Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:36:45 (1617100): wrapper (7.7.26015): starting
04:36:45 (1617100): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 04:36:45] Arguments: --nthreads 4
[2025-06-05 04:36:45] Threads: 4
[2025-06-05 04:36:45] Checking for CVMFS
[2025-06-05 04:36:45] No cvmfs_config command found, will try listing directly
[2025-06-05 04:36:45] CVMFS is ok
[2025-06-05 04:36:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:36:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:36:45] Further information can be found at the LHC@home message board.
[2025-06-05 04:36:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:36:45] Checking for apptainer binary...
[2025-06-05 04:36:45] which: no apptainer in ((null))
[2025-06-05 04:36:45] apptainer is not installed, using version from CVMFS
[2025-06-05 04:36:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:36:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-05 04:36:46] apptainer works
[2025-06-05 04:36:46] Set ATHENA_PROC_NUMBER=4
[2025-06-05 04:36:46] Set ATHENA_CORE_NUMBER=4
[2025-06-05 04:36:46] Starting ATLAS job with PandaID=6677517693
[2025-06-05 04:36:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:33:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:33:21] 2025-06-05 05:32:04,631 | INFO     | total number of processed events: 400 (read)
[2025-06-05 07:33:21] 2025-06-05 05:32:04,636 | INFO     | executing command: lscpu
[2025-06-05 07:33:21] 2025-06-05 05:32:04,701 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 07:33:21] 2025-06-05 05:32:06,085 | INFO     | monitor loop #761: job 0:6677517693 is in state 'finished'
[2025-06-05 07:33:21] 2025-06-05 05:32:06,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:33:21] 2025-06-05 05:32:08,587 | INFO     | monitor loop #762: job 0:6677517693 is in state 'finished'
[2025-06-05 07:33:21] 2025-06-05 05:32:08,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,007 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 07:33:21] 2025-06-05 05:32:09,007 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6677517693/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,008 | INFO     | extracted standard info from prmon json
[2025-06-05 07:33:21] 2025-06-05 05:32:09,008 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:33:21] 2025-06-05 05:32:09,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:33:21] 2025-06-05 05:32:09,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:33:21] 2025-06-05 05:32:09,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:33:21] 2025-06-05 05:32:09,014 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:33:21] 2025-06-05 05:32:09,014 | INFO     | sum of square deviations: 1577789583.0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,015 | INFO     | sum of deviations: -12006208947.499994
[2025-06-05 07:33:21] 2025-06-05 05:32:09,016 | INFO     | mean x: 1749096259.5
[2025-06-05 07:33:21] 2025-06-05 05:32:09,016 | INFO     | mean y: 2356273.9941860465
[2025-06-05 07:33:21] 2025-06-05 05:32:09,016 | INFO     | -- intersect: 13312125451.781738
[2025-06-05 07:33:21] 2025-06-05 05:32:09,016 | INFO     | intersect: 13312125451.781738
[2025-06-05 07:33:21] 2025-06-05 05:32:09,016 | INFO     | chi2: 1.7124227728574428
[2025-06-05 07:33:21] 2025-06-05 05:32:09,017 | INFO     | sum of square deviations: 1444149868.0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,018 | INFO     | sum of deviations: -11363126665.000011
[2025-06-05 07:33:21] 2025-06-05 05:32:09,018 | INFO     | mean x: 1749096107.0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,018 | INFO     | mean y: 2357008.0898203594
[2025-06-05 07:33:21] 2025-06-05 05:32:09,018 | INFO     | -- intersect: 13764917981.504951
[2025-06-05 07:33:21] 2025-06-05 05:32:09,018 | INFO     | intersect: 13764917981.504951
[2025-06-05 07:33:21] 2025-06-05 05:32:09,019 | INFO     | chi2: 1.711021640073583
[2025-06-05 07:33:21] 2025-06-05 05:32:09,019 | INFO     | current chi2=1.711021640073583 (change=0.08182166262142648 %)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,019 | INFO     | right removable region: 166
[2025-06-05 07:33:21] 2025-06-05 05:32:09,019 | INFO     | sum of square deviations: 1444149868.0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,020 | INFO     | sum of deviations: -37091715814.99999
[2025-06-05 07:33:21] 2025-06-05 05:32:09,020 | INFO     | mean x: 1749096412.0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,021 | INFO     | mean y: 2384517.904191617
[2025-06-05 07:33:21] 2025-06-05 05:32:09,021 | INFO     | -- intersect: 44926383393.996
[2025-06-05 07:33:21] 2025-06-05 05:32:09,021 | INFO     | intersect: 44926383393.996
[2025-06-05 07:33:21] 2025-06-05 05:32:09,021 | INFO     | chi2: 0.1652182643094726
[2025-06-05 07:33:21] 2025-06-05 05:32:09,021 | INFO     | current chi2=0.1652182643094726 (change=90.35178304515419 %)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,022 | INFO     | sum of square deviations: 1318277740.5
[2025-06-05 07:33:21] 2025-06-05 05:32:09,023 | INFO     | sum of deviations: -32885686758.999996
[2025-06-05 07:33:21] 2025-06-05 05:32:09,023 | INFO     | mean x: 1749096564.5
[2025-06-05 07:33:21] 2025-06-05 05:32:09,023 | INFO     | mean y: 2379390.1975308643
[2025-06-05 07:33:21] 2025-06-05 05:32:09,023 | INFO     | -- intersect: 43635249736.30047
[2025-06-05 07:33:21] 2025-06-05 05:32:09,023 | INFO     | intersect: 43635249736.30047
[2025-06-05 07:33:21] 2025-06-05 05:32:09,023 | INFO     | chi2: 0.16021711558952076
[2025-06-05 07:33:21] 2025-06-05 05:32:09,023 | INFO     | current chi2=0.16021711558952076 (change=3.026995072762725 %)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,024 | INFO     | left removable region: 20
[2025-06-05 07:33:21] 2025-06-05 05:32:09,024 | INFO     | sum of square deviations: 964976232.5
[2025-06-05 07:33:21] 2025-06-05 05:32:09,025 | INFO     | sum of deviations: -18556276189.000008
[2025-06-05 07:33:21] 2025-06-05 05:32:09,025 | INFO     | mean x: 1749096686.5
[2025-06-05 07:33:21] 2025-06-05 05:32:09,025 | INFO     | mean y: 2362633.1369863013
[2025-06-05 07:33:21] 2025-06-05 05:32:09,025 | INFO     | -- intersect: 33637099016.096302
[2025-06-05 07:33:21] 2025-06-05 05:32:09,025 | INFO     | intersect: 33637099016.096302
[2025-06-05 07:33:21] 2025-06-05 05:32:09,026 | INFO     | chi2: 0.10474497744398702
[2025-06-05 07:33:21] 2025-06-05 05:32:09,026 | INFO     | -- intersect: 33637099016.096302
[2025-06-05 07:33:21] 2025-06-05 05:32:09,026 | INFO     | current memory leak: -19.23 B/s (using 146 data points, chi2=0.10)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,027 | INFO     | ..............................
[2025-06-05 07:33:21] 2025-06-05 05:32:09,027 | INFO     | . Timing measurements:
[2025-06-05 07:33:21] 2025-06-05 05:32:09,027 | INFO     | . get job = 0 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,027 | INFO     | . initial setup = 1 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,027 | INFO     | . payload setup = 7 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,027 | INFO     | . stage-in = 0 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,027 | INFO     | . payload execution = 10476 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,028 | INFO     | . stage-out = 1 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,028 | INFO     | . log creation = 0 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,028 | INFO     | ..............................
[2025-06-05 07:33:21] 2025-06-05 05:32:09,151 | INFO     | 
[2025-06-05 07:33:21] 2025-06-05 05:32:09,151 | INFO     | job summary report
[2025-06-05 07:33:21] 2025-06-05 05:32:09,151 | INFO     | --------------------------------------------------
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | PanDA job id: 6677517693
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | task id: 45006595
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | errors: (none)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | pilot state: finished 
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | transexitcode: 0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | exeerrorcode: 0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | exeerrordiag: 
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | exitcode: 0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,152 | INFO     | exitmsg: OK
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | cpuconsumptiontime: 39384 s
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | nevents: 400
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | neventsw: 0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | pid: 1627778
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | pgrp: 1627778
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | corecount: 4
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | event service: False
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | sizes: {0: 2396512, 1: 2397379, 6: 2397585, 12: 2397613, 10487: 2426098, 10488: 2426097, 10489: 2435244, 10491: 2435300, 10497: 2435470}
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | --------------------------------------------------
[2025-06-05 07:33:21] 2025-06-05 05:32:09,153 | INFO     | 
[2025-06-05 07:33:21] 2025-06-05 05:32:09,154 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-05 07:33:21] 2025-06-05 05:32:09,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,176 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,176 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | job 6677517693 has completed (purged errors)
[2025-06-05 07:33:21] 2025-06-05 05:32:09,178 | INFO     | overall cleanup function is called
[2025-06-05 07:33:21] 2025-06-05 05:32:10,186 | INFO     | --- collectZombieJob: --- 10, [1627778]
[2025-06-05 07:33:21] 2025-06-05 05:32:10,187 | INFO     | zombie collector waiting for pid 1627778
[2025-06-05 07:33:21] 2025-06-05 05:32:10,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:33:21] 2025-06-05 05:32:10,187 | INFO     | collected zombie processes
[2025-06-05 07:33:21] 2025-06-05 05:32:10,187 | INFO     | will attempt to kill all subprocesses of pid=1627778
[2025-06-05 07:33:21] 2025-06-05 05:32:10,581 | INFO     | process IDs to be killed: [1627778] (in reverse order)
[2025-06-05 07:33:21] 2025-06-05 05:32:10,698 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:33:21] 2025-06-05 05:32:10,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:33:21] 2025-06-05 05:32:10,714 | INFO     | did not find any defunct processes belonging to 1627778
[2025-06-05 07:33:21] 2025-06-05 05:32:10,729 | INFO     | did not find any defunct processes belonging to 1627778
[2025-06-05 07:33:21] 2025-06-05 05:32:10,729 | INFO     | ready for new job
[2025-06-05 07:33:21] 2025-06-05 05:32:10,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:33:21] 2025-06-05 05:32:10,731 | INFO     | **************************************
[2025-06-05 07:33:21] 2025-06-05 05:32:10,731 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:33:21] 2025-06-05 05:32:10,731 | INFO     | **************************************
[2025-06-05 07:33:21] 2025-06-05 05:32:10,732 | INFO     | 
[2025-06-05 07:33:21] 2025-06-05 05:32:10,736 | INFO     | architecture information:
[2025-06-05 07:33:21] 2025-06-05 05:32:10,736 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:33:21] 2025-06-05 05:32:10,752 | INFO     | cat /etc/os-release:
[2025-06-05 07:33:21] NAME="CentOS Linux"
[2025-06-05 07:33:21] VERSION="7 (Core)"
[2025-06-05 07:33:21] ID="centos"
[2025-06-05 07:33:21] ID_LIKE="rhel fedora"
[2025-06-05 07:33:21] VERSION_ID="7"
[2025-06-05 07:33:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:33:21] ANSI_COLOR="0;31"
[2025-06-05 07:33:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:33:21] HOME_URL="https://www.centos.org/"
