Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:26:51 (3561350): wrapper (7.7.26015): starting
06:26:51 (3561350): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:26:51] Arguments: --nthreads 8
[2025-06-03 06:26:51] Threads: 8
[2025-06-03 06:26:51] Checking for CVMFS
[2025-06-03 06:26:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:26:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:26:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:26:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:26:51] 2.12.6.0 8763 31225 582704 146739 2 197 17699888 32935936 13379 16776704 0 428737611 99.664 363649225 36948 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 06:26:51] CVMFS is ok
[2025-06-03 06:26:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:26:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:26:51] Further information can be found at the LHC@home message board.
[2025-06-03 06:26:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:26:51] Checking for apptainer binary...
[2025-06-03 06:26:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:26:51] Running /usr/bin/apptainer --version
[2025-06-03 06:26:51] apptainer version 1.4.1-1.el9
[2025-06-03 06:26:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:26:51] c7-9-14.aglt2.org
[2025-06-03 06:26:51] apptainer works
[2025-06-03 06:26:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:26:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:26:51] Starting ATLAS job with PandaID=6666448445
[2025-06-03 06:26:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:34:30]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:34:30]  is_tar=False
[2025-06-03 07:34:30]  lfn=log.44871837._057956.job.log.tgz.1
[2025-06-03 07:34:30]  mtime=0
[2025-06-03 07:34:30]  protocol_id=None
[2025-06-03 07:34:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 07:34:30]  replicas=None
[2025-06-03 07:34:30]  scope=mc23_13p6TeV
[2025-06-03 07:34:30]  status=None
[2025-06-03 07:34:30]  status_code=0
[2025-06-03 07:34:30]  storage_token=
[2025-06-03 07:34:30]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6666448445/log.44871837._057956.job.log.tgz.1
[2025-06-03 07:34:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/d8/log.44871837._057956.job.log.tgz.1
[2025-06-03 07:34:30]  workdir=None
[2025-06-03 07:34:30] ]
[2025-06-03 07:34:30] 2025-06-03 11:34:05,466 | INFO     | transferring file log.44871837._057956.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6666448445/log.44871837._057956.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 07:34:30] 2025-06-03 11:34:05,466 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6666448445/log.44871837._057956.job.log.tgz.1 /tmp/boinchome/slots/3/log.44871837._057956.job
[2025-06-03 07:34:30] 2025-06-03 11:34:05,481 | INFO     | adding to output.list: log.44871837._057956.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/d8/log.44871837._057956.job.log.tg
[2025-06-03 07:34:30] 2025-06-03 11:34:05,482 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 07:34:30] 2025-06-03 11:34:05,482 | INFO     | summary of transferred files:
[2025-06-03 07:34:30] 2025-06-03 11:34:05,482 | INFO     |  -- lfn=log.44871837._057956.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 07:34:30] 2025-06-03 11:34:05,482 | INFO     | stage-out finished correctly
[2025-06-03 07:34:30] 2025-06-03 11:34:07,494 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 07:34:30] 2025-06-03 11:34:07,548 | INFO     | job 6666448445 has state=finished
[2025-06-03 07:34:30] 2025-06-03 11:34:07,549 | INFO     | preparing for final server update for job 6666448445 in state='finished'
[2025-06-03 07:34:30] 2025-06-03 11:34:07,549 | INFO     | this job has now completed (state=finished)
[2025-06-03 07:34:30] 2025-06-03 11:34:07,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 07:34:30] 2025-06-03 11:34:07,549 | INFO     | log transfer has been attempted: DONE
[2025-06-03 07:34:30] 2025-06-03 11:34:07,549 | INFO     | job 6666448445 has finished - writing final server update
[2025-06-03 07:34:30] 2025-06-03 11:34:07,549 | INFO     | total number of processed events: 400 (read)
[2025-06-03 07:34:30] 2025-06-03 11:34:07,567 | INFO     | executing command: lscpu
[2025-06-03 07:34:30] 2025-06-03 11:34:07,656 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 07:34:30] 2025-06-03 11:34:08,230 | INFO     | PID=3565037 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 07:34:30] 2025-06-03 11:34:08,230 | INFO     | .. there are 18 such processes running
[2025-06-03 07:34:30] 2025-06-03 11:34:10,559 | WARNING  | process 3573544 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 07:34:30] 2025-06-03 11:34:10,559 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6666448445/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:34:30] 2025-06-03 11:34:10,866 | INFO     | number of running child processes to parent process 3573544: 1
[2025-06-03 07:34:30] 2025-06-03 11:34:10,866 | INFO     | maximum number of monitored processes: 6
[2025-06-03 07:34:30] 2025-06-03 11:34:11,040 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 07:34:30] 2025-06-03 11:34:11,041 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6666448445/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:34:30] 2025-06-03 11:34:11,041 | INFO     | extracted standard info from prmon json
[2025-06-03 07:34:30] 2025-06-03 11:34:11,041 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:34:30] 2025-06-03 11:34:11,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:34:30] 2025-06-03 11:34:11,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:34:30] 2025-06-03 11:34:11,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:34:30] 2025-06-03 11:34:11,042 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | sum of square deviations: 63666310.0
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | sum of deviations: 7779969768.0
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | mean x: 1748948513.0
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | mean y: 2126373.474576271
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | -- intersect: -213717917350.25552
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | intersect: -213717917350.25552
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | chi2: 0.8794024858119591
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | -- intersect: -213717917350.25552
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | current memory leak: 122.20 B/s (using 59 data points, chi2=0.88)
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | ..............................
