Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:38:08 (1078994): wrapper (7.7.26015): starting
06:38:08 (1078994): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:38:08] Arguments: --nthreads 8
[2025-06-03 06:38:08] Threads: 8
[2025-06-03 06:38:08] Checking for CVMFS
[2025-06-03 06:38:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:38:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:38:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:38:08] 2.12.6.0 9933 29947 446132 146739 0 187 31742154 32935937 8443 16776704 2 147238902 99.620 142737315 27445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 06:38:08] CVMFS is ok
[2025-06-03 06:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:38:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:38:08] Further information can be found at the LHC@home message board.
[2025-06-03 06:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:38:08] Checking for apptainer binary...
[2025-06-03 06:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:38:08] Running /usr/bin/apptainer --version
[2025-06-03 06:38:08] apptainer version 1.4.1-1.el9
[2025-06-03 06:38:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:38:08] c6-8-25-3.aglt2.org
[2025-06-03 06:38:08] apptainer works
[2025-06-03 06:38:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:38:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:38:08] Starting ATLAS job with PandaID=6677495806
[2025-06-03 06:38:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:58:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:58:09]  filetype=log
[2025-06-03 07:58:09]  guid=a9b6301f-bf8d-47c0-9258-422f1fdfc6e7
[2025-06-03 07:58:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 07:58:09]  is_altstaged=None
[2025-06-03 07:58:09]  is_tar=False
[2025-06-03 07:58:09]  lfn=log.45006595._022951.job.log.tgz.1
[2025-06-03 07:58:09]  mtime=0
[2025-06-03 07:58:09]  protocol_id=None
[2025-06-03 07:58:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 07:58:09]  replicas=None
[2025-06-03 07:58:09]  scope=mc23_13p6TeV
[2025-06-03 07:58:09]  status=None
[2025-06-03 07:58:09]  status_code=0
[2025-06-03 07:58:09]  storage_token=
[2025-06-03 07:58:09]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6677495806/log.45006595._022951.job.log.tgz.1
[2025-06-03 07:58:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/c3/log.45006595._022951.job.log.tgz.1
[2025-06-03 07:58:09]  workdir=None
[2025-06-03 07:58:09] ]
[2025-06-03 07:58:09] 2025-06-03 11:57:44,500 | INFO     | transferring file log.45006595._022951.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6677495806/log.45006595._022951.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-03 07:58:09] 2025-06-03 11:57:44,500 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6677495806/log.45006595._022951.job.log.tgz.1 /tmp/boinchome/slots/10/log.45006595._022951.j
[2025-06-03 07:58:09] 2025-06-03 11:57:44,516 | INFO     | adding to output.list: log.45006595._022951.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/c3/log.45006595._022951.job.log.tg
[2025-06-03 07:58:09] 2025-06-03 11:57:44,517 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 07:58:09] 2025-06-03 11:57:44,517 | INFO     | summary of transferred files:
[2025-06-03 07:58:09] 2025-06-03 11:57:44,517 | INFO     |  -- lfn=log.45006595._022951.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 07:58:09] 2025-06-03 11:57:44,517 | INFO     | stage-out finished correctly
[2025-06-03 07:58:09] 2025-06-03 11:57:44,604 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 07:58:09] 2025-06-03 11:57:45,884 | INFO     | monitor loop #349: job 0:6677495806 is in state 'finished'
[2025-06-03 07:58:09] 2025-06-03 11:57:45,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 07:58:09] 2025-06-03 11:57:46,112 | INFO     | job 6677495806 has state=finished
[2025-06-03 07:58:09] 2025-06-03 11:57:46,112 | INFO     | preparing for final server update for job 6677495806 in state='finished'
[2025-06-03 07:58:09] 2025-06-03 11:57:46,113 | INFO     | this job has now completed (state=finished)
[2025-06-03 07:58:09] 2025-06-03 11:57:46,113 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 07:58:09] 2025-06-03 11:57:46,113 | INFO     | log transfer has been attempted: DONE
[2025-06-03 07:58:09] 2025-06-03 11:57:46,113 | INFO     | job 6677495806 has finished - writing final server update
[2025-06-03 07:58:09] 2025-06-03 11:57:46,113 | INFO     | total number of processed events: 400 (read)
[2025-06-03 07:58:09] 2025-06-03 11:57:46,130 | INFO     | executing command: lscpu
[2025-06-03 07:58:09] 2025-06-03 11:57:46,215 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 07:58:09] 2025-06-03 11:57:48,386 | INFO     | monitor loop #350: job 0:6677495806 is in state 'finished'
[2025-06-03 07:58:09] 2025-06-03 11:57:48,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 07:58:09] 2025-06-03 11:57:49,691 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 07:58:09] 2025-06-03 11:57:49,691 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6677495806/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:58:09] 2025-06-03 11:57:49,692 | INFO     | extracted standard info from prmon json
