Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:54 (3515): wrapper (7.7.26015): starting
06:32:54 (3515): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:32:54] Arguments: --nthreads 8
[2025-06-03 06:32:54] Threads: 8
[2025-06-03 06:32:54] Checking for CVMFS
[2025-06-03 06:32:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:32:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:32:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:32:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:32:54] 2.11.2.0 2817 34126 76440 146739 0 58 12336412 20275201 1 130560 0 10981305 99.946 5985167 7508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 06:32:54] CVMFS is ok
[2025-06-03 06:32:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:32:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:32:54] Further information can be found at the LHC@home message board.
[2025-06-03 06:32:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:32:54] Checking for apptainer binary...
[2025-06-03 06:32:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:32:54] Running /usr/bin/apptainer --version
[2025-06-03 06:32:54] apptainer version 1.3.2-1.el7
[2025-06-03 06:32:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:32:56] c-204-21.aglt2.org
[2025-06-03 06:32:56] apptainer works
[2025-06-03 06:32:56] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:32:56] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:32:56] Starting ATLAS job with PandaID=6677520109
[2025-06-03 06:32:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:28:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:28:11] 2025-06-03 12:27:51,639 | INFO     | extracted standard info from prmon json
[2025-06-03 08:28:11] 2025-06-03 12:27:51,639 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:28:11] 2025-06-03 12:27:51,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:28:11] 2025-06-03 12:27:51,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:28:11] 2025-06-03 12:27:51,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:28:11] 2025-06-03 12:27:51,649 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:28:11] 2025-06-03 12:27:51,649 | INFO     | sum of square deviations: 435610028.0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,650 | INFO     | sum of deviations: 2453847793.0000024
[2025-06-03 08:28:11] 2025-06-03 12:27:51,651 | INFO     | mean x: 1748950211.5
[2025-06-03 08:28:11] 2025-06-03 12:27:51,651 | INFO     | mean y: 2513475.0714285714
[2025-06-03 08:28:11] 2025-06-03 12:27:51,651 | INFO     | -- intersect: -9849549931.871449
[2025-06-03 08:28:11] 2025-06-03 12:27:51,651 | INFO     | intersect: -9849549931.871449
[2025-06-03 08:28:11] 2025-06-03 12:27:51,652 | INFO     | chi2: 1.632201379688679
[2025-06-03 08:28:11] 2025-06-03 12:27:51,652 | INFO     | sum of square deviations: 379832238.0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,653 | INFO     | sum of deviations: 2634943128.999989
[2025-06-03 08:28:11] 2025-06-03 12:27:51,653 | INFO     | mean x: 1748950059.0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,653 | INFO     | mean y: 2513970.5887850467
[2025-06-03 08:28:11] 2025-06-03 12:27:51,653 | INFO     | -- intersect: -12130168513.635145
[2025-06-03 08:28:11] 2025-06-03 12:27:51,654 | INFO     | intersect: -12130168513.635145
[2025-06-03 08:28:11] 2025-06-03 12:27:51,654 | INFO     | chi2: 1.6346987848225225
[2025-06-03 08:28:11] 2025-06-03 12:27:51,654 | INFO     | current chi2=1.6346987848225225 (change=-0.15300839497635413 %)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,654 | INFO     | right removable region: 106