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | . Timing measurements:
[2025-06-03 07:34:30] 2025-06-03 11:34:11,043 | INFO     | . get job = 0 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,044 | INFO     | . initial setup = 2 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,044 | INFO     | . payload setup = 3 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,044 | INFO     | . stage-in = 0 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,044 | INFO     | . payload execution = 4006 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,044 | INFO     | . stage-out = 0 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,044 | INFO     | . log creation = 0 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,044 | INFO     | ..............................
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | 
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | job summary report
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | --------------------------------------------------
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | PanDA job id: 6666448445
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | task id: 44871837
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | errors: (none)
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | pilot state: finished 
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | transexitcode: 0
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | exeerrorcode: 0
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | exeerrordiag: 
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | exitcode: 0
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | exitmsg: OK
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | cpuconsumptiontime: 26597 s
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | nevents: 400
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | neventsw: 0
[2025-06-03 07:34:30] 2025-06-03 11:34:11,099 | INFO     | pid: 3573544
[2025-06-03 07:34:30] 2025-06-03 11:34:11,100 | INFO     | pgrp: 3573544
[2025-06-03 07:34:30] 2025-06-03 11:34:11,100 | INFO     | corecount: 8
[2025-06-03 07:34:30] 2025-06-03 11:34:11,100 | INFO     | event service: False
[2025-06-03 07:34:30] 2025-06-03 11:34:11,100 | INFO     | sizes: {0: 2405061, 1: 2405260, 3: 2405466, 11: 2405494, 4013: 2431326, 4014: 2440267, 4016: 2440451, 4019: 2440621}
[2025-06-03 07:34:30] 2025-06-03 11:34:11,100 | INFO     | --------------------------------------------------
[2025-06-03 07:34:30] 2025-06-03 11:34:11,100 | INFO     | 
[2025-06-03 07:34:30] 2025-06-03 11:34:11,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 07:34:30] 2025-06-03 11:34:11,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | job 6666448445 has completed (purged errors)
[2025-06-03 07:34:30] 2025-06-03 11:34:11,117 | INFO     | overall cleanup function is called
[2025-06-03 07:34:30] 2025-06-03 11:34:12,123 | INFO     | --- collectZombieJob: --- 10, [3573544]
[2025-06-03 07:34:30] 2025-06-03 11:34:12,123 | INFO     | zombie collector waiting for pid 3573544
[2025-06-03 07:34:30] 2025-06-03 11:34:12,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:34:30] 2025-06-03 11:34:12,124 | INFO     | collected zombie processes
[2025-06-03 07:34:30] 2025-06-03 11:34:12,124 | INFO     | will attempt to kill all subprocesses of pid=3573544
[2025-06-03 07:34:30] 2025-06-03 11:34:12,429 | INFO     | process IDs to be killed: [3573544] (in reverse order)
[2025-06-03 07:34:30] 2025-06-03 11:34:12,541 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:34:30] 2025-06-03 11:34:12,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:34:30] 2025-06-03 11:34:12,557 | INFO     | did not find any defunct processes belonging to 3573544
[2025-06-03 07:34:30] 2025-06-03 11:34:12,568 | INFO     | did not find any defunct processes belonging to 3573544
[2025-06-03 07:34:30] 2025-06-03 11:34:12,569 | INFO     | ready for new job
[2025-06-03 07:34:30] 2025-06-03 11:34:12,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:34:30] 2025-06-03 11:34:12,570 | INFO     | **************************************
[2025-06-03 07:34:30] 2025-06-03 11:34:12,570 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:34:30] 2025-06-03 11:34:12,570 | INFO     | **************************************
[2025-06-03 07:34:30] 2025-06-03 11:34:12,570 | INFO     | 
[2025-06-03 07:34:30] 2025-06-03 11:34:12,587 | INFO     | architecture information:
[2025-06-03 07:34:30] 2025-06-03 11:34:12,587 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:34:30] 2025-06-03 11:34:12,599 | INFO     | cat /etc/os-release:
[2025-06-03 07:34:30] NAME="CentOS Linux"
[2025-06-03 07:34:30] VERSION="7 (Core)"
[2025-06-03 07:34:30] ID="centos"
[2025-06-03 07:34:30] ID_LIKE="rhel fedora"
