Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:55 (12404): wrapper (7.7.26015): starting
06:40:55 (12404): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:40:55] Arguments: --nthreads 8
[2025-06-03 06:40:55] Threads: 8
[2025-06-03 06:40:55] Checking for CVMFS
[2025-06-03 06:40:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:40:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:40:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:40:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:40:55] 2.11.2.0 2810 34135 73884 146739 0 58 14275820 20275201 1 130560 0 11456831 99.980 6207469 7587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 06:40:55] CVMFS is ok
[2025-06-03 06:40:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:40:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:40:55] Further information can be found at the LHC@home message board.
[2025-06-03 06:40:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:40:55] Checking for apptainer binary...
[2025-06-03 06:40:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:40:55] Running /usr/bin/apptainer --version
[2025-06-03 06:40:55] apptainer version 1.3.2-1.el7
[2025-06-03 06:40:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:40:57] c-204-37.aglt2.org
[2025-06-03 06:40:57] apptainer works
[2025-06-03 06:40:57] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:40:57] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:40:57] Starting ATLAS job with PandaID=6677518468
[2025-06-03 06:40:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:37:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:37:07] 2025-06-03 12:36:53,226 | INFO     | extracted standard info from prmon json
[2025-06-03 08:37:07] 2025-06-03 12:36:53,227 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:37:07] 2025-06-03 12:36:53,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:37:07] 2025-06-03 12:36:53,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:37:07] 2025-06-03 12:36:53,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:37:07] 2025-06-03 12:36:53,231 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:37:07] 2025-06-03 12:36:53,232 | INFO     | sum of square deviations: 459366752.5
[2025-06-03 08:37:07] 2025-06-03 12:36:53,232 | INFO     | sum of deviations: -629226132.5
[2025-06-03 08:37:07] 2025-06-03 12:36:53,233 | INFO     | mean x: 1748950753.5
[2025-06-03 08:37:07] 2025-06-03 12:36:53,233 | INFO     | mean y: 2474761.0263157897
[2025-06-03 08:37:07] 2025-06-03 12:36:53,233 | INFO     | -- intersect: 2398132506.3215976
[2025-06-03 08:37:07] 2025-06-03 12:36:53,233 | INFO     | intersect: 2398132506.3215976
[2025-06-03 08:37:07] 2025-06-03 12:36:53,234 | INFO     | chi2: 2.342277508017514
[2025-06-03 08:37:07] 2025-06-03 12:36:53,234 | INFO     | sum of square deviations: 401533110.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,235 | INFO     | sum of deviations: 6800761839.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,235 | INFO     | mean x: 1748950601.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,235 | INFO     | mean y: 2493654.4770642202
[2025-06-03 08:37:07] 2025-06-03 12:36:53,235 | INFO     | -- intersect: -29619463313.347866
[2025-06-03 08:37:07] 2025-06-03 12:36:53,235 | INFO     | intersect: -29619463313.347866
[2025-06-03 08:37:07] 2025-06-03 12:36:53,236 | INFO     | chi2: 1.5870722967972424
[2025-06-03 08:37:07] 2025-06-03 12:36:53,236 | INFO     | current chi2=1.5870722967972424 (change=32.24234569282406 %)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,236 | INFO     | sum of square deviations: 348769330.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,237 | INFO     | sum of deviations: 6618491856.5
[2025-06-03 08:37:07] 2025-06-03 12:36:53,237 | INFO     | mean x: 1748950448.5
[2025-06-03 08:37:07] 2025-06-03 12:36:53,237 | INFO     | mean y: 2493127.3365384615
[2025-06-03 08:37:07] 2025-06-03 12:36:53,237 | INFO     | -- intersect: -33186819421.50275
[2025-06-03 08:37:07] 2025-06-03 12:36:53,238 | INFO     | intersect: -33186819421.50275
[2025-06-03 08:37:07] 2025-06-03 12:36:53,238 | INFO     | chi2: 1.5903353246271859
[2025-06-03 08:37:07] 2025-06-03 12:36:53,238 | INFO     | current chi2=1.5903353246271859 (change=-0.20560045289230747 %)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,238 | INFO     | right removable region: 103
[2025-06-03 08:37:07] 2025-06-03 12:36:53,238 | INFO     | sum of square deviations: 401533110.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,239 | INFO     | sum of deviations: -17165007342.999996
[2025-06-03 08:37:07] 2025-06-03 12:36:53,239 | INFO     | mean x: 1748950906.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,239 | INFO     | mean y: 2517447.623853211
[2025-06-03 08:37:07] 2025-06-03 12:36:53,239 | INFO     | -- intersect: 74767846623.18423
[2025-06-03 08:37:07] 2025-06-03 12:36:53,239 | INFO     | intersect: 74767846623.18423
[2025-06-03 08:37:07] 2025-06-03 12:36:53,240 | INFO     | chi2: 0.9031278148615258
[2025-06-03 08:37:07] 2025-06-03 12:36:53,240 | INFO     | current chi2=0.9031278148615258 (change=61.442322194097045 %)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,240 | INFO     | sum of square deviations: 348769330.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,240 | INFO     | sum of deviations: -15902914811.5
[2025-06-03 08:37:07] 2025-06-03 12:36:53,241 | INFO     | mean x: 1748951058.5
[2025-06-03 08:37:07] 2025-06-03 12:36:53,241 | INFO     | mean y: 2513631.394230769
[2025-06-03 08:37:07] 2025-06-03 12:36:53,241 | INFO     | -- intersect: 79749834569.29967
[2025-06-03 08:37:07] 2025-06-03 12:36:53,241 | INFO     | intersect: 79749834569.29967
[2025-06-03 08:37:07] 2025-06-03 12:36:53,241 | INFO     | chi2: 0.8879221712119932
[2025-06-03 08:37:07] 2025-06-03 12:36:53,241 | INFO     | current chi2=0.8879221712119932 (change=1.6836646374205657 %)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,241 | INFO     | left removable region: 20
[2025-06-03 08:37:07] 2025-06-03 12:36:53,242 | INFO     | sum of square deviations: 177275882.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,242 | INFO     | sum of deviations: -1414448114.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,242 | INFO     | mean x: 1748951028.0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,242 | INFO     | mean y: 2510762.698795181
[2025-06-03 08:37:07] 2025-06-03 12:36:53,242 | INFO     | -- intersect: 13957034384.998196
[2025-06-03 08:37:07] 2025-06-03 12:36:53,243 | INFO     | intersect: 13957034384.998196
[2025-06-03 08:37:07] 2025-06-03 12:36:53,243 | INFO     | chi2: 0.03559759721480944
[2025-06-03 08:37:07] 2025-06-03 12:36:53,243 | INFO     | -- intersect: 13957034384.998196
[2025-06-03 08:37:07] 2025-06-03 12:36:53,243 | INFO     | current memory leak: -7.98 B/s (using 83 data points, chi2=0.04)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,244 | INFO     | ..............................
[2025-06-03 08:37:07] 2025-06-03 12:36:53,244 | INFO     | . Timing measurements:
[2025-06-03 08:37:07] 2025-06-03 12:36:53,244 | INFO     | . get job = 0 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,244 | INFO     | . initial setup = 3 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,244 | INFO     | . payload setup = 11 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,244 | INFO     | . stage-in = 0 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,244 | INFO     | . payload execution = 6901 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,245 | INFO     | . stage-out = 0 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,245 | INFO     | . log creation = 0 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,245 | INFO     | ..............................
[2025-06-03 08:37:07] 2025-06-03 12:36:53,344 | INFO     | 
[2025-06-03 08:37:07] 2025-06-03 12:36:53,344 | INFO     | job summary report
[2025-06-03 08:37:07] 2025-06-03 12:36:53,344 | INFO     | --------------------------------------------------
[2025-06-03 08:37:07] 2025-06-03 12:36:53,345 | INFO     | PanDA job id: 6677518468
[2025-06-03 08:37:07] 2025-06-03 12:36:53,345 | INFO     | task id: 45006595
[2025-06-03 08:37:07] 2025-06-03 12:36:53,345 | INFO     | errors: (none)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,345 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:37:07] 2025-06-03 12:36:53,345 | INFO     | pilot state: finished 
[2025-06-03 08:37:07] 2025-06-03 12:36:53,345 | INFO     | transexitcode: 0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,346 | INFO     | exeerrorcode: 0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,346 | INFO     | exeerrordiag: 
[2025-06-03 08:37:07] 2025-06-03 12:36:53,346 | INFO     | exitcode: 0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,346 | INFO     | exitmsg: OK
[2025-06-03 08:37:07] 2025-06-03 12:36:53,346 | INFO     | cpuconsumptiontime: 51372 s
[2025-06-03 08:37:07] 2025-06-03 12:36:53,346 | INFO     | nevents: 400
[2025-06-03 08:37:07] 2025-06-03 12:36:53,347 | INFO     | neventsw: 0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,347 | INFO     | pid: 22531
[2025-06-03 08:37:07] 2025-06-03 12:36:53,347 | INFO     | pgrp: 22531
[2025-06-03 08:37:07] 2025-06-03 12:36:53,347 | INFO     | corecount: 8
[2025-06-03 08:37:07] 2025-06-03 12:36:53,347 | INFO     | event service: False
[2025-06-03 08:37:07] 2025-06-03 12:36:53,347 | INFO     | sizes: {0: 2405182, 6: 2405388, 11: 2405416, 6916: 2432424, 6917: 2441365, 6918: 2441421, 6923: 2441719}
[2025-06-03 08:37:07] 2025-06-03 12:36:53,348 | INFO     | --------------------------------------------------
[2025-06-03 08:37:07] 2025-06-03 12:36:53,348 | INFO     | 
[2025-06-03 08:37:07] 2025-06-03 12:36:53,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 08:37:07] 2025-06-03 12:36:53,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:37:07] 2025-06-03 12:36:53,380 | INFO     | job 6677518468 has completed (purged errors)
[2025-06-03 08:37:07] 2025-06-03 12:36:53,380 | INFO     | overall cleanup function is called
[2025-06-03 08:37:07] 2025-06-03 12:36:53,884 | INFO     | 6944s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 08:37:07] 2025-06-03 12:36:54,388 | INFO     | --- collectZombieJob: --- 10, [22531]
[2025-06-03 08:37:07] 2025-06-03 12:36:54,388 | INFO     | zombie collector waiting for pid 22531
[2025-06-03 08:37:07] 2025-06-03 12:36:54,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:37:07] 2025-06-03 12:36:54,389 | INFO     | collected zombie processes
[2025-06-03 08:37:07] 2025-06-03 12:36:54,389 | INFO     | will attempt to kill all subprocesses of pid=22531
[2025-06-03 08:37:07] 2025-06-03 12:36:54,484 | INFO     | process IDs to be killed: [22531] (in reverse order)
[2025-06-03 08:37:07] 2025-06-03 12:36:54,542 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:37:07] 2025-06-03 12:36:54,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:37:07] 2025-06-03 12:36:54,547 | INFO     | did not find any defunct processes belonging to 22531
[2025-06-03 08:37:07] 2025-06-03 12:36:54,550 | INFO     | did not find any defunct processes belonging to 22531
[2025-06-03 08:37:07] 2025-06-03 12:36:54,550 | INFO     | ready for new job
[2025-06-03 08:37:07] 2025-06-03 12:36:54,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:37:07] 2025-06-03 12:36:54,552 | INFO     | **************************************
[2025-06-03 08:37:07] 2025-06-03 12:36:54,552 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:37:07] 2025-06-03 12:36:54,552 | INFO     | **************************************
[2025-06-03 08:37:07] 2025-06-03 12:36:54,552 | INFO     | 
[2025-06-03 08:37:07] 2025-06-03 12:36:54,553 | INFO     | architecture information:
[2025-06-03 08:37:07] 2025-06-03 12:36:54,553 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:37:07] 2025-06-03 12:36:54,571 | INFO     | cat /etc/os-release:
[2025-06-03 08:37:07] NAME="CentOS Linux"
[2025-06-03 08:37:07] VERSION="7 (Core)"
[2025-06-03 08:37:07] ID="centos"
[2025-06-03 08:37:07] ID_LIKE="rhel fedora"
[2025-06-03 08:37:07] VERSION_ID="7"
[2025-06-03 08:37:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:37:07] ANSI_COLOR="0;31"
[2025-06-03 08:37:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:37:07] HOME_URL="https://www.centos.org/"
[2025-06-03 08:37:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:37:07] 
[2025-06-03 08:37:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:37:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:37:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:37:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:37:07] 
[2025-06-03 08:37:07] 2025-06-03 12:36:54,572 | INFO     | **************************************
[2025-06-03 08:37:07] 2025-06-03 12:36:55,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 08:37:07] 2025-06-03 12:36:55,096 | INFO     | sufficient remaining disk space (18600689664 B)
[2025-06-03 08:37:07] 2025-06-03 12:36:55,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:37:07] 2025-06-03 12:36:55,097 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:37:07] 2025-06-03 12:36:55,097 | INFO     | update_server=False
[2025-06-03 08:37:07] 2025-06-03 12:36:55,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:37:07] 2025-06-03 12:36:55,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:37:07] 2025-06-03 12:36:55,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:37:07] 2025-06-03 12:36:55,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:37:07] 2025-06-03 12:36:55,098 | INFO     | aborting loop
[2025-06-03 08:37:07] 2025-06-03 12:36:55,099 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:37:07] 2025-06-03 12:36:55,099 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:37:07] 2025-06-03 12:36:55,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:37:07] 2025-06-03 12:36:55,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:37:07] 2025-06-03 12:36:55,418 | INFO     | all payload control threads have been joined
[2025-06-03 08:37:07] 2025-06-03 12:36:55,986 | INFO     | all data control threads have been joined
[2025-06-03 08:37:07] 2025-06-03 12:36:56,098 | INFO     | all job control threads have been joined
[2025-06-03 08:37:07] 2025-06-03 12:36:56,100 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,103 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,104 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,382 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,419 | INFO     | [payload] control thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,568 | INFO     | [job] validate thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,801 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,817 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:56,991 | INFO     | [data] control thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:57,088 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:57,102 | INFO     | [job] control thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:57,104 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:57,243 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:57,306 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:36:58,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:37:07] 2025-06-03 12:37:02,196 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:37:07] 2025-06-03 12:37:02,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209526839104)>', '<ExcThread(monitor, started 140208200742656)>']
[2025-06-03 08:37:07] 2025-06-03 12:37:03,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:37:07] 2025-06-03 12:37:03,139 | INFO     | [monitor] control thread has ended
[2025-06-03 08:37:07] 2025-06-03 12:37:07,433 | INFO     | all workflow threads have been joined
[2025-06-03 08:37:07] 2025-06-03 12:37:07,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:37:07] 2025-06-03 12:37:07,434 | INFO     | traces error code: 0
[2025-06-03 08:37:07] 2025-06-03 12:37:07,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:37:07] 2025-06-03 12:37:07,551 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:37:07] 2025-06-03 12:37:07,556 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:37:07] 2025-06-03 12:37:07,561 [wrapper] pilotpid: 16030
[2025-06-03 08:37:07] 2025-06-03 12:37:07,565 [wrapper] Pilot exit status: 0
[2025-06-03 08:37:07] 2025-06-03 12:37:07,584 [wrapper] pandaids: 6677518468
[2025-06-03 08:37:07] 2025-06-03 12:37:07,628 [wrapper] cleanup supervisor_pilot 30034 16031
[2025-06-03 08:37:07] 2025-06-03 12:37:07,633 [wrapper] Test setup, not cleaning
[2025-06-03 08:37:07] 2025-06-03 12:37:07,638 [wrapper] apfmon messages muted
[2025-06-03 08:37:07] 2025-06-03 12:37:07,643 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:37:07] 2025-06-03 12:37:07,648 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:37:07]  *** Error codes and diagnostics ***
[2025-06-03 08:37:07]     "exeErrorCode": 0,
[2025-06-03 08:37:07]     "exeErrorDiag": "",
[2025-06-03 08:37:07]     "pilotErrorCode": 0,
[2025-06-03 08:37:07]     "pilotErrorDiag": "",
[2025-06-03 08:37:07]  *** Listing of results directory ***
[2025-06-03 08:37:07] total 396844
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 03:38 pilot3.tar.gz
[2025-06-03 08:37:07] -rwx------ 1 boincer umatlas     37140 Jun  3 03:56 runpilot2-wrapper.sh
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 03:56 queuedata.json
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas       100 Jun  3 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:37:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 06:40 run_atlas
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas       105 Jun  3 06:40 job.xml
[2025-06-03 08:37:07] -rw-r--r-- 2 boincer umatlas 215609358 Jun  3 06:40 EVNT.45006593._000993.pool.root.1
[2025-06-03 08:37:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:40 start_atlas.sh
[2025-06-03 08:37:07] drwxrwx--x 2 boincer umatlas      4096 Jun  3 06:40 shared
[2025-06-03 08:37:07] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 06:40 input.tar.gz
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas         0 Jun  3 06:40 boinc_lockfile
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 06:40 pandaJob.out
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas    984355 Jun  3 06:41 agis_schedconf.cvmfs.json
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas   1603667 Jun  3 06:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:37:07] drwx------ 4 boincer umatlas      4096 Jun  3 06:41 pilot3
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas      5905 Jun  3 08:31 init_data.xml
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas 185018634 Jun  3 08:36 HITS.45006595._024818.pool.root.1
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas       530 Jun  3 08:36 boinc_task_state.xml
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas      1050 Jun  3 08:36 memory_monitor_summary.json
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas    316340 Jun  3 08:36 log.45006595._024818.job.log.tgz.1
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas        95 Jun  3 08:36 pilot_heartbeat.json
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas      7748 Jun  3 08:36 heartbeat.json
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 08:37 boinc_mmap_file
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas        27 Jun  3 08:37 wrapper_checkpoint.txt
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas      4476 Jun  3 08:37 pilotlog.txt
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas    636136 Jun  3 08:37 log.45006595._024818.job.log.1
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas       357 Jun  3 08:37 output.list
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas       620 Jun  3 08:37 runtime_log
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas    972800 Jun  3 08:37 result.tar.gz
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 08:37 runtime_log.err
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas       659 Jun  3 08:37 C4LKDmhgbg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmptXKDmk6E3Go.diag
[2025-06-03 08:37:07] -rw-r--r-- 1 boincer umatlas     20776 Jun  3 08:37 stderr.txt
[2025-06-03 08:37:07] HITS file was successfully produced:
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas 185018634 Jun  3 08:36 shared/HITS.pool.root.1
[2025-06-03 08:37:07]  *** Contents of shared directory: ***
[2025-06-03 08:37:07] total 392712
[2025-06-03 08:37:07] -rw-r--r-- 2 boincer umatlas 215609358 Jun  3 06:40 ATLAS.root_0
[2025-06-03 08:37:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:40 start_atlas.sh
[2025-06-03 08:37:07] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 06:40 input.tar.gz
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas 185018634 Jun  3 08:36 HITS.pool.root.1
[2025-06-03 08:37:07] -rw------- 1 boincer umatlas    972800 Jun  3 08:37 result.tar.gz
08:37:09 (12404): run_atlas exited; CPU time 51326.653047
08:37:09 (12404): called boinc_finish(0)

</stderr_txt>
]]>

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