[2025-06-03 08:28:11] 2025-06-03 12:27:51,654 | INFO     | sum of square deviations: 379832238.0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,655 | INFO     | sum of deviations: -14358889856.999998
[2025-06-03 08:28:11] 2025-06-03 12:27:51,655 | INFO     | mean x: 1748950364.0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,655 | INFO     | mean y: 2558489.140186916
[2025-06-03 08:28:11] 2025-06-03 12:27:51,656 | INFO     | -- intersect: 66118551629.34346
[2025-06-03 08:28:11] 2025-06-03 12:27:51,656 | INFO     | intersect: 66118551629.34346
[2025-06-03 08:28:11] 2025-06-03 12:27:51,656 | INFO     | chi2: 0.12595031149329305
[2025-06-03 08:28:11] 2025-06-03 12:27:51,656 | INFO     | current chi2=0.12595031149329305 (change=92.2834085878964 %)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,656 | INFO     | sum of square deviations: 329031285.5
[2025-06-03 08:28:11] 2025-06-03 12:27:51,657 | INFO     | sum of deviations: -13780241295.0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,657 | INFO     | mean x: 1748950516.5
[2025-06-03 08:28:11] 2025-06-03 12:27:51,657 | INFO     | mean y: 2556582.901960784
[2025-06-03 08:28:11] 2025-06-03 12:27:51,657 | INFO     | -- intersect: 73250789175.01175
[2025-06-03 08:28:11] 2025-06-03 12:27:51,657 | INFO     | intersect: 73250789175.01175
[2025-06-03 08:28:11] 2025-06-03 12:27:51,658 | INFO     | chi2: 0.1052751460941229
[2025-06-03 08:28:11] 2025-06-03 12:27:51,658 | INFO     | current chi2=0.1052751460941229 (change=16.415334868204052 %)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,658 | INFO     | left removable region: 20
[2025-06-03 08:28:11] 2025-06-03 12:27:51,658 | INFO     | sum of square deviations: 197203697.5
[2025-06-03 08:28:11] 2025-06-03 12:27:51,659 | INFO     | sum of deviations: -6971057247.0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,659 | INFO     | mean x: 1748950638.5
[2025-06-03 08:28:11] 2025-06-03 12:27:51,659 | INFO     | mean y: 2536806.4418604653
[2025-06-03 08:28:11] 2025-06-03 12:27:51,659 | INFO     | -- intersect: 61827113007.20352
[2025-06-03 08:28:11] 2025-06-03 12:27:51,659 | INFO     | intersect: 61827113007.20352
[2025-06-03 08:28:11] 2025-06-03 12:27:51,659 | INFO     | chi2: 0.08697444966234659
[2025-06-03 08:28:11] 2025-06-03 12:27:51,660 | INFO     | -- intersect: 61827113007.20352
[2025-06-03 08:28:11] 2025-06-03 12:27:51,660 | INFO     | current memory leak: -35.35 B/s (using 86 data points, chi2=0.09)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,660 | INFO     | ..............................
[2025-06-03 08:28:11] 2025-06-03 12:27:51,661 | INFO     | . Timing measurements:
[2025-06-03 08:28:11] 2025-06-03 12:27:51,661 | INFO     | . get job = 0 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,661 | INFO     | . initial setup = 2 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,661 | INFO     | . payload setup = 11 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,661 | INFO     | . stage-in = 0 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,661 | INFO     | . payload execution = 6836 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,662 | INFO     | . stage-out = 0 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,662 | INFO     | . log creation = 0 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,662 | INFO     | sufficient remaining disk space (18596495360 B)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,662 | INFO     | ..............................