[2025-06-03 07:34:30] VERSION_ID="7"
[2025-06-03 07:34:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:34:30] ANSI_COLOR="0;31"
[2025-06-03 07:34:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:34:30] HOME_URL="https://www.centos.org/"
[2025-06-03 07:34:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:34:30] 
[2025-06-03 07:34:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:34:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:34:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:34:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:34:30] 
[2025-06-03 07:34:30] 2025-06-03 11:34:12,600 | INFO     | **************************************
[2025-06-03 07:34:30] 2025-06-03 11:34:13,102 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 07:34:30] 2025-06-03 11:34:13,115 | INFO     | sufficient remaining disk space (68266491904 B)
[2025-06-03 07:34:30] 2025-06-03 11:34:13,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:34:30] 2025-06-03 11:34:13,116 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:34:30] 2025-06-03 11:34:13,116 | INFO     | update_server=False
[2025-06-03 07:34:30] 2025-06-03 11:34:13,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:34:30] 2025-06-03 11:34:13,116 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:34:30] 2025-06-03 11:34:13,118 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:34:30] 2025-06-03 11:34:13,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:34:30] 2025-06-03 11:34:13,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:34:30] 2025-06-03 11:34:13,265 | INFO     | all payload control threads have been joined
[2025-06-03 07:34:30] 2025-06-03 11:34:13,369 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 07:34:30] 2025-06-03 11:34:13,369 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 07:34:30] 2025-06-03 11:34:13,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:34:30] 2025-06-03 11:34:13,370 | INFO     | will abort loop
[2025-06-03 07:34:30] 2025-06-03 11:34:13,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:34:30] 2025-06-03 11:34:13,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:34:30] 2025-06-03 11:34:13,777 | INFO     | all data control threads have been joined
[2025-06-03 07:34:30] 2025-06-03 11:34:14,121 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:14,271 | INFO     | [payload] control thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:14,371 | INFO     | all job control threads have been joined
[2025-06-03 07:34:30] 2025-06-03 11:34:14,375 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:14,782 | INFO     | [data] control thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:14,852 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,031 | INFO     | [job] validate thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,085 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,244 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,245 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,372 | INFO     | [job] control thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,517 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,546 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:15,558 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:16,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:34:30] 2025-06-03 11:34:17,116 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:17,564 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:23,896 | INFO     | job.realtimelogging is not enabled
[2025-06-03 07:34:30] 2025-06-03 11:34:24,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:34:30] 2025-06-03 11:34:24,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408377272128)>', '<ExcThread(monitor, started 140407446959872)>']
[2025-06-03 07:34:30] 2025-06-03 11:34:25,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:34:30] 2025-06-03 11:34:25,174 | INFO     | [monitor] control thread has ended
[2025-06-03 07:34:30] 2025-06-03 11:34:30,000 | INFO     | all workflow threads have been joined
[2025-06-03 07:34:30] 2025-06-03 11:34:30,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:34:30] 2025-06-03 11:34:30,001 | INFO     | traces error code: 0
[2025-06-03 07:34:30] 2025-06-03 11:34:30,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:34:30] 2025-06-03 11:34:30,106 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:34:30] 2025-06-03 11:34:30,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:34:30] 2025-06-03 11:34:30,110 [wrapper] pilotpid: 3565037
[2025-06-03 07:34:30] 2025-06-03 11:34:30,113 [wrapper] Pilot exit status: 0
[2025-06-03 07:34:30] 2025-06-03 11:34:30,122 [wrapper] pandaids: 6666448445
[2025-06-03 07:34:30] 2025-06-03 11:34:30,196 [wrapper] cleanup supervisor_pilot 3966679 3565038