[2025-06-03 07:58:09] 2025-06-03 11:57:49,692 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:58:09] 2025-06-03 11:57:49,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:58:09] 2025-06-03 11:57:49,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:58:09] 2025-06-03 11:57:49,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:58:09] 2025-06-03 11:57:49,694 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:58:09] 2025-06-03 11:57:49,695 | INFO     | sum of square deviations: 110960220.0
[2025-06-03 07:58:09] 2025-06-03 11:57:49,695 | INFO     | sum of deviations: 10198024713.0
[2025-06-03 07:58:09] 2025-06-03 11:57:49,695 | INFO     | mean x: 1748949555.0
[2025-06-03 07:58:09] 2025-06-03 11:57:49,695 | INFO     | mean y: 2087934.042253521
[2025-06-03 07:58:09] 2025-06-03 11:57:49,695 | INFO     | -- intersect: -160738678294.4345
[2025-06-03 07:58:09] 2025-06-03 11:57:49,695 | INFO     | intersect: -160738678294.4345
[2025-06-03 07:58:09] 2025-06-03 11:57:49,695 | INFO     | chi2: 0.9062970815651297
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | -- intersect: -160738678294.4345
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | current memory leak: 91.91 B/s (using 71 data points, chi2=0.91)
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | ..............................
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | . Timing measurements:
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | . get job = 0 s
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | . initial setup = 2 s
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | . payload setup = 3 s
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | . stage-in = 0 s
[2025-06-03 07:58:09] 2025-06-03 11:57:49,696 | INFO     | . payload execution = 4747 s
[2025-06-03 07:58:09] 2025-06-03 11:57:49,697 | INFO     | . stage-out = 0 s
[2025-06-03 07:58:09] 2025-06-03 11:57:49,697 | INFO     | . log creation = 0 s
[2025-06-03 07:58:09] 2025-06-03 11:57:49,697 | INFO     | ..............................
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | 
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | job summary report
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | --------------------------------------------------
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | PanDA job id: 6677495806
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | task id: 45006595
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | errors: (none)
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:58:09] 2025-06-03 11:57:50,082 | INFO     | pilot state: finished 
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | transexitcode: 0
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | exeerrorcode: 0
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | exeerrordiag: 
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | exitcode: 0
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | exitmsg: OK
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | cpuconsumptiontime: 32471 s
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | nevents: 400
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | neventsw: 0
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | pid: 1097984
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | pgrp: 1097984
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | corecount: 8
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | event service: False
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | sizes: {0: 2405183, 2: 2405389, 11: 2405417, 4754: 2431561, 4756: 2440560, 4761: 2440674}
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | --------------------------------------------------
[2025-06-03 07:58:09] 2025-06-03 11:57:50,083 | INFO     | 
[2025-06-03 07:58:09] 2025-06-03 11:57:50,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-06-03 07:58:09] 2025-06-03 11:57:50,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | job 6677495806 has completed (purged errors)
[2025-06-03 07:58:09] 2025-06-03 11:57:50,102 | INFO     | overall cleanup function is called
[2025-06-03 07:58:09] 2025-06-03 11:57:51,110 | INFO     | --- collectZombieJob: --- 10, [1097984]
[2025-06-03 07:58:09] 2025-06-03 11:57:51,110 | INFO     | zombie collector waiting for pid 1097984
[2025-06-03 07:58:09] 2025-06-03 11:57:51,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:58:09] 2025-06-03 11:57:51,111 | INFO     | collected zombie processes
[2025-06-03 07:58:09] 2025-06-03 11:57:51,111 | INFO     | will attempt to kill all subprocesses of pid=1097984
[2025-06-03 07:58:09] 2025-06-03 11:57:51,446 | INFO     | process IDs to be killed: [1097984] (in reverse order)
[2025-06-03 07:58:09] 2025-06-03 11:57:51,537 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:58:09] 2025-06-03 11:57:51,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:58:09] 2025-06-03 11:57:51,551 | INFO     | did not find any defunct processes belonging to 1097984
