Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:28:48 (4314): wrapper (7.7.26015): starting
19:28:48 (4314): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 19:28:48] Arguments: --nthreads 8
[2025-06-03 19:28:48] Threads: 8
[2025-06-03 19:28:48] Checking for CVMFS
[2025-06-03 19:28:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:28:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:28:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:28:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:28:49] 2.11.2.0 3966 32056 94632 146749 3 263 15262950 25165825 3367 130560 0 17650116 99.792 19355265 2123 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 19:28:49] CVMFS is ok
[2025-06-03 19:28:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:28:49] Checking for apptainer binary...
[2025-06-03 19:28:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:28:49] Running /usr/bin/apptainer --version
[2025-06-03 19:28:49] apptainer version 1.3.2-1.el7
[2025-06-03 19:28:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:28:51] cg-vwn439.simple-grid.lan
[2025-06-03 19:28:51] apptainer works
[2025-06-03 19:28:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 19:28:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 19:28:51] Starting ATLAS job with PandaID=6677517780
[2025-06-03 19:28:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:09:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:09:17] 2025-06-03 21:07:31,978 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:09:17] 2025-06-03 21:07:31,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:09:17] 2025-06-03 21:07:31,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:09:17] 2025-06-03 21:07:31,983 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:09:17] 2025-06-03 21:07:31,984 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 01:09:17] 2025-06-03 21:07:31,986 | INFO     | sum of deviations: 18797801114.0
[2025-06-04 01:09:17] 2025-06-03 21:07:31,986 | INFO     | mean x: 1748978300.5
[2025-06-04 01:09:17] 2025-06-03 21:07:31,986 | INFO     | mean y: 2456337.5
[2025-06-04 01:09:17] 2025-06-03 21:07:31,986 | INFO     | -- intersect: -11125492696.808382
[2025-06-04 01:09:17] 2025-06-03 21:07:31,986 | INFO     | intersect: -11125492696.808382
[2025-06-04 01:09:17] 2025-06-03 21:07:31,987 | INFO     | chi2: 2.3883953124182407
[2025-06-04 01:09:17] 2025-06-03 21:07:31,992 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 01:09:17] 2025-06-03 21:07:31,993 | INFO     | sum of deviations: 32054961186.999992
[2025-06-04 01:09:17] 2025-06-03 21:07:31,994 | INFO     | mean x: 1748978148.0
[2025-06-04 01:09:17] 2025-06-03 21:07:31,994 | INFO     | mean y: 2466040.9516908214
[2025-06-04 01:09:17] 2025-06-03 21:07:31,994 | INFO     | -- intersect: -20382045722.445232
[2025-06-04 01:09:17] 2025-06-03 21:07:31,994 | INFO     | intersect: -20382045722.445232
[2025-06-04 01:09:17] 2025-06-03 21:07:31,994 | INFO     | chi2: 1.6151454366609448
[2025-06-04 01:09:17] 2025-06-03 21:07:31,994 | INFO     | current chi2=1.6151454366609448 (change=32.375288618967495 %)
[2025-06-04 01:09:17] 2025-06-03 21:07:31,995 | INFO     | sum of square deviations: 2555770710.5
[2025-06-04 01:09:17] 2025-06-03 21:07:31,996 | INFO     | sum of deviations: 31186739525.0
[2025-06-04 01:09:17] 2025-06-03 21:07:31,996 | INFO     | mean x: 1748977995.5
[2025-06-04 01:09:17] 2025-06-03 21:07:31,996 | INFO     | mean y: 2465360.405940594
[2025-06-04 01:09:17] 2025-06-03 21:07:31,997 | INFO     | -- intersect: -21339402654.79805
[2025-06-04 01:09:17] 2025-06-03 21:07:31,997 | INFO     | intersect: -21339402654.79805
[2025-06-04 01:09:17] 2025-06-03 21:07:31,997 | INFO     | chi2: 1.6161679400432938
[2025-06-04 01:09:17] 2025-06-03 21:07:31,997 | INFO     | current chi2=1.6161679400432938 (change=-0.06330720188659024 %)
[2025-06-04 01:09:17] 2025-06-03 21:07:31,997 | INFO     | right removable region: 201
[2025-06-04 01:09:17] 2025-06-03 21:07:31,998 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 01:09:17] 2025-06-03 21:07:31,999 | INFO     | sum of deviations: -16046211344.999996
[2025-06-04 01:09:17] 2025-06-03 21:07:31,999 | INFO     | mean x: 1748978453.0
[2025-06-04 01:09:17] 2025-06-03 21:07:31,999 | INFO     | mean y: 2482117.507246377
[2025-06-04 01:09:17] 2025-06-03 21:07:32,000 | INFO     | -- intersect: 10206651108.793081
[2025-06-04 01:09:17] 2025-06-03 21:07:32,000 | INFO     | intersect: 10206651108.793081
[2025-06-04 01:09:17] 2025-06-03 21:07:32,000 | INFO     | chi2: 0.8467826864491885
[2025-06-04 01:09:17] 2025-06-03 21:07:32,000 | INFO     | current chi2=0.8467826864491885 (change=64.54595761235922 %)
[2025-06-04 01:09:17] 2025-06-03 21:07:32,001 | INFO     | sum of square deviations: 2555770710.5
[2025-06-04 01:09:17] 2025-06-03 21:07:32,002 | INFO     | sum of deviations: -12819376157.5
[2025-06-04 01:09:17] 2025-06-03 21:07:32,002 | INFO     | mean x: 1748978605.5
[2025-06-04 01:09:17] 2025-06-03 21:07:32,002 | INFO     | mean y: 2479545.797029703
[2025-06-04 01:09:17] 2025-06-03 21:07:32,003 | INFO     | -- intersect: 8775103217.870487
[2025-06-04 01:09:17] 2025-06-03 21:07:32,003 | INFO     | intersect: 8775103217.870487
[2025-06-04 01:09:17] 2025-06-03 21:07:32,003 | INFO     | chi2: 0.8256818795439108
[2025-06-04 01:09:17] 2025-06-03 21:07:32,003 | INFO     | current chi2=0.8256818795439108 (change=2.4918798226448944 %)
[2025-06-04 01:09:17] 2025-06-03 21:07:32,003 | INFO     | left removable region: 20
[2025-06-04 01:09:17] 2025-06-03 21:07:32,004 | INFO     | sum of square deviations: 1838657730.0
[2025-06-04 01:09:17] 2025-06-03 21:07:32,005 | INFO     | sum of deviations: 2744988593.0
[2025-06-04 01:09:17] 2025-06-03 21:07:32,005 | INFO     | mean x: 1748978575.0
[2025-06-04 01:09:17] 2025-06-03 21:07:32,005 | INFO     | mean y: 2488198.690607735
[2025-06-04 01:09:17] 2025-06-03 21:07:32,005 | INFO     | -- intersect: -2608615629.6311517
[2025-06-04 01:09:17] 2025-06-03 21:07:32,005 | INFO     | intersect: -2608615629.6311517
[2025-06-04 01:09:17] 2025-06-03 21:07:32,006 | INFO     | chi2: 0.0008625600491867382
[2025-06-04 01:09:17] 2025-06-03 21:07:32,006 | INFO     | -- intersect: -2608615629.6311517
[2025-06-04 01:09:17] 2025-06-03 21:07:32,006 | INFO     | current memory leak: 1.49 B/s (using 181 data points, chi2=0.00)
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | ..............................
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | . Timing measurements:
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | . get job = 0 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | . initial setup = 2 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | . payload setup = 19 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | . stage-in = 0 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | . payload execution = 12934 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,007 | INFO     | . stage-out = 6 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,008 | INFO     | . log creation = 1 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,008 | INFO     | ..............................
[2025-06-04 01:09:17] 2025-06-03 21:07:32,571 | INFO     | 
[2025-06-04 01:09:17] 2025-06-03 21:07:32,571 | INFO     | job summary report
[2025-06-04 01:09:17] 2025-06-03 21:07:32,571 | INFO     | --------------------------------------------------
[2025-06-04 01:09:17] 2025-06-03 21:07:32,571 | INFO     | PanDA job id: 6677517780
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | task id: 45006595
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | errors: (none)
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | pilot state: finished 
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | transexitcode: 0
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | exeerrorcode: 0
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | exeerrordiag: 
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | exitcode: 0
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | exitmsg: OK
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | cpuconsumptiontime: 49369 s
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | nevents: 400
[2025-06-04 01:09:17] 2025-06-03 21:07:32,572 | INFO     | neventsw: 0
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | pid: 18900
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | pgrp: 18900
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | corecount: 8
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | event service: False
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | sizes: {0: 2405009, 1: 2405208, 12: 2405208, 14: 2405442, 23: 2405470, 12957: 2434644, 12958: 2434771, 12966: 2443852, 13051: 2443966}
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | --------------------------------------------------
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | 
[2025-06-04 01:09:17] 2025-06-03 21:07:32,573 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 01:09:17] 2025-06-03 21:07:32,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,856 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:09:17] 2025-06-03 21:07:32,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,858 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:09:17] 2025-06-03 21:07:32,858 | INFO     | job 6677517780 has completed (purged errors)
[2025-06-04 01:09:17] 2025-06-03 21:07:32,858 | INFO     | overall cleanup function is called
[2025-06-04 01:09:17] 2025-06-03 21:07:33,202 | INFO     | PID=8796 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 01:09:17] 2025-06-03 21:07:33,202 | INFO     | .. there are 9 such processes running
[2025-06-04 01:09:17] 2025-06-03 21:07:33,867 | INFO     | --- collectZombieJob: --- 10, [18900]
[2025-06-04 01:09:17] 2025-06-03 21:07:33,867 | INFO     | zombie collector waiting for pid 18900
[2025-06-04 01:09:17] 2025-06-03 21:07:33,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:09:17] 2025-06-03 21:07:33,868 | INFO     | collected zombie processes
[2025-06-04 01:09:17] 2025-06-03 21:07:33,868 | INFO     | will attempt to kill all subprocesses of pid=18900
[2025-06-04 01:09:17] 2025-06-03 21:07:34,011 | INFO     | process IDs to be killed: [18900] (in reverse order)
[2025-06-04 01:09:17] 2025-06-03 21:07:34,981 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:09:17] 2025-06-03 21:07:34,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:09:17] 2025-06-03 21:07:34,984 | INFO     | did not find any defunct processes belonging to 18900
[2025-06-04 01:09:17] 2025-06-03 21:07:34,988 | INFO     | did not find any defunct processes belonging to 18900
[2025-06-04 01:09:17] 2025-06-03 21:07:34,988 | INFO     | ready for new job
[2025-06-04 01:09:17] 2025-06-03 21:07:34,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:09:17] 2025-06-03 21:07:34,997 | INFO     | **************************************
[2025-06-04 01:09:17] 2025-06-03 21:07:34,997 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:09:17] 2025-06-03 21:07:34,997 | INFO     | **************************************
[2025-06-04 01:09:17] 2025-06-03 21:07:34,998 | INFO     | 
[2025-06-04 01:09:17] 2025-06-03 21:07:34,998 | INFO     | pilot is running in a VM
[2025-06-04 01:09:17] 2025-06-03 21:07:34,998 | INFO     | architecture information:
[2025-06-04 01:09:17] 2025-06-03 21:07:35,010 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:09:17] 2025-06-03 21:07:35,222 | INFO     | cat /etc/os-release:
[2025-06-04 01:09:17] NAME="CentOS Linux"
[2025-06-04 01:09:17] VERSION="7 (Core)"
[2025-06-04 01:09:17] ID="centos"
[2025-06-04 01:09:17] ID_LIKE="rhel fedora"
[2025-06-04 01:09:17] VERSION_ID="7"
[2025-06-04 01:09:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:09:17] ANSI_COLOR="0;31"
[2025-06-04 01:09:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:09:17] HOME_URL="https://www.centos.org/"
[2025-06-04 01:09:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:09:17] 
[2025-06-04 01:09:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:09:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:09:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:09:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:09:17] 
[2025-06-04 01:09:17] 2025-06-03 21:07:35,223 | INFO     | **************************************
[2025-06-04 01:09:17] 2025-06-03 21:07:35,726 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 01:09:17] 2025-06-03 21:07:35,970 | INFO     | sufficient remaining disk space (496773365760 B)
[2025-06-04 01:09:17] 2025-06-03 21:07:35,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:09:17] 2025-06-03 21:07:35,970 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:09:17] 2025-06-03 21:07:35,970 | INFO     | update_server=False
[2025-06-04 01:09:17] 2025-06-03 21:07:35,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:09:17] 2025-06-03 21:07:35,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:09:17] 2025-06-03 21:07:35,971 | INFO     | aborting loop
[2025-06-04 01:09:17] 2025-06-03 21:07:35,978 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:09:17] 2025-06-03 21:07:35,979 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:09:17] 2025-06-03 21:07:35,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:09:17] 2025-06-03 21:07:35,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:09:17] 2025-06-03 21:07:36,321 | INFO     | all job control threads have been joined
[2025-06-04 01:09:17] 2025-06-03 21:07:36,595 | INFO     | all payload control threads have been joined
[2025-06-04 01:09:17] 2025-06-03 21:07:36,881 | INFO     | all data control threads have been joined
[2025-06-04 01:09:17] 2025-06-03 21:07:36,976 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:36,977 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,198 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:09:17] 2025-06-03 21:07:37,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:09:17] 2025-06-03 21:07:37,327 | INFO     | [job] control thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,346 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,389 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,602 | INFO     | [payload] control thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,887 | INFO     | [data] control thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,900 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,943 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:37,944 | INFO     | [job] validate thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:38,079 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:38,227 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:38,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:38,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:09:17] 2025-06-03 21:07:39,277 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:42,953 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:09:17] 2025-06-03 21:07:44,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613396780864)>', '<ExcThread(monitor, started 140612967839488)>']
[2025-06-04 01:09:17] 2025-06-03 21:07:45,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:09:17] 2025-06-03 21:07:45,030 | INFO     | [monitor] control thread has ended
[2025-06-04 01:09:17] 2025-06-03 21:07:49,935 | INFO     | all workflow threads have been joined
[2025-06-04 01:09:17] 2025-06-03 21:07:49,935 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:09:17] 2025-06-03 21:07:49,936 | INFO     | traces error code: 0
[2025-06-04 01:09:17] 2025-06-03 21:07:49,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:09:17] 2025-06-03 21:07:50,348 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:09:17] 2025-06-03 21:07:50,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:09:17] 2025-06-03 21:07:50,492 [wrapper] pilotpid: 8796
[2025-06-04 01:09:17] 2025-06-03 21:07:50,578 [wrapper] Pilot exit status: 0
[2025-06-04 01:09:17] 2025-06-03 21:07:50,994 [wrapper] pandaids: 6677517780
[2025-06-04 01:09:17] 2025-06-03 21:07:51,852 [wrapper] cleanup supervisor_pilot  6338 8797
[2025-06-04 01:09:17] 2025-06-03 21:07:51,967 [wrapper] Test setup, not cleaning
[2025-06-04 01:09:17] 2025-06-03 21:07:52,059 [wrapper] apfmon messages muted
[2025-06-04 01:09:17] 2025-06-03 21:07:52,159 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:09:17] 2025-06-03 21:07:52,265 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:09:17]  *** Error codes and diagnostics ***
[2025-06-04 01:09:17]     "exeErrorCode": 0,
[2025-06-04 01:09:17]     "exeErrorDiag": "",
[2025-06-04 01:09:17]     "pilotErrorCode": 0,
[2025-06-04 01:09:17]     "pilotErrorDiag": "",
[2025-06-04 01:09:17]  *** Listing of results directory ***
[2025-06-04 01:09:17] total 389356
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc    495897 Jun  3 09:38 pilot3.tar.gz
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc      5111 Jun  3 09:52 queuedata.json
[2025-06-04 01:09:17] -rwx------. 1 boinc boinc     37140 Jun  3 09:52 runpilot2-wrapper.sh
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc       100 Jun  3 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:09:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 19:28 run_atlas
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc       105 Jun  3 19:28 job.xml
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc      6392 Jun  3 19:28 init_data.xml
[2025-06-04 01:09:17] -rw-r--r--. 2 boinc boinc 216286866 Jun  3 19:28 EVNT.45006593._000985.pool.root.1
[2025-06-04 01:09:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 19:28 start_atlas.sh
[2025-06-04 01:09:17] drwxrwx--x. 2 boinc boinc        68 Jun  3 19:28 shared
[2025-06-04 01:09:17] -rw-r--r--. 2 boinc boinc    508877 Jun  3 19:28 input.tar.gz
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc         0 Jun  3 19:28 boinc_lockfile
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc      2523 Jun  3 19:28 pandaJob.out
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc    983734 Jun  3 19:29 agis_schedconf.cvmfs.json
[2025-06-04 01:09:17] drwx------. 4 boinc boinc      4096 Jun  3 19:29 pilot3
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc 175582880 Jun  3 23:04 HITS.45006595._024614.pool.root.1
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc       530 Jun  3 23:04 boinc_task_state.xml
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc      1024 Jun  3 23:05 memory_monitor_summary.json
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc   1603667 Jun  3 23:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc    364404 Jun  3 23:06 log.45006595._024614.job.log.tgz.1
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc        95 Jun  3 23:06 pilot_heartbeat.json
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc      7679 Jun  3 23:07 heartbeat.json
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc      4539 Jun  3 23:07 pilotlog.txt
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc   1141513 Jun  3 23:07 log.45006595._024614.job.log.1
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc       357 Jun  3 23:07 output.list
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc       620 Jun  3 23:07 runtime_log
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc   1525760 Jun  3 23:07 result.tar.gz
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc      8659 Jun  3 23:07 runtime_log.err
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc       656 Jun  3 23:07 H8eMDmlcbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtniKDmYDBQDo.diag
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc      8192 Jun  4 01:09 boinc_mmap_file
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc        28 Jun  4 01:09 wrapper_checkpoint.txt
[2025-06-04 01:09:17] -rw-r--r--. 1 boinc boinc     20587 Jun  4 01:09 stderr.txt
[2025-06-04 01:09:17] HITS file was successfully produced:
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc 175582880 Jun  3 23:04 shared/HITS.pool.root.1
[2025-06-04 01:09:17]  *** Contents of shared directory: ***
[2025-06-04 01:09:17] total 384696
[2025-06-04 01:09:17] -rw-r--r--. 2 boinc boinc 216286866 Jun  3 19:28 ATLAS.root_0
[2025-06-04 01:09:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 19:28 start_atlas.sh
[2025-06-04 01:09:17] -rw-r--r--. 2 boinc boinc    508877 Jun  3 19:28 input.tar.gz
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc 175582880 Jun  3 23:04 HITS.pool.root.1
[2025-06-04 01:09:17] -rw-------. 1 boinc boinc   1525760 Jun  3 23:07 result.tar.gz
01:09:19 (4314): run_atlas exited; CPU time 49536.059417
01:09:19 (4314): called boinc_finish(0)

</stderr_txt>
]]>

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