[2025-06-03 08:28:11] 2025-06-03 12:27:51,663 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,758 | INFO     | 
[2025-06-03 08:28:11] 2025-06-03 12:27:51,759 | INFO     | job summary report
[2025-06-03 08:28:11] 2025-06-03 12:27:51,759 | INFO     | --------------------------------------------------
[2025-06-03 08:28:11] 2025-06-03 12:27:51,759 | INFO     | PanDA job id: 6677520109
[2025-06-03 08:28:11] 2025-06-03 12:27:51,760 | INFO     | task id: 45006595
[2025-06-03 08:28:11] 2025-06-03 12:27:51,760 | INFO     | errors: (none)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:28:11] 2025-06-03 12:27:51,760 | INFO     | pilot state: finished 
[2025-06-03 08:28:11] 2025-06-03 12:27:51,760 | INFO     | transexitcode: 0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,761 | INFO     | exeerrorcode: 0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,761 | INFO     | exeerrordiag: 
[2025-06-03 08:28:11] 2025-06-03 12:27:51,761 | INFO     | exitcode: 0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,761 | INFO     | exitmsg: OK
[2025-06-03 08:28:11] 2025-06-03 12:27:51,762 | INFO     | cpuconsumptiontime: 50549 s
[2025-06-03 08:28:11] 2025-06-03 12:27:51,762 | INFO     | nevents: 400
[2025-06-03 08:28:11] 2025-06-03 12:27:51,762 | INFO     | neventsw: 0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,762 | INFO     | pid: 13641
[2025-06-03 08:28:11] 2025-06-03 12:27:51,762 | INFO     | pgrp: 13641
[2025-06-03 08:28:11] 2025-06-03 12:27:51,763 | INFO     | corecount: 8
[2025-06-03 08:28:11] 2025-06-03 12:27:51,763 | INFO     | event service: False
[2025-06-03 08:28:11] 2025-06-03 12:27:51,763 | INFO     | sizes: {0: 2405011, 1: 2405210, 7: 2405416, 12: 2405444, 6851: 2432424, 6852: 2441365, 6855: 2441549, 6863: 2441719}
[2025-06-03 08:28:11] 2025-06-03 12:27:51,763 | INFO     | --------------------------------------------------
[2025-06-03 08:28:11] 2025-06-03 12:27:51,763 | INFO     | 
[2025-06-03 08:28:11] 2025-06-03 12:27:51,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 08:28:11] 2025-06-03 12:27:51,768 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6677520109: 3531448 B (within 2537553920 B limit)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,769 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6677520109/HITS.45006595._024949.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,770 | INFO     | total size of present files: 0 B (workdir size: 3531448 B)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,770 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6677520109/HITS.45006595._024949.pool.root.1 since it does not exist
[2025-06-03 08:28:11] 2025-06-03 12:27:51,792 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,793 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,793 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,793 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,794 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,794 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,794 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,797 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:28:11] 2025-06-03 12:27:51,797 | INFO     | job 6677520109 has completed (purged errors)
[2025-06-03 08:28:11] 2025-06-03 12:27:51,797 | INFO     | overall cleanup function is called
[2025-06-03 08:28:11] 2025-06-03 12:27:51,869 | INFO     | number of running child processes to parent process 13641: 1
[2025-06-03 08:28:11] 2025-06-03 12:27:51,869 | INFO     | maximum number of monitored processes: 6
[2025-06-03 08:28:11] 2025-06-03 12:27:51,870 | INFO     | aborting job monitoring since job object (job id=6677520109) has expired
[2025-06-03 08:28:11] 2025-06-03 12:27:52,804 | INFO     | --- collectZombieJob: --- 10, [13641]
[2025-06-03 08:28:11] 2025-06-03 12:27:52,804 | INFO     | zombie collector waiting for pid 13641
[2025-06-03 08:28:11] 2025-06-03 12:27:52,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:28:11] 2025-06-03 12:27:52,805 | INFO     | collected zombie processes
[2025-06-03 08:28:11] 2025-06-03 12:27:52,805 | INFO     | will attempt to kill all subprocesses of pid=13641
[2025-06-03 08:28:11] 2025-06-03 12:27:52,893 | INFO     | process IDs to be killed: [13641] (in reverse order)
[2025-06-03 08:28:11] 2025-06-03 12:27:52,951 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:28:11] 2025-06-03 12:27:52,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:28:11] 2025-06-03 12:27:52,956 | INFO     | did not find any defunct processes belonging to 13641
[2025-06-03 08:28:11] 2025-06-03 12:27:52,960 | INFO     | did not find any defunct processes belonging to 13641
[2025-06-03 08:28:11] 2025-06-03 12:27:52,960 | INFO     | ready for new job
[2025-06-03 08:28:11] 2025-06-03 12:27:52,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:28:11] 2025-06-03 12:27:52,962 | INFO     | **************************************
