Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:01:37 (450310): wrapper (7.7.26015): starting
09:01:37 (450310): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:01:37] Arguments: --nthreads 12
[2025-06-04 09:01:37] Threads: 12
[2025-06-04 09:01:37] Checking for CVMFS
[2025-06-04 09:01:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:01:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:01:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:01:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:01:40] 2.12.7.0 15468 1362 52636 146773 2 56 3527500 4096000 912 130560 0 1110338 99.977 453396 178 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 09:01:40] CVMFS is ok
[2025-06-04 09:01:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:01:40] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 09:01:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 09:01:40] Further information can be found at the LHC@home message board.
[2025-06-04 09:01:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:01:40] Checking for apptainer binary...
[2025-06-04 09:01:40] apptainer is not installed, using version from CVMFS
[2025-06-04 09:01:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:01:41] gggg3250
[2025-06-04 09:01:41] apptainer works
[2025-06-04 09:01:41] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:01:41] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:01:41] Starting ATLAS job with PandaID=6677495867
[2025-06-04 09:01:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:03:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:03:21] 2025-06-04 12:02:59,759 | INFO     | extracted standard info from prmon json
[2025-06-04 12:03:21] 2025-06-04 12:02:59,759 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:03:21] 2025-06-04 12:02:59,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:03:21] 2025-06-04 12:02:59,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:03:21] 2025-06-04 12:02:59,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:03:21] 2025-06-04 12:02:59,761 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:03:21] 2025-06-04 12:02:59,761 | INFO     | sum of square deviations: 1633472487.5
[2025-06-04 12:03:21] 2025-06-04 12:02:59,762 | INFO     | sum of deviations: 45945922941.5
[2025-06-04 12:03:21] 2025-06-04 12:02:59,762 | INFO     | mean x: 1749033211.5
[2025-06-04 12:03:21] 2025-06-04 12:02:59,762 | INFO     | mean y: 2599625.7183908047
[2025-06-04 12:03:21] 2025-06-04 12:02:59,762 | INFO     | -- intersect: -49193787685.76565
[2025-06-04 12:03:21] 2025-06-04 12:02:59,762 | INFO     | intersect: -49193787685.76565
[2025-06-04 12:03:21] 2025-06-04 12:02:59,762 | INFO     | chi2: 3.2823698812232487
[2025-06-04 12:03:21] 2025-06-04 12:02:59,762 | INFO     | sum of square deviations: 1496660620.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | sum of deviations: 55892084114.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | mean x: 1749033059.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | mean y: 2610406.2958579883
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | -- intersect: -65314203269.06811
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | intersect: -65314203269.06811
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | chi2: 2.5882943430955856
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | current chi2=2.5882943430955856 (change=21.145561385330538 %)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | right removable region: 168
[2025-06-04 12:03:21] 2025-06-04 12:02:59,767 | INFO     | sum of square deviations: 1496660620.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,768 | INFO     | sum of deviations: 2101271818.9999962
[2025-06-04 12:03:21] 2025-06-04 12:02:59,768 | INFO     | mean x: 1749033364.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,768 | INFO     | mean y: 2648168.49704142
[2025-06-04 12:03:21] 2025-06-04 12:02:59,768 | INFO     | -- intersect: -2452948290.1469784
[2025-06-04 12:03:21] 2025-06-04 12:02:59,768 | INFO     | intersect: -2452948290.1469784
[2025-06-04 12:03:21] 2025-06-04 12:02:59,768 | INFO     | chi2: 0.8196792202472137
[2025-06-04 12:03:21] 2025-06-04 12:02:59,768 | INFO     | current chi2=0.8196792202472137 (change=75.02782288686667 %)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | sum of square deviations: 1367709365.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | sum of deviations: -5298755606.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | mean x: 1749033516.5
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | mean y: 2656844.8170731706
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | -- intersect: 6778731782.8111315
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | intersect: 6778731782.8111315
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | chi2: 0.7493704223263112
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | current chi2=0.7493704223263112 (change=8.577599161254508 %)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,769 | INFO     | left removable region: 20
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | sum of square deviations: 1005179777.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | sum of deviations: 3041904568.0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | mean x: 1749033638.5
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | mean y: 2673272.5135135134
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | -- intersect: -5290303701.633082
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | intersect: -5290303701.633082
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | chi2: 0.0019361755734745689
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | -- intersect: -5290303701.633082
[2025-06-04 12:03:21] 2025-06-04 12:02:59,770 | INFO     | current memory leak: 3.03 B/s (using 148 data points, chi2=0.00)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | ..............................
