17153 7597
[2025-06-03 08:32:28] 2025-06-03 12:32:28,607 [wrapper] Test setup, not cleaning
[2025-06-03 08:32:28] 2025-06-03 12:32:28,611 [wrapper] apfmon messages muted
[2025-06-03 08:32:28] 2025-06-03 12:32:28,615 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:32:28] 2025-06-03 12:32:28,620 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:32:28]  *** Error codes and diagnostics ***
[2025-06-03 08:32:28]     "exeErrorCode": 0,
[2025-06-03 08:32:28]     "exeErrorDiag": "",
[2025-06-03 08:32:28]     "pilotErrorCode": 0,
[2025-06-03 08:32:28]     "pilotErrorDiag": "",
[2025-06-03 08:32:28]  *** Listing of results directory ***
[2025-06-03 08:32:28] total 391240
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 03:38 pilot3.tar.gz
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 03:56 queuedata.json
[2025-06-03 08:32:28] -rwx------ 1 boincer umatlas     37140 Jun  3 03:57 runpilot2-wrapper.sh
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas       100 Jun  3 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:32:28] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 06:38 run_atlas
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas       105 Jun  3 06:38 job.xml
[2025-06-03 08:32:28] -rw-r--r-- 2 boincer umatlas 214251140 Jun  3 06:38 EVNT.45006593._000997.pool.root.1
[2025-06-03 08:32:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:38 start_atlas.sh
[2025-06-03 08:32:28] drwxrwx--x 2 boincer umatlas      4096 Jun  3 06:38 shared
[2025-06-03 08:32:28] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 06:38 input.tar.gz
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas         0 Jun  3 06:38 boinc_lockfile
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 06:39 pandaJob.out
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas    984355 Jun  3 06:39 agis_schedconf.cvmfs.json
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas   1603667 Jun  3 06:39 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:32:28] drwx------ 4 boincer umatlas      4096 Jun  3 06:39 pilot3
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas      5823 Jun  3 08:27 init_data.xml
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas       529 Jun  3 08:31 boinc_task_state.xml
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas 180614184 Jun  3 08:31 HITS.45006595._024938.pool.root.1
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas        95 Jun  3 08:31 pilot_heartbeat.json
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas      1051 Jun  3 08:32 memory_monitor_summary.json
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas    343520 Jun  3 08:32 log.45006595._024938.job.log.tgz.1
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas      7750 Jun  3 08:32 heartbeat.json
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas        27 Jun  3 08:32 wrapper_checkpoint.txt
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 08:32 boinc_mmap_file
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas      4353 Jun  3 08:32 pilotlog.txt
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas    622908 Jun  3 08:32 log.45006595._024938.job.log.1
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas       357 Jun  3 08:32 output.list
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas       620 Jun  3 08:32 runtime_log
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas    983040 Jun  3 08:32 result.tar.gz
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 08:32 runtime_log.err
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas       658 Jun  3 08:32 kneMDmhhbg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOuXKDmPIUEAo.diag
[2025-06-03 08:32:28] -rw-r--r-- 1 boincer umatlas     20742 Jun  3 08:32 stderr.txt
[2025-06-03 08:32:28] HITS file was successfully produced:
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas 180614184 Jun  3 08:31 shared/HITS.pool.root.1
[2025-06-03 08:32:28]  *** Contents of shared directory: ***
[2025-06-03 08:32:28] total 387096
[2025-06-03 08:32:28] -rw-r--r-- 2 boincer umatlas 214251140 Jun  3 06:38 ATLAS.root_0
[2025-06-03 08:32:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:38 start_atlas.sh
[2025-06-03 08:32:28] -rw-r--r-- 2 boincer umatlas    508885 Jun  3 06:38 input.tar.gz
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas 180614184 Jun  3 08:31 HITS.pool.root.1
[2025-06-03 08:32:28] -rw------- 1 boincer umatlas    983040 Jun  3 08:32 result.tar.gz
08:32:30 (3960): run_atlas exited; CPU time 49848.811549
08:32:30 (3960): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN