Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:27:22 (2899307): wrapper (7.7.26015): starting
06:27:22 (2899307): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:27:22] Arguments: --nthreads 8
[2025-06-03 06:27:22] Threads: 8
[2025-06-03 06:27:22] Checking for CVMFS
[2025-06-03 06:27:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:27:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:27:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:27:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:27:23] 2.12.6.0 201829 22934 405084 146739 0 197 22277618 32935937 9000 16776704 0 212085058 99.637 180730409 21803 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 06:27:23] CVMFS is ok
[2025-06-03 06:27:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:27:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:27:23] Further information can be found at the LHC@home message board.
[2025-06-03 06:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:27:23] Checking for apptainer binary...
[2025-06-03 06:27:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:27:23] Running /usr/bin/apptainer --version
[2025-06-03 06:27:23] apptainer version 1.4.1-1.el9
[2025-06-03 06:27:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:27:23] c7-16-8.aglt2.org
[2025-06-03 06:27:23] apptainer works
[2025-06-03 06:27:23] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:27:23] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:27:23] Starting ATLAS job with PandaID=6677495545
[2025-06-03 06:27:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:19:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:19:55]  domain=
[2025-06-03 07:19:55]  filesize=273008
[2025-06-03 07:19:55]  filetype=log
[2025-06-03 07:19:55]  guid=dfbdabef-db90-49aa-a8cd-88c6cca437c6
[2025-06-03 07:19:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 07:19:55]  is_altstaged=None
[2025-06-03 07:19:55]  is_tar=False
[2025-06-03 07:19:55]  lfn=log.45006595._022808.job.log.tgz.1
[2025-06-03 07:19:55]  mtime=0
[2025-06-03 07:19:55]  protocol_id=None
[2025-06-03 07:19:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 07:19:55]  replicas=None
[2025-06-03 07:19:55]  scope=mc23_13p6TeV
[2025-06-03 07:19:55]  status=None
[2025-06-03 07:19:55]  status_code=0
[2025-06-03 07:19:55]  storage_token=
[2025-06-03 07:19:55]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677495545/log.45006595._022808.job.log.tgz.1
[2025-06-03 07:19:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/2e/log.45006595._022808.job.log.tgz.1
[2025-06-03 07:19:55]  workdir=None
[2025-06-03 07:19:55] ]
[2025-06-03 07:19:55] 2025-06-03 11:19:39,214 | INFO     | transferring file log.45006595._022808.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677495545/log.45006595._022808.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 07:19:55] 2025-06-03 11:19:39,215 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677495545/log.45006595._022808.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._022808.job
[2025-06-03 07:19:55] 2025-06-03 11:19:39,233 | INFO     | adding to output.list: log.45006595._022808.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/2e/log.45006595._022808.job.log.tg
[2025-06-03 07:19:55] 2025-06-03 11:19:39,233 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 07:19:55] 2025-06-03 11:19:39,234 | INFO     | summary of transferred files:
[2025-06-03 07:19:55] 2025-06-03 11:19:39,234 | INFO     |  -- lfn=log.45006595._022808.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 07:19:55] 2025-06-03 11:19:39,234 | INFO     | stage-out finished correctly
[2025-06-03 07:19:55] 2025-06-03 11:19:39,307 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 07:19:55] 2025-06-03 11:19:39,381 | INFO     | job 6677495545 has state=finished
[2025-06-03 07:19:55] 2025-06-03 11:19:39,382 | INFO     | preparing for final server update for job 6677495545 in state='finished'
[2025-06-03 07:19:55] 2025-06-03 11:19:39,433 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 07:19:55] 2025-06-03 11:19:39,434 | INFO     | this job has now completed (state=finished)
[2025-06-03 07:19:55] 2025-06-03 11:19:39,434 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 07:19:55] 2025-06-03 11:19:39,434 | INFO     | log transfer has been attempted: DONE
[2025-06-03 07:19:55] 2025-06-03 11:19:39,434 | INFO     | job 6677495545 has finished - writing final server update
[2025-06-03 07:19:55] 2025-06-03 11:19:39,434 | INFO     | total number of processed events: 400 (read)
[2025-06-03 07:19:55] 2025-06-03 11:19:39,451 | INFO     | executing command: lscpu
[2025-06-03 07:19:55] 2025-06-03 11:19:39,526 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 07:19:55] 2025-06-03 11:19:40,447 | INFO     | monitor loop #230: job 0:6677495545 is in state 'finished'
[2025-06-03 07:19:55] 2025-06-03 11:19:40,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 07:19:55] 2025-06-03 11:19:42,609 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 07:19:55] 2025-06-03 11:19:42,609 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677495545/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:19:55] 2025-06-03 11:19:42,610 | INFO     | extracted standard info from prmon json