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . Timing measurements:
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . get job = 0 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . initial setup = 17 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . payload setup = 47 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . stage-in = 0 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . payload execution = 10623 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . stage-out = 1 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | . log creation = 0 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,775 | INFO     | ..............................
[2025-06-04 12:03:21] 2025-06-04 12:02:59,839 | INFO     | sufficient remaining disk space (92956262400 B)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,839 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,840 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6677495867: 4212878 B (within 2537553920 B limit)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,840 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6677495867/HITS.45006595._023012.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,840 | INFO     | total size of present files: 0 B (workdir size: 4212878 B)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,840 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6677495867/HITS.45006595._023012.pool.root.1 since it does n
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | 
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | job summary report
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | --------------------------------------------------
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | PanDA job id: 6677495867
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | task id: 45006595
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | errors: (none)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | pilot state: finished 
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | transexitcode: 0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | exeerrorcode: 0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | exeerrordiag: 
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | exitcode: 0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | exitmsg: OK
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | cpuconsumptiontime: 21283 s
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | nevents: 400
[2025-06-04 12:03:21] 2025-06-04 12:02:59,910 | INFO     | neventsw: 0
[2025-06-04 12:03:21] 2025-06-04 12:02:59,914 | INFO     | pid: 460341
[2025-06-04 12:03:21] 2025-06-04 12:02:59,915 | INFO     | pgrp: 460341
[2025-06-04 12:03:21] 2025-06-04 12:02:59,915 | INFO     | corecount: 12
[2025-06-04 12:03:21] 2025-06-04 12:02:59,915 | INFO     | event service: False
[2025-06-04 12:03:21] 2025-06-04 12:02:59,915 | INFO     | sizes: {0: 2405205, 1: 2405205, 12: 2405233, 22: 2405261, 33: 2405289, 34: 2405551, 44: 2405707, 10674: 2434421, 10676: 2443408, 10678: 2443464, 10717: 2443662}
[2025-06-04 12:03:21] 2025-06-04 12:02:59,915 | INFO     | --------------------------------------------------
[2025-06-04 12:03:21] 2025-06-04 12:02:59,915 | INFO     | 
[2025-06-04 12:03:21] 2025-06-04 12:02:59,915 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-04 12:03:21] 2025-06-04 12:02:59,942 | INFO     | number of running child processes to parent process 460341: 1
[2025-06-04 12:03:21] 2025-06-04 12:02:59,942 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:03:21] 2025-06-04 12:02:59,942 | INFO     | aborting job monitoring since job object (job id=6677495867) has expired
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:03:21] 2025-06-04 12:02:59,956 | INFO     | job 6677495867 has completed (purged errors)
[2025-06-04 12:03:21] 2025-06-04 12:02:59,956 | INFO     | overall cleanup function is called
[2025-06-04 12:03:21] 2025-06-04 12:03:00,958 | INFO     | --- collectZombieJob: --- 10, [460341]
[2025-06-04 12:03:21] 2025-06-04 12:03:00,959 | INFO     | zombie collector waiting for pid 460341
[2025-06-04 12:03:21] 2025-06-04 12:03:00,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:03:21] 2025-06-04 12:03:00,959 | INFO     | collected zombie processes
[2025-06-04 12:03:21] 2025-06-04 12:03:00,959 | INFO     | will attempt to kill all subprocesses of pid=460341
[2025-06-04 12:03:21] 2025-06-04 12:03:01,067 | INFO     | process IDs to be killed: [460341] (in reverse order)
[2025-06-04 12:03:21] 2025-06-04 12:03:01,296 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:03:21] 2025-06-04 12:03:01,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:03:21] 2025-06-04 12:03:01,297 | INFO     | did not find any defunct processes belonging to 460341
[2025-06-04 12:03:21] 2025-06-04 12:03:01,298 | INFO     | did not find any defunct processes belonging to 460341
[2025-06-04 12:03:21] 2025-06-04 12:03:01,298 | INFO     | ready for new job