[2025-06-03 08:28:11] 2025-06-03 12:27:52,963 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:28:11] 2025-06-03 12:27:52,963 | INFO     | **************************************
[2025-06-03 08:28:11] 2025-06-03 12:27:52,963 | INFO     | 
[2025-06-03 08:28:11] 2025-06-03 12:27:52,964 | INFO     | architecture information:
[2025-06-03 08:28:11] 2025-06-03 12:27:52,964 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:28:11] 2025-06-03 12:27:52,982 | INFO     | cat /etc/os-release:
[2025-06-03 08:28:11] NAME="CentOS Linux"
[2025-06-03 08:28:11] VERSION="7 (Core)"
[2025-06-03 08:28:11] ID="centos"
[2025-06-03 08:28:11] ID_LIKE="rhel fedora"
[2025-06-03 08:28:11] VERSION_ID="7"
[2025-06-03 08:28:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:28:11] ANSI_COLOR="0;31"
[2025-06-03 08:28:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:28:11] HOME_URL="https://www.centos.org/"
[2025-06-03 08:28:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:28:11] 
[2025-06-03 08:28:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:28:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:28:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:28:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:28:11] 
[2025-06-03 08:28:11] 2025-06-03 12:27:52,983 | INFO     | **************************************
[2025-06-03 08:28:11] 2025-06-03 12:27:53,486 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 08:28:11] 2025-06-03 12:27:53,506 | INFO     | sufficient remaining disk space (18600689664 B)
[2025-06-03 08:28:11] 2025-06-03 12:27:53,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:28:11] 2025-06-03 12:27:53,507 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:28:11] 2025-06-03 12:27:53,507 | INFO     | update_server=False
[2025-06-03 08:28:11] 2025-06-03 12:27:53,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:28:11] 2025-06-03 12:27:53,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:28:11] 2025-06-03 12:27:53,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:28:11] 2025-06-03 12:27:53,508 | INFO     | aborting loop
[2025-06-03 08:28:11] 2025-06-03 12:27:53,755 | INFO     | all job control threads have been joined
[2025-06-03 08:28:11] 2025-06-03 12:27:53,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:28:11] 2025-06-03 12:27:54,154 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:28:11] 2025-06-03 12:27:54,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:28:11] 2025-06-03 12:27:54,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:28:11] 2025-06-03 12:27:54,247 | INFO     | all data control threads have been joined
[2025-06-03 08:28:11] 2025-06-03 12:27:54,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:28:11] 2025-06-03 12:27:54,513 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:54,513 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:54,514 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:54,572 | INFO     | all payload control threads have been joined
[2025-06-03 08:28:11] 2025-06-03 12:27:54,680 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:54,761 | INFO     | [job] control thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,251 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,252 | INFO     | [data] control thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,266 | INFO     | [job] validate thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,570 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,577 | INFO     | [payload] control thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,613 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,627 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,661 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:55,827 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:27:58,489 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:28:04,366 | INFO     | job.realtimelogging is not enabled
[2025-06-03 08:28:11] 2025-06-03 12:28:05,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:28:11] 2025-06-03 12:28:06,180 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701080905536)>', '<ExcThread(monitor, started 140699974498048)>']
[2025-06-03 08:28:11] 2025-06-03 12:28:06,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:28:11] 2025-06-03 12:28:06,211 | INFO     | [monitor] control thread has ended
[2025-06-03 08:28:11] 2025-06-03 12:28:11,181 | INFO     | all workflow threads have been joined
[2025-06-03 08:28:11] 2025-06-03 12:28:11,181 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:28:11] 2025-06-03 12:28:11,182 | INFO     | traces error code: 0
[2025-06-03 08:28:11] 2025-06-03 12:28:11,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:28:11] 2025-06-03 12:28:11,308 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:28:11] 2025-06-03 12:28:11,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:28:11] 2025-06-03 12:28:11,317 [wrapper] pilotpid: 7229