[2025-06-03 07:19:55] 2025-06-03 11:19:42,610 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:19:55] 2025-06-03 11:19:42,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:19:55] 2025-06-03 11:19:42,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:19:55] 2025-06-03 11:19:42,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:19:55] 2025-06-03 11:19:42,611 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | sum of square deviations: 26400495.0
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | sum of deviations: 4302781369.5
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | mean x: 1748948093.5
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | mean y: 2143253.7954545454
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | -- intersect: -285043317936.7748
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | intersect: -285043317936.7748
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | chi2: 0.757239661000399
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | -- intersect: -285043317936.7748
[2025-06-03 07:19:55] 2025-06-03 11:19:42,612 | INFO     | current memory leak: 162.98 B/s (using 44 data points, chi2=0.76)
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | ..............................
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . Timing measurements:
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . get job = 0 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . initial setup = 2 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . payload setup = 5 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . stage-in = 0 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . payload execution = 3101 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . stage-out = 0 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | . log creation = 0 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,613 | INFO     | ..............................
[2025-06-03 07:19:55] 2025-06-03 11:19:42,678 | INFO     | 
[2025-06-03 07:19:55] 2025-06-03 11:19:42,678 | INFO     | job summary report
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | --------------------------------------------------
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | PanDA job id: 6677495545
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | task id: 45006595
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | errors: (none)
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | pilot state: finished 
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | transexitcode: 0
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | exeerrorcode: 0
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | exeerrordiag: 
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | exitcode: 0
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | exitmsg: OK
[2025-06-03 07:19:55] 2025-06-03 11:19:42,679 | INFO     | cpuconsumptiontime: 20260 s
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | nevents: 400
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | neventsw: 0
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | pid: 2914055
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | pgrp: 2914055
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | corecount: 8
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | event service: False
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | sizes: {0: 2405176, 4: 2405382, 11: 2405410, 3110: 2430744, 3112: 2439741, 3116: 2439855}
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | --------------------------------------------------
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | 
[2025-06-03 07:19:55] 2025-06-03 11:19:42,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 07:19:55] 2025-06-03 11:19:42,700 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:19:55] 2025-06-03 11:19:42,702 | INFO     | job 6677495545 has completed (purged errors)
[2025-06-03 07:19:55] 2025-06-03 11:19:42,702 | INFO     | overall cleanup function is called
[2025-06-03 07:19:55] 2025-06-03 11:19:43,708 | INFO     | --- collectZombieJob: --- 10, [2914055]
[2025-06-03 07:19:55] 2025-06-03 11:19:43,709 | INFO     | zombie collector waiting for pid 2914055
[2025-06-03 07:19:55] 2025-06-03 11:19:43,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:19:55] 2025-06-03 11:19:43,709 | INFO     | collected zombie processes
[2025-06-03 07:19:55] 2025-06-03 11:19:43,709 | INFO     | will attempt to kill all subprocesses of pid=2914055
[2025-06-03 07:19:55] 2025-06-03 11:19:43,981 | INFO     | process IDs to be killed: [2914055] (in reverse order)
[2025-06-03 07:19:55] 2025-06-03 11:19:44,068 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:19:55] 2025-06-03 11:19:44,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:19:55] 2025-06-03 11:19:44,080 | INFO     | did not find any defunct processes belonging to 2914055
[2025-06-03 07:19:55] 2025-06-03 11:19:44,091 | INFO     | did not find any defunct processes belonging to 2914055
[2025-06-03 07:19:55] 2025-06-03 11:19:44,091 | INFO     | ready for new job
[2025-06-03 07:19:55] 2025-06-03 11:19:44,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:19:55] 2025-06-03 11:19:44,092 | INFO     | **************************************
[2025-06-03 07:19:55] 2025-06-03 11:19:44,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:19:55] 2025-06-03 11:19:44,092 | INFO     | **************************************
[2025-06-03 07:19:55] 2025-06-03 11:19:44,092 | INFO     | 
[2025-06-03 07:19:55] 2025-06-03 11:19:44,108 | INFO     | architecture information:
[2025-06-03 07:19:55] 2025-06-03 11:19:44,109 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:19:55] 2025-06-03 11:19:44,119 | INFO     | cat /etc/os-release:
[2025-06-03 07:19:55] NAME="CentOS Linux"
[2025-06-03 07:19:55] VERSION="7 (Core)"
[2025-06-03 07:19:55] ID="centos"
[2025-06-03 07:19:55] ID_LIKE="rhel fedora"
[2025-06-03 07:19:55] VERSION_ID="7"
[2025-06-03 07:19:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:19:55] ANSI_COLOR="0;31"
[2025-06-03 07:19:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:19:55] HOME_URL="https://www.centos.org/"
[2025-06-03 07:19:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:19:55] 
[2025-06-03 07:19:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:19:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:19:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:19:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:19:55] 
[2025-06-03 07:19:55] 2025-06-03 11:19:44,119 | INFO     | **************************************
[2025-06-03 07:19:55] 2025-06-03 11:19:44,622 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 07:19:55] 2025-06-03 11:19:44,635 | INFO     | sufficient remaining disk space (70891077632 B)
[2025-06-03 07:19:55] 2025-06-03 11:19:44,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:19:55] 2025-06-03 11:19:44,635 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:19:55] 2025-06-03 11:19:44,635 | INFO     | update_server=False
[2025-06-03 07:19:55] 2025-06-03 11:19:44,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:19:55] 2025-06-03 11:19:44,636 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:19:55] 2025-06-03 11:19:44,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:19:55] 2025-06-03 11:19:44,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:19:55] 2025-06-03 11:19:44,636 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:19:55] 2025-06-03 11:19:44,636 | INFO     | aborting loop
[2025-06-03 07:19:55] 2025-06-03 11:19:44,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:19:55] 2025-06-03 11:19:44,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:19:55] 2025-06-03 11:19:44,710 | INFO     | all job control threads have been joined
[2025-06-03 07:19:55] 2025-06-03 11:19:44,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:19:55] 2025-06-03 11:19:45,267 | INFO     | all data control threads have been joined
[2025-06-03 07:19:55] 2025-06-03 11:19:45,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:19:55] 2025-06-03 11:19:45,638 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:45,641 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:45,642 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:45,715 | INFO     | [job] control thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:45,724 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:45,727 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:45,830 | INFO     | all payload control threads have been joined
[2025-06-03 07:19:55] 2025-06-03 11:19:45,850 | INFO     | [job] validate thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:45,963 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:46,231 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:46,269 | INFO     | [data] control thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:46,354 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:46,354 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:46,756 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:46,820 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:46,836 | INFO     | [payload] control thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:49,393 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:19:55] 2025-06-03 11:19:50,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888344811328)>', '<ExcThread(monitor, started 139887973996288)>']
[2025-06-03 07:19:55] 2025-06-03 11:19:50,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:19:55] 2025-06-03 11:19:50,667 | INFO     | [monitor] control thread has ended
[2025-06-03 07:19:55] 2025-06-03 11:19:55,142 | INFO     | all workflow threads have been joined
[2025-06-03 07:19:55] 2025-06-03 11:19:55,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:19:55] 2025-06-03 11:19:55,142 | INFO     | traces error code: 0