[2025-06-05 07:33:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:33:21] 
[2025-06-05 07:33:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:33:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:33:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:33:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:33:21] 
[2025-06-05 07:33:21] 2025-06-05 05:32:10,752 | INFO     | **************************************
[2025-06-05 07:33:21] 2025-06-05 05:32:11,255 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-05 07:33:21] 2025-06-05 05:32:11,273 | INFO     | sufficient remaining disk space (659735707648 B)
[2025-06-05 07:33:21] 2025-06-05 05:32:11,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:33:21] 2025-06-05 05:32:11,274 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:33:21] 2025-06-05 05:32:11,274 | INFO     | update_server=False
[2025-06-05 07:33:21] 2025-06-05 05:32:11,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:33:21] 2025-06-05 05:32:11,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:33:21] 2025-06-05 05:32:11,445 | INFO     | all payload control threads have been joined
[2025-06-05 07:33:21] 2025-06-05 05:32:11,468 | INFO     | all data control threads have been joined
[2025-06-05 07:33:21] 2025-06-05 05:32:11,747 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:33:21] 2025-06-05 05:32:11,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:33:21] 2025-06-05 05:32:11,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:33:21] 2025-06-05 05:32:12,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:33:21] 2025-06-05 05:32:12,095 | INFO     | aborting loop
[2025-06-05 07:33:21] 2025-06-05 05:32:12,279 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:12,451 | INFO     | [payload] control thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:12,474 | INFO     | [data] control thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:12,812 | INFO     | [job] validate thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:12,896 | INFO     | all job control threads have been joined
[2025-06-05 07:33:21] 2025-06-05 05:32:12,948 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,088 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,100 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,176 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,328 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,378 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,537 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:33:21] 2025-06-05 05:32:13,640 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:13,901 | INFO     | [job] control thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:14,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:33:21] 2025-06-05 05:32:15,167 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:17,622 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:21,544 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:33:21] 2025-06-05 05:32:22,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:33:21] 2025-06-05 05:32:23,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23154156853056)>', '<ExcThread(monitor, started 23153919100672)>']
[2025-06-05 07:33:21] 2025-06-05 05:32:23,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:33:21] 2025-06-05 05:32:23,808 | INFO     | [monitor] control thread has ended
[2025-06-05 07:33:21] 2025-06-05 05:32:28,678 | INFO     | all workflow threads have been joined
[2025-06-05 07:33:21] 2025-06-05 05:32:28,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:33:21] 2025-06-05 05:32:28,679 | INFO     | traces error code: 0
[2025-06-05 07:33:21] 2025-06-05 05:32:28,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:33:21] 2025-06-05 05:32:28,865 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:33:21] 2025-06-05 05:32:28,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:33:21] 2025-06-05 05:32:28,871 [wrapper] pilotpid: 1620791
[2025-06-05 07:33:21] 2025-06-05 05:32:28,874 [wrapper] Pilot exit status: 0
[2025-06-05 07:33:21] 2025-06-05 05:32:28,885 [wrapper] pandaids: 6677517693
[2025-06-05 07:33:21] 2025-06-05 05:32:28,957 [wrapper] cleanup supervisor_pilot 1933549 1620792
[2025-06-05 07:33:21] 2025-06-05 05:32:28,962 [wrapper] Test setup, not cleaning
[2025-06-05 07:33:21] 2025-06-05 05:32:28,965 [wrapper] apfmon messages muted