[2025-06-03 08:28:11] 2025-06-03 12:28:11,321 [wrapper] Pilot exit status: 0
[2025-06-03 08:28:11] 2025-06-03 12:28:11,341 [wrapper] pandaids: 6677520109
[2025-06-03 08:28:11] 2025-06-03 12:28:11,383 [wrapper] cleanup supervisor_pilot 16243 7230
[2025-06-03 08:28:11] 2025-06-03 12:28:11,388 [wrapper] Test setup, not cleaning
[2025-06-03 08:28:11] 2025-06-03 12:28:11,393 [wrapper] apfmon messages muted
[2025-06-03 08:28:11] 2025-06-03 12:28:11,397 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:28:11] 2025-06-03 12:28:11,401 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:28:11]  *** Error codes and diagnostics ***
[2025-06-03 08:28:11]     "exeErrorCode": 0,
[2025-06-03 08:28:11]     "exeErrorDiag": "",
[2025-06-03 08:28:11]     "pilotErrorCode": 0,
[2025-06-03 08:28:11]     "pilotErrorDiag": "",
[2025-06-03 08:28:11]  *** Listing of results directory ***
[2025-06-03 08:28:11] total 396404
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 03:38 pilot3.tar.gz
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 03:58 queuedata.json
[2025-06-03 08:28:11] -rwx------ 1 boincer umatlas     37140 Jun  3 04:00 runpilot2-wrapper.sh
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas       100 Jun  3 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:28:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 06:32 run_atlas
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas       105 Jun  3 06:32 job.xml
[2025-06-03 08:28:11] -rw-r--r-- 2 boincer umatlas 215351912 Jun  3 06:32 EVNT.45006593._000998.pool.root.1
[2025-06-03 08:28:11] -rw-r--r-- 2 boincer umatlas    508884 Jun  3 06:32 input.tar.gz
[2025-06-03 08:28:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:32 start_atlas.sh
[2025-06-03 08:28:11] drwxrwx--x 2 boincer umatlas      4096 Jun  3 06:32 shared
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas         0 Jun  3 06:32 boinc_lockfile
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 06:32 pandaJob.out
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas    984355 Jun  3 06:33 agis_schedconf.cvmfs.json
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas   1603667 Jun  3 06:33 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:28:11] drwx------ 4 boincer umatlas      4096 Jun  3 06:33 pilot3
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas      5905 Jun  3 08:21 init_data.xml
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas 184822503 Jun  3 08:27 HITS.45006595._024949.pool.root.1
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas       529 Jun  3 08:27 boinc_task_state.xml
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas      1049 Jun  3 08:27 memory_monitor_summary.json
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas    322856 Jun  3 08:27 log.45006595._024949.job.log.tgz.1
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 08:27 boinc_mmap_file
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas        27 Jun  3 08:27 wrapper_checkpoint.txt
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas        95 Jun  3 08:27 pilot_heartbeat.json
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas      7750 Jun  3 08:27 heartbeat.json
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas      4425 Jun  3 08:28 pilotlog.txt
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas    631841 Jun  3 08:28 log.45006595._024949.job.log.1
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas       357 Jun  3 08:28 output.list
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas       620 Jun  3 08:28 runtime_log
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas    972800 Jun  3 08:28 result.tar.gz
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 08:28 runtime_log.err
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas       659 Jun  3 08:28 3FpNDmmkbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzpiKDmYcytSm.diag
[2025-06-03 08:28:11] -rw-r--r-- 1 boincer umatlas     21165 Jun  3 08:28 stderr.txt
[2025-06-03 08:28:11] HITS file was successfully produced:
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas 184822503 Jun  3 08:27 shared/HITS.pool.root.1
[2025-06-03 08:28:11]  *** Contents of shared directory: ***
[2025-06-03 08:28:11] total 392272
[2025-06-03 08:28:11] -rw-r--r-- 2 boincer umatlas 215351912 Jun  3 06:32 ATLAS.root_0
[2025-06-03 08:28:11] -rw-r--r-- 2 boincer umatlas    508884 Jun  3 06:32 input.tar.gz
[2025-06-03 08:28:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:32 start_atlas.sh
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas 184822503 Jun  3 08:27 HITS.pool.root.1
[2025-06-03 08:28:11] -rw------- 1 boincer umatlas    972800 Jun  3 08:28 result.tar.gz
08:28:12 (3515): run_atlas exited; CPU time 50493.493178
08:28:12 (3515): called boinc_finish(0)

</stderr_txt>
]]>

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