[2025-06-04 12:03:21] 2025-06-04 12:03:01,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:03:21] 2025-06-04 12:03:01,307 | INFO     | **************************************
[2025-06-04 12:03:21] 2025-06-04 12:03:01,307 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:03:21] 2025-06-04 12:03:01,307 | INFO     | **************************************
[2025-06-04 12:03:21] 2025-06-04 12:03:01,307 | INFO     | 
[2025-06-04 12:03:21] 2025-06-04 12:03:01,327 | INFO     | architecture information:
[2025-06-04 12:03:21] 2025-06-04 12:03:01,327 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:03:21] 2025-06-04 12:03:01,395 | INFO     | cat /etc/os-release:
[2025-06-04 12:03:21] NAME="CentOS Linux"
[2025-06-04 12:03:21] VERSION="7 (Core)"
[2025-06-04 12:03:21] ID="centos"
[2025-06-04 12:03:21] ID_LIKE="rhel fedora"
[2025-06-04 12:03:21] VERSION_ID="7"
[2025-06-04 12:03:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:03:21] ANSI_COLOR="0;31"
[2025-06-04 12:03:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:03:21] HOME_URL="https://www.centos.org/"
[2025-06-04 12:03:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:03:21] 
[2025-06-04 12:03:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:03:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:03:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:03:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:03:21] 
[2025-06-04 12:03:21] 2025-06-04 12:03:01,395 | INFO     | **************************************
[2025-06-04 12:03:21] 2025-06-04 12:03:01,898 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-04 12:03:21] 2025-06-04 12:03:01,943 | INFO     | sufficient remaining disk space (92961505280 B)
[2025-06-04 12:03:21] 2025-06-04 12:03:01,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:03:21] 2025-06-04 12:03:01,943 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:03:21] 2025-06-04 12:03:01,943 | INFO     | update_server=False
[2025-06-04 12:03:21] 2025-06-04 12:03:01,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:03:21] 2025-06-04 12:03:01,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:03:21] 2025-06-04 12:03:01,945 | INFO     | aborting loop
[2025-06-04 12:03:21] 2025-06-04 12:03:01,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:03:21] 2025-06-04 12:03:02,266 | INFO     | all payload control threads have been joined
[2025-06-04 12:03:21] 2025-06-04 12:03:02,286 | INFO     | all data control threads have been joined
[2025-06-04 12:03:21] 2025-06-04 12:03:02,302 | INFO     | all job control threads have been joined
[2025-06-04 12:03:21] 2025-06-04 12:03:02,463 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:03:21] 2025-06-04 12:03:02,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:03:21] 2025-06-04 12:03:02,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:03:21] 2025-06-04 12:03:02,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:03:21] 2025-06-04 12:03:02,951 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:02,951 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,135 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,211 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,271 | INFO     | [payload] control thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,291 | INFO     | [data] control thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,307 | INFO     | [job] control thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,327 | INFO     | [job] validate thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,579 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,619 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:03,987 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:04,267 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:04,278 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:04,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:03:21] 2025-06-04 12:03:05,935 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:06,730 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:12,730 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:03:21] 2025-06-04 12:03:13,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:03:21] 2025-06-04 12:03:15,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051907577664)>', '<ExcThread(monitor, started 140051451188992)>']
[2025-06-04 12:03:21] 2025-06-04 12:03:16,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:03:21] 2025-06-04 12:03:16,519 | INFO     | [monitor] control thread has ended
[2025-06-04 12:03:21] 2025-06-04 12:03:20,762 | INFO     | all workflow threads have been joined
[2025-06-04 12:03:21] 2025-06-04 12:03:20,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:03:21] 2025-06-04 12:03:20,763 | INFO     | traces error code: 0
[2025-06-04 12:03:21] 2025-06-04 12:03:20,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:03:21] 2025-06-04 12:03:21,048 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:03:21] 2025-06-04 12:03:21,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:03:21] 2025-06-04 12:03:21,088 [wrapper] pilotpid: 453913
[2025-06-04 12:03:21] 2025-06-04 12:03:21,115 [wrapper] Pilot exit status: 0
[2025-06-04 12:03:21] 2025-06-04 12:03:21,220 [wrapper] pandaids: 6677495867
[2025-06-04 12:03:21] 2025-06-04 12:03:21,267 [wrapper] cleanup supervisor_pilot  512570 453914
[2025-06-04 12:03:21] 2025-06-04 12:03:21,279 [wrapper] Test setup, not cleaning
[2025-06-04 12:03:21] 2025-06-04 12:03:21,295 [wrapper] apfmon messages muted
[2025-06-04 12:03:21] 2025-06-04 12:03:21,308 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:03:21] 2025-06-04 12:03:21,335 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:03:21]  *** Error codes and diagnostics ***
[2025-06-04 12:03:21]     "exeErrorCode": 0,
[2025-06-04 12:03:21]     "exeErrorDiag": "",
[2025-06-04 12:03:21]     "pilotErrorCode": 0,
[2025-06-04 12:03:21]     "pilotErrorDiag": "",
[2025-06-04 12:03:21]  *** Listing of results directory ***
[2025-06-04 12:03:21] total 393240
[2025-06-04 12:03:21] -rwx------ 1 boinc boinc     37140 Jun  3 06:55 runpilot2-wrapper.sh
[2025-06-04 12:03:21] -rw-r--r-- 1 boinc boinc      5111 Jun  3 06:55 queuedata.json
[2025-06-04 12:03:21] -rw-r--r-- 1 boinc boinc    495897 Jun  3 06:55 pilot3.tar.gz
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc       100 Jun  4 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:03:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:01 run_atlas
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc       105 Jun  4 09:01 job.xml
[2025-06-04 12:03:21] -rw-r--r-- 2 boinc boinc 217638421 Jun  4 09:01 EVNT.45006593._000921.pool.root.1
[2025-06-04 12:03:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:01 start_atlas.sh
[2025-06-04 12:03:21] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:01 shared
[2025-06-04 12:03:21] -rw-r--r-- 2 boinc boinc    508877 Jun  4 09:01 input.tar.gz
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc         0 Jun  4 09:01 boinc_lockfile
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc      2524 Jun  4 09:01 pandaJob.out
[2025-06-04 12:03:21] -rw------- 1 boinc boinc    986774 Jun  4 09:03 agis_schedconf.cvmfs.json
[2025-06-04 12:03:21] -rw------- 1 boinc boinc   1603667 Jun  4 09:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:03:21] drwx------ 4 boinc boinc      4096 Jun  4 09:03 pilot3
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc      9374 Jun  4 10:32 init_data.xml
[2025-06-04 12:03:21] -rw------- 1 boinc boinc 178341214 Jun  4 12:01 HITS.45006595._023012.pool.root.1
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc       530 Jun  4 12:01 boinc_task_state.xml
[2025-06-04 12:03:21] -rw------- 1 boinc boinc      1032 Jun  4 12:02 memory_monitor_summary.json
[2025-06-04 12:03:21] -rw------- 1 boinc boinc    408541 Jun  4 12:02 log.45006595._023012.job.log.tgz.1
[2025-06-04 12:03:21] -rw------- 1 boinc boinc        95 Jun  4 12:02 pilot_heartbeat.json
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc      8192 Jun  4 12:02 boinc_mmap_file
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc        28 Jun  4 12:02 wrapper_checkpoint.txt
[2025-06-04 12:03:21] -rw------- 1 boinc boinc      7675 Jun  4 12:02 heartbeat.json
[2025-06-04 12:03:21] -rw------- 1 boinc boinc      4448 Jun  4 12:03 pilotlog.txt
[2025-06-04 12:03:21] -rw------- 1 boinc boinc   1020317 Jun  4 12:03 log.45006595._023012.job.log.1
[2025-06-04 12:03:21] -rw------- 1 boinc boinc       357 Jun  4 12:03 output.list
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc       620 Jun  4 12:03 runtime_log
[2025-06-04 12:03:21] -rw------- 1 boinc boinc   1443840 Jun  4 12:03 result.tar.gz
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc      8972 Jun  4 12:03 runtime_log.err
[2025-06-04 12:03:21] -rw------- 1 boinc boinc       654 Jun  4 12:03 MatNDmbjag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhgXKDmuwBH2n.diag
[2025-06-04 12:03:21] -rw-rw-r-- 1 boinc boinc     21437 Jun  4 12:03 stderr.txt
[2025-06-04 12:03:21] HITS file was successfully produced:
[2025-06-04 12:03:21] -rw------- 1 boinc boinc 178341214 Jun  4 12:01 shared/HITS.pool.root.1
[2025-06-04 12:03:21]  *** Contents of shared directory: ***
[2025-06-04 12:03:21] total 388640
[2025-06-04 12:03:21] -rw-r--r-- 2 boinc boinc 217638421 Jun  4 09:01 ATLAS.root_0
[2025-06-04 12:03:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:01 start_atlas.sh
[2025-06-04 12:03:21] -rw-r--r-- 2 boinc boinc    508877 Jun  4 09:01 input.tar.gz
[2025-06-04 12:03:21] -rw------- 1 boinc boinc 178341214 Jun  4 12:01 HITS.pool.root.1
[2025-06-04 12:03:21] -rw------- 1 boinc boinc   1443840 Jun  4 12:03 result.tar.gz
12:03:23 (450310): run_atlas exited; CPU time 21322.681606
12:03:23 (450310): called boinc_finish(0)

</stderr_txt>
]]>

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