[2025-06-03 07:34:30] 2025-06-03 11:34:30,198 [wrapper] Test setup, not cleaning
[2025-06-03 07:34:30] 2025-06-03 11:34:30,201 [wrapper] apfmon messages muted
[2025-06-03 07:34:30] 2025-06-03 11:34:30,203 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:34:30] 2025-06-03 11:34:30,205 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:34:30]  *** Error codes and diagnostics ***
[2025-06-03 07:34:30]     "exeErrorCode": 0,
[2025-06-03 07:34:30]     "exeErrorDiag": "",
[2025-06-03 07:34:30]     "pilotErrorCode": 0,
[2025-06-03 07:34:30]     "pilotErrorDiag": "",
[2025-06-03 07:34:30]  *** Listing of results directory ***
[2025-06-03 07:34:30] total 421644
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas    495897 May 26 18:07 pilot3.tar.gz
[2025-06-03 07:34:30] -rwx------. 1 boincer umatlas     37140 May 26 18:37 runpilot2-wrapper.sh
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas      5111 May 26 18:37 queuedata.json
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas       100 Jun  3 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:34:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 06:26 run_atlas
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas       105 Jun  3 06:26 job.xml
[2025-06-03 07:34:30] -rw-r--r--. 2 boincer umatlas 226610725 Jun  3 06:26 EVNT.44871834._002294.pool.root.1
[2025-06-03 07:34:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:26 start_atlas.sh
[2025-06-03 07:34:30] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 06:26 shared
[2025-06-03 07:34:30] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 06:26 input.tar.gz
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas         0 Jun  3 06:26 boinc_lockfile
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas      2558 Jun  3 06:26 pandaJob.out
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas    984355 Jun  3 06:26 agis_schedconf.cvmfs.json
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas   1603667 Jun  3 06:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:34:30] drwx------. 4 boincer umatlas      4096 Jun  3 06:26 pilot3
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas      7161 Jun  3 07:31 init_data.xml
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas 199934776 Jun  3 07:33 HITS.44871837._057956.pool.root.1
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas       529 Jun  3 07:33 boinc_task_state.xml
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas      1031 Jun  3 07:34 memory_monitor_summary.json
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas    286846 Jun  3 07:34 log.44871837._057956.job.log.tgz.1
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas      7687 Jun  3 07:34 heartbeat.json
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas        95 Jun  3 07:34 pilot_heartbeat.json
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 07:34 boinc_mmap_file
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas        27 Jun  3 07:34 wrapper_checkpoint.txt
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas      4734 Jun  3 07:34 pilotlog.txt
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas    403125 Jun  3 07:34 log.44871837._057956.job.log.1
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas       357 Jun  3 07:34 output.list
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas       620 Jun  3 07:34 runtime_log
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas    706560 Jun  3 07:34 result.tar.gz
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas       650 Jun  3 07:34 W1BNDmTcvd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyvQKDmnFiDRn.diag
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 07:34 runtime_log.err
[2025-06-03 07:34:30] -rw-r--r--. 1 boincer umatlas     21556 Jun  3 07:34 stderr.txt
[2025-06-03 07:34:30] HITS file was successfully produced:
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas 199934776 Jun  3 07:33 shared/HITS.pool.root.1
[2025-06-03 07:34:30]  *** Contents of shared directory: ***
[2025-06-03 07:34:30] total 417768
[2025-06-03 07:34:30] -rw-r--r--. 2 boincer umatlas 226610725 Jun  3 06:26 ATLAS.root_0
[2025-06-03 07:34:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 06:26 start_atlas.sh
[2025-06-03 07:34:30] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 06:26 input.tar.gz
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas 199934776 Jun  3 07:33 HITS.pool.root.1
[2025-06-03 07:34:30] -rw-------. 1 boincer umatlas    706560 Jun  3 07:34 result.tar.gz
07:34:31 (3561350): run_atlas exited; CPU time 26686.546803
07:34:31 (3561350): called boinc_finish(0)

</stderr_txt>
]]>

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