[2025-06-03 07:19:55] 2025-06-03 11:19:55,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:19:55] 2025-06-03 11:19:55,244 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:19:55] 2025-06-03 11:19:55,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:19:55] 2025-06-03 11:19:55,250 [wrapper] pilotpid: 2903048
[2025-06-03 07:19:55] 2025-06-03 11:19:55,252 [wrapper] Pilot exit status: 0
[2025-06-03 07:19:55] 2025-06-03 11:19:55,261 [wrapper] pandaids: 6677495545
[2025-06-03 07:19:55] 2025-06-03 11:19:55,354 [wrapper] cleanup supervisor_pilot 3154195 2903049
[2025-06-03 07:19:55] 2025-06-03 11:19:55,357 [wrapper] Test setup, not cleaning
[2025-06-03 07:19:55] 2025-06-03 11:19:55,359 [wrapper] apfmon messages muted
[2025-06-03 07:19:55] 2025-06-03 11:19:55,360 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:19:55] 2025-06-03 11:19:55,362 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:19:55]  *** Error codes and diagnostics ***
[2025-06-03 07:19:55]     "exeErrorCode": 0,
[2025-06-03 07:19:55]     "exeErrorDiag": "",
[2025-06-03 07:19:55]     "pilotErrorCode": 0,
[2025-06-03 07:19:55]     "pilotErrorDiag": "",
[2025-06-03 07:19:55]  *** Listing of results directory ***
[2025-06-03 07:19:55] total 388932
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 02:33 pilot3.tar.gz
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 02:42 queuedata.json
[2025-06-03 07:19:55] -rwx------. 1 boincer umatlas     37140 Jun  3 02:42 runpilot2-wrapper.sh
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas       100 Jun  3 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:19:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 06:27 run_atlas
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas       105 Jun  3 06:27 job.xml
[2025-06-03 07:19:55] -rw-r--r--. 2 boincer umatlas 215581851 Jun  3 06:27 EVNT.45006593._000913.pool.root.1
[2025-06-03 07:19:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:27 start_atlas.sh
[2025-06-03 07:19:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 06:27 shared
[2025-06-03 07:19:55] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 06:27 input.tar.gz
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas         0 Jun  3 06:27 boinc_lockfile
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas      2521 Jun  3 06:27 pandaJob.out
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas    984355 Jun  3 06:27 agis_schedconf.cvmfs.json
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas   1603667 Jun  3 06:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:19:55] drwx------. 4 boincer umatlas      4096 Jun  3 06:27 pilot3
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas      6935 Jun  3 07:10 init_data.xml
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas 177652948 Jun  3 07:19 HITS.45006595._022808.pool.root.1
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas       530 Jun  3 07:19 boinc_task_state.xml
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas      1026 Jun  3 07:19 memory_monitor_summary.json
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas        95 Jun  3 07:19 pilot_heartbeat.json
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas    273008 Jun  3 07:19 log.45006595._022808.job.log.tgz.1
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas      7677 Jun  3 07:19 heartbeat.json
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 07:19 boinc_mmap_file
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas        27 Jun  3 07:19 wrapper_checkpoint.txt
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas      4476 Jun  3 07:19 pilotlog.txt
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas    325710 Jun  3 07:19 log.45006595._022808.job.log.1
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas       357 Jun  3 07:19 output.list
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas       620 Jun  3 07:19 runtime_log
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas    614400 Jun  3 07:19 result.tar.gz
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 07:19 runtime_log.err
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas       649 Jun  3 07:19 4EXNDmRXag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAgXKDm9aYOcn.diag
[2025-06-03 07:19:55] -rw-r--r--. 1 boincer umatlas     21028 Jun  3 07:19 stderr.txt
[2025-06-03 07:19:55] HITS file was successfully produced:
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas 177652948 Jun  3 07:19 shared/HITS.pool.root.1
[2025-06-03 07:19:55]  *** Contents of shared directory: ***
[2025-06-03 07:19:55] total 385148
[2025-06-03 07:19:55] -rw-r--r--. 2 boincer umatlas 215581851 Jun  3 06:27 ATLAS.root_0
[2025-06-03 07:19:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:27 start_atlas.sh
[2025-06-03 07:19:55] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 06:27 input.tar.gz
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas 177652948 Jun  3 07:19 HITS.pool.root.1
[2025-06-03 07:19:55] -rw-------. 1 boincer umatlas    614400 Jun  3 07:19 result.tar.gz
07:19:56 (2899307): run_atlas exited; CPU time 20377.500505
07:19:56 (2899307): called boinc_finish(0)

</stderr_txt>
]]>

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