[2025-06-03 07:58:09] 2025-06-03 11:57:51,563 | INFO     | did not find any defunct processes belonging to 1097984
[2025-06-03 07:58:09] 2025-06-03 11:57:51,563 | INFO     | ready for new job
[2025-06-03 07:58:09] 2025-06-03 11:57:51,564 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:58:09] 2025-06-03 11:57:51,571 | INFO     | **************************************
[2025-06-03 07:58:09] 2025-06-03 11:57:51,572 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:58:09] 2025-06-03 11:57:51,572 | INFO     | **************************************
[2025-06-03 07:58:09] 2025-06-03 11:57:51,572 | INFO     | 
[2025-06-03 07:58:09] 2025-06-03 11:57:51,589 | INFO     | architecture information:
[2025-06-03 07:58:09] 2025-06-03 11:57:51,590 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:58:09] 2025-06-03 11:57:51,604 | INFO     | cat /etc/os-release:
[2025-06-03 07:58:09] NAME="CentOS Linux"
[2025-06-03 07:58:09] VERSION="7 (Core)"
[2025-06-03 07:58:09] ID="centos"
[2025-06-03 07:58:09] ID_LIKE="rhel fedora"
[2025-06-03 07:58:09] VERSION_ID="7"
[2025-06-03 07:58:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:58:09] ANSI_COLOR="0;31"
[2025-06-03 07:58:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:58:09] HOME_URL="https://www.centos.org/"
[2025-06-03 07:58:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:58:09] 
[2025-06-03 07:58:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:58:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:58:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:58:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:58:09] 
[2025-06-03 07:58:09] 2025-06-03 11:57:51,604 | INFO     | **************************************
[2025-06-03 07:58:09] 2025-06-03 11:57:52,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-06-03 07:58:09] 2025-06-03 11:57:52,123 | INFO     | sufficient remaining disk space (70450675712 B)
[2025-06-03 07:58:09] 2025-06-03 11:57:52,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:58:09] 2025-06-03 11:57:52,123 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:58:09] 2025-06-03 11:57:52,124 | INFO     | update_server=False
[2025-06-03 07:58:09] 2025-06-03 11:57:52,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:58:09] 2025-06-03 11:57:52,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:58:09] 2025-06-03 11:57:52,124 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:58:09] 2025-06-03 11:57:52,124 | INFO     | aborting loop
[2025-06-03 07:58:09] 2025-06-03 11:57:52,125 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:58:09] 2025-06-03 11:57:52,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:58:09] 2025-06-03 11:57:52,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:58:09] 2025-06-03 11:57:52,572 | INFO     | all job control threads have been joined
[2025-06-03 07:58:09] 2025-06-03 11:57:52,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:58:09] 2025-06-03 11:57:52,619 | INFO     | all payload control threads have been joined
[2025-06-03 07:58:09] 2025-06-03 11:57:53,032 | INFO     | all data control threads have been joined
[2025-06-03 07:58:09] 2025-06-03 11:57:53,129 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:53,130 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:53,151 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:53,394 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:53,577 | INFO     | [job] control thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:53,624 | INFO     | [payload] control thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:53,902 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:53,961 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:54,037 | INFO     | [data] control thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:54,074 | INFO     | [job] validate thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:54,201 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:54,209 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:54,621 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:54,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:58:09] 2025-06-03 11:57:55,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:58:09] 2025-06-03 11:57:55,798 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:57:59,206 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:58:03,021 | INFO     | job.realtimelogging is not enabled
[2025-06-03 07:58:09] 2025-06-03 11:58:04,026 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:58:09] 2025-06-03 11:58:04,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295194203968)>', '<ExcThread(monitor, started 140294553065216)>']
[2025-06-03 07:58:09] 2025-06-03 11:58:05,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:58:09] 2025-06-03 11:58:05,187 | INFO     | [monitor] control thread has ended
[2025-06-03 07:58:09] 2025-06-03 11:58:09,322 | INFO     | all workflow threads have been joined
[2025-06-03 07:58:09] 2025-06-03 11:58:09,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:58:09] 2025-06-03 11:58:09,323 | INFO     | traces error code: 0