[2025-06-05 07:33:21] 2025-06-05 05:32:28,968 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:33:21] 2025-06-05 05:32:28,971 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:33:21]  *** Error codes and diagnostics ***
[2025-06-05 07:33:21]     "exeErrorCode": 0,
[2025-06-05 07:33:21]     "exeErrorDiag": "",
[2025-06-05 07:33:21]     "pilotErrorCode": 0,
[2025-06-05 07:33:21]     "pilotErrorDiag": "",
[2025-06-05 07:33:21]  *** Listing of results directory ***
[2025-06-05 07:33:21] total 390168
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc    495897 Jun  3 09:38 pilot3.tar.gz
[2025-06-05 07:33:21] -rwx------ 1 boinc boinc     37140 Jun  3 09:45 runpilot2-wrapper.sh
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc      5111 Jun  3 09:45 queuedata.json
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc       100 Jun  5 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:33:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:36 run_atlas
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc       105 Jun  5 04:36 job.xml
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc      6635 Jun  5 04:36 init_data.xml
[2025-06-05 07:33:21] -rw-r--r-- 2 boinc boinc 213466466 Jun  5 04:36 EVNT.45006593._000981.pool.root.1
[2025-06-05 07:33:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:36 start_atlas.sh
[2025-06-05 07:33:21] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:36 shared
[2025-06-05 07:33:21] -rw-r--r-- 2 boinc boinc    508875 Jun  5 04:36 input.tar.gz
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc         0 Jun  5 04:36 boinc_lockfile
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc      2524 Jun  5 04:36 pandaJob.out
[2025-06-05 07:33:21] -rw------- 1 boinc boinc    987109 Jun  5 04:36 agis_schedconf.cvmfs.json
[2025-06-05 07:33:21] -rw------- 1 boinc boinc   1598969 Jun  5 04:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:33:21] drwx------ 4 boinc boinc      4096 Jun  5 04:36 pilot3
[2025-06-05 07:33:21] -rw------- 1 boinc boinc 179651536 Jun  5 07:31 HITS.45006595._024527.pool.root.1
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc       529 Jun  5 07:31 boinc_task_state.xml
[2025-06-05 07:33:21] -rw------- 1 boinc boinc        95 Jun  5 07:31 pilot_heartbeat.json
[2025-06-05 07:33:21] -rw------- 1 boinc boinc      1035 Jun  5 07:31 memory_monitor_summary.json
[2025-06-05 07:33:21] -rw------- 1 boinc boinc    304369 Jun  5 07:32 log.45006595._024527.job.log.tgz.1
[2025-06-05 07:33:21] -rw------- 1 boinc boinc      7727 Jun  5 07:32 heartbeat.json
[2025-06-05 07:33:21] -rw------- 1 boinc boinc      4435 Jun  5 07:32 pilotlog.txt
[2025-06-05 07:33:21] -rw------- 1 boinc boinc    984389 Jun  5 07:32 log.45006595._024527.job.log.1
[2025-06-05 07:33:21] -rw------- 1 boinc boinc       357 Jun  5 07:32 output.list
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc       620 Jun  5 07:32 runtime_log
[2025-06-05 07:33:21] -rw------- 1 boinc boinc   1310720 Jun  5 07:32 result.tar.gz
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc      9026 Jun  5 07:32 runtime_log.err
[2025-06-05 07:33:21] -rw------- 1 boinc boinc       664 Jun  5 07:32 1hqNDmeVbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZliKDmMiiNYn.diag
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc        27 Jun  5 07:33 wrapper_checkpoint.txt
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc      8192 Jun  5 07:33 boinc_mmap_file
[2025-06-05 07:33:21] -rw-r--r-- 1 boinc boinc     20907 Jun  5 07:33 stderr.txt
[2025-06-05 07:33:21] HITS file was successfully produced:
[2025-06-05 07:33:21] -rw------- 1 boinc boinc 179651536 Jun  5 07:31 shared/HITS.pool.root.1
[2025-06-05 07:33:21]  *** Contents of shared directory: ***
[2025-06-05 07:33:21] total 385712
[2025-06-05 07:33:21] -rw-r--r-- 2 boinc boinc 213466466 Jun  5 04:36 ATLAS.root_0
[2025-06-05 07:33:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:36 start_atlas.sh
[2025-06-05 07:33:21] -rw-r--r-- 2 boinc boinc    508875 Jun  5 04:36 input.tar.gz
[2025-06-05 07:33:21] -rw------- 1 boinc boinc 179651536 Jun  5 07:31 HITS.pool.root.1
[2025-06-05 07:33:21] -rw------- 1 boinc boinc   1310720 Jun  5 07:32 result.tar.gz
07:33:22 (1617100): run_atlas exited; CPU time 39787.731302
07:33:22 (1617100): called boinc_finish(0)

</stderr_txt>
]]>

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