[2025-06-03 07:58:09] 2025-06-03 11:58:09,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:58:09] 2025-06-03 11:58:09,436 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:58:09] 2025-06-03 11:58:09,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:58:09] 2025-06-03 11:58:09,440 [wrapper] pilotpid: 1086387
[2025-06-03 07:58:09] 2025-06-03 11:58:09,442 [wrapper] Pilot exit status: 0
[2025-06-03 07:58:09] 2025-06-03 11:58:09,448 [wrapper] pandaids: 6677495806
[2025-06-03 07:58:09] 2025-06-03 11:58:09,505 [wrapper] cleanup supervisor_pilot 1355456 1086389
[2025-06-03 07:58:09] 2025-06-03 11:58:09,508 [wrapper] Test setup, not cleaning
[2025-06-03 07:58:09] 2025-06-03 11:58:09,510 [wrapper] apfmon messages muted
[2025-06-03 07:58:09] 2025-06-03 11:58:09,511 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:58:09] 2025-06-03 11:58:09,513 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:58:09]  *** Error codes and diagnostics ***
[2025-06-03 07:58:09]     "exeErrorCode": 0,
[2025-06-03 07:58:09]     "exeErrorDiag": "",
[2025-06-03 07:58:09]     "pilotErrorCode": 0,
[2025-06-03 07:58:09]     "pilotErrorDiag": "",
[2025-06-03 07:58:09]  *** Listing of results directory ***
[2025-06-03 07:58:09] total 398724
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 02:46 pilot3.tar.gz
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 02:53 queuedata.json
[2025-06-03 07:58:09] -rwx------. 1 boincer umatlas     37140 Jun  3 02:54 runpilot2-wrapper.sh
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas       100 Jun  3 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:58:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 06:38 run_atlas
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas       105 Jun  3 06:38 job.xml
[2025-06-03 07:58:09] -rw-r--r--. 2 boincer umatlas 216080076 Jun  3 06:38 EVNT.45006593._000918.pool.root.1
[2025-06-03 07:58:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:38 start_atlas.sh
[2025-06-03 07:58:09] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 06:38 shared
[2025-06-03 07:58:09] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 06:38 input.tar.gz
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas         0 Jun  3 06:38 boinc_lockfile
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 06:38 pandaJob.out
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas    984355 Jun  3 06:38 agis_schedconf.cvmfs.json
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas   1603667 Jun  3 06:38 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:58:09] drwx------. 4 boincer umatlas      4096 Jun  3 06:38 pilot3
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas      6859 Jun  3 07:55 init_data.xml
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas 186825960 Jun  3 07:57 HITS.45006595._022951.pool.root.1
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas       529 Jun  3 07:57 boinc_task_state.xml
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas      1035 Jun  3 07:57 memory_monitor_summary.json
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas    312617 Jun  3 07:57 log.45006595._022951.job.log.tgz.1
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas        95 Jun  3 07:57 pilot_heartbeat.json
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas      7730 Jun  3 07:57 heartbeat.json
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas        27 Jun  3 07:58 wrapper_checkpoint.txt
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 07:58 boinc_mmap_file
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas      4549 Jun  3 07:58 pilotlog.txt
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas    466827 Jun  3 07:58 log.45006595._022951.job.log.1
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas       357 Jun  3 07:58 output.list
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas       620 Jun  3 07:58 runtime_log
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas    798720 Jun  3 07:58 result.tar.gz
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas      8678 Jun  3 07:58 runtime_log.err
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas       653 Jun  3 07:58 nGjLDmWiag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbZiKDm5bwNEm.diag
[2025-06-03 07:58:09] -rw-r--r--. 1 boincer umatlas     21194 Jun  3 07:58 stderr.txt
[2025-06-03 07:58:09] HITS file was successfully produced:
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas 186825960 Jun  3 07:57 shared/HITS.pool.root.1
[2025-06-03 07:58:09]  *** Contents of shared directory: ***
[2025-06-03 07:58:09] total 394764
[2025-06-03 07:58:09] -rw-r--r--. 2 boincer umatlas 216080076 Jun  3 06:38 ATLAS.root_0
[2025-06-03 07:58:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:38 start_atlas.sh
[2025-06-03 07:58:09] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 06:38 input.tar.gz
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas 186825960 Jun  3 07:57 HITS.pool.root.1
[2025-06-03 07:58:09] -rw-------. 1 boincer umatlas    798720 Jun  3 07:58 result.tar.gz
07:58:11 (1078994): run_atlas exited; CPU time 32639.235545
07:58:11 (1078994): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN