Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:21:33 (13035): wrapper (7.7.26015): starting
21:21:33 (13035): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:21:33] Arguments: --nthreads 8
[2025-06-03 21:21:33] Threads: 8
[2025-06-03 21:21:33] Checking for CVMFS
[2025-06-03 21:21:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:21:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:21:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:21:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:21:34] 2.11.2.0 25379 32293 99956 146750 0 215 18369048 25165824 4397 130560 0 16892786 99.845 18168477 2595 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 21:21:34] CVMFS is ok
[2025-06-03 21:21:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:21:34] Checking for apptainer binary...
[2025-06-03 21:21:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:21:34] Running /usr/bin/apptainer --version
[2025-06-03 21:21:34] apptainer version 1.3.2-1.el7
[2025-06-03 21:21:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:21:36] cg-vwn336.simple-grid.lan
[2025-06-03 21:21:36] apptainer works
[2025-06-03 21:21:36] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:21:36] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:21:36] Starting ATLAS job with PandaID=6677516702
[2025-06-03 21:21:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:03:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:03:28] 2025-06-03 23:00:16,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:03:28] 2025-06-03 23:00:16,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:03:28] 2025-06-03 23:00:16,441 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:03:28] 2025-06-03 23:00:16,442 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,443 | INFO     | sum of deviations: -2702122490.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,443 | INFO     | mean x: 1748985043.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,443 | INFO     | mean y: 2477625.539906103
[2025-06-04 02:03:28] 2025-06-03 23:00:16,448 | INFO     | -- intersect: 1579665632.2669837
[2025-06-04 02:03:28] 2025-06-03 23:00:16,448 | INFO     | intersect: 1579665632.2669837
[2025-06-04 02:03:28] 2025-06-03 23:00:16,448 | INFO     | chi2: 2.4770153254222915
[2025-06-04 02:03:28] 2025-06-03 23:00:16,449 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,450 | INFO     | sum of deviations: 11104810575.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,451 | INFO     | mean x: 1748984890.5
[2025-06-04 02:03:28] 2025-06-03 23:00:16,451 | INFO     | mean y: 2487645.25
[2025-06-04 02:03:28] 2025-06-03 23:00:16,451 | INFO     | -- intersect: -6957986456.459549
[2025-06-04 02:03:28] 2025-06-03 23:00:16,451 | INFO     | intersect: -6957986456.459549
[2025-06-04 02:03:28] 2025-06-03 23:00:16,451 | INFO     | chi2: 1.7130064242793488
[2025-06-04 02:03:28] 2025-06-03 23:00:16,451 | INFO     | current chi2=1.7130064242793488 (change=30.84393113363929 %)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,452 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,453 | INFO     | sum of deviations: 10799204845.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,453 | INFO     | mean x: 1748984738.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,453 | INFO     | mean y: 2487407.950738916
[2025-06-04 02:03:28] 2025-06-03 23:00:16,454 | INFO     | -- intersect: -7279028458.352971
[2025-06-04 02:03:28] 2025-06-03 23:00:16,454 | INFO     | intersect: -7279028458.352971
[2025-06-04 02:03:28] 2025-06-03 23:00:16,454 | INFO     | chi2: 1.7138086411927065
[2025-06-04 02:03:28] 2025-06-03 23:00:16,454 | INFO     | current chi2=1.7138086411927065 (change=-0.04683093431451532 %)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,454 | INFO     | right removable region: 202
[2025-06-04 02:03:28] 2025-06-03 23:00:16,455 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,456 | INFO     | sum of deviations: -37464036818.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,456 | INFO     | mean x: 1748985195.5
[2025-06-04 02:03:28] 2025-06-03 23:00:16,456 | INFO     | mean y: 2503103.8076923075
[2025-06-04 02:03:28] 2025-06-03 23:00:16,457 | INFO     | -- intersect: 23484894066.753292
[2025-06-04 02:03:28] 2025-06-03 23:00:16,457 | INFO     | intersect: 23484894066.753292
[2025-06-04 02:03:28] 2025-06-03 23:00:16,457 | INFO     | chi2: 0.9457981199431317
[2025-06-04 02:03:28] 2025-06-03 23:00:16,457 | INFO     | current chi2=0.9457981199431317 (change=61.81702590871583 %)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,458 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,459 | INFO     | sum of deviations: -34778362185.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,459 | INFO     | mean x: 1748985348.0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,459 | INFO     | mean y: 2500976.4236453203
[2025-06-04 02:03:28] 2025-06-03 23:00:16,459 | INFO     | -- intersect: 23452309366.21195
[2025-06-04 02:03:28] 2025-06-03 23:00:16,459 | INFO     | intersect: 23452309366.21195
[2025-06-04 02:03:28] 2025-06-03 23:00:16,460 | INFO     | chi2: 0.9306331457970284
[2025-06-04 02:03:28] 2025-06-03 23:00:16,460 | INFO     | current chi2=0.9306331457970284 (change=1.6034049789626483 %)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,460 | INFO     | left removable region: 20
[2025-06-04 02:03:28] 2025-06-03 23:00:16,460 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 02:03:28] 2025-06-03 23:00:16,462 | INFO     | sum of deviations: -6736762499.499996
[2025-06-04 02:03:28] 2025-06-03 23:00:16,462 | INFO     | mean x: 1748985317.5
[2025-06-04 02:03:28] 2025-06-03 23:00:16,462 | INFO     | mean y: 2499764.2802197803
[2025-06-04 02:03:28] 2025-06-03 23:00:16,462 | INFO     | -- intersect: 6305653849.805013
[2025-06-04 02:03:28] 2025-06-03 23:00:16,462 | INFO     | intersect: 6305653849.805013
[2025-06-04 02:03:28] 2025-06-03 23:00:16,462 | INFO     | chi2: 0.08018516468244291
[2025-06-04 02:03:28] 2025-06-03 23:00:16,463 | INFO     | -- intersect: 6305653849.805013
[2025-06-04 02:03:28] 2025-06-03 23:00:16,463 | INFO     | current memory leak: -3.60 B/s (using 182 data points, chi2=0.08)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | ..............................
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . Timing measurements:
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . get job = 0 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . initial setup = 2 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . payload setup = 14 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . stage-in = 0 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . payload execution = 12962 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . stage-out = 3 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | . log creation = 1 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,464 | INFO     | ..............................
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | 
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | job summary report
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | --------------------------------------------------
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | PanDA job id: 6677516702
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | task id: 45006595
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | errors: (none)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:03:28] 2025-06-03 23:00:16,608 | INFO     | pilot state: finished 
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | transexitcode: 0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | exeerrorcode: 0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | exeerrordiag: 
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | exitcode: 0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | exitmsg: OK
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | cpuconsumptiontime: 49225 s
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | nevents: 400
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | neventsw: 0
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | pid: 25270
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | pgrp: 25270
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | corecount: 8
[2025-06-04 02:03:28] 2025-06-03 23:00:16,609 | INFO     | event service: False
[2025-06-04 02:03:28] 2025-06-03 23:00:16,610 | INFO     | sizes: {0: 2405011, 1: 2405210, 8: 2405416, 12: 2405444, 12981: 2434746, 12985: 2443687, 12986: 2443871, 13077: 2444041}
[2025-06-04 02:03:28] 2025-06-03 23:00:16,610 | INFO     | --------------------------------------------------
[2025-06-04 02:03:28] 2025-06-03 23:00:16,610 | INFO     | 
[2025-06-04 02:03:28] 2025-06-03 23:00:16,610 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 02:03:28] 2025-06-03 23:00:16,992 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:03:28] 2025-06-03 23:00:16,994 | INFO     | job 6677516702 has completed (purged errors)
[2025-06-04 02:03:28] 2025-06-03 23:00:16,995 | INFO     | overall cleanup function is called
[2025-06-04 02:03:28] 2025-06-03 23:00:18,004 | INFO     | --- collectZombieJob: --- 10, [25270]
[2025-06-04 02:03:28] 2025-06-03 23:00:18,004 | INFO     | zombie collector waiting for pid 25270
[2025-06-04 02:03:28] 2025-06-03 23:00:18,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:03:28] 2025-06-03 23:00:18,004 | INFO     | collected zombie processes
[2025-06-04 02:03:28] 2025-06-03 23:00:18,004 | INFO     | will attempt to kill all subprocesses of pid=25270
[2025-06-04 02:03:28] 2025-06-03 23:00:18,101 | INFO     | process IDs to be killed: [25270] (in reverse order)
[2025-06-04 02:03:28] 2025-06-03 23:00:18,972 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:03:28] 2025-06-03 23:00:18,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:03:28] 2025-06-03 23:00:18,976 | INFO     | did not find any defunct processes belonging to 25270
[2025-06-04 02:03:28] 2025-06-03 23:00:18,979 | INFO     | did not find any defunct processes belonging to 25270
[2025-06-04 02:03:28] 2025-06-03 23:00:18,979 | INFO     | ready for new job
[2025-06-04 02:03:28] 2025-06-03 23:00:18,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:03:28] 2025-06-03 23:00:18,981 | INFO     | **************************************
[2025-06-04 02:03:28] 2025-06-03 23:00:18,981 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:03:28] 2025-06-03 23:00:18,982 | INFO     | **************************************
[2025-06-04 02:03:28] 2025-06-03 23:00:18,982 | INFO     | 
[2025-06-04 02:03:28] 2025-06-03 23:00:18,982 | INFO     | pilot is running in a VM
[2025-06-04 02:03:28] 2025-06-03 23:00:18,982 | INFO     | architecture information:
[2025-06-04 02:03:28] 2025-06-03 23:00:18,983 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:03:28] 2025-06-03 23:00:19,200 | INFO     | cat /etc/os-release:
[2025-06-04 02:03:28] NAME="CentOS Linux"
[2025-06-04 02:03:28] VERSION="7 (Core)"
[2025-06-04 02:03:28] ID="centos"
[2025-06-04 02:03:28] ID_LIKE="rhel fedora"
[2025-06-04 02:03:28] VERSION_ID="7"
[2025-06-04 02:03:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:03:28] ANSI_COLOR="0;31"
[2025-06-04 02:03:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:03:28] HOME_URL="https://www.centos.org/"
[2025-06-04 02:03:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:03:28] 
[2025-06-04 02:03:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:03:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:03:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:03:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:03:28] 
[2025-06-04 02:03:28] 2025-06-03 23:00:19,201 | INFO     | **************************************
[2025-06-04 02:03:28] 2025-06-03 23:00:19,710 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 02:03:28] 2025-06-03 23:00:19,847 | INFO     | PID=16736 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 02:03:28] 2025-06-03 23:00:19,847 | INFO     | .. there are 9 such processes running
[2025-06-04 02:03:28] 2025-06-03 23:00:19,967 | INFO     | sufficient remaining disk space (496885563392 B)
[2025-06-04 02:03:28] 2025-06-03 23:00:19,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:03:28] 2025-06-03 23:00:19,968 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:03:28] 2025-06-03 23:00:19,968 | INFO     | update_server=False
[2025-06-04 02:03:28] 2025-06-03 23:00:19,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:03:28] 2025-06-03 23:00:19,969 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:03:28] 2025-06-03 23:00:19,969 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:03:28] 2025-06-03 23:00:19,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:03:28] 2025-06-03 23:00:19,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:03:28] 2025-06-03 23:00:19,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:03:28] 2025-06-03 23:00:19,972 | INFO     | aborting loop
[2025-06-04 02:03:28] 2025-06-03 23:00:19,991 | INFO     | all data control threads have been joined
[2025-06-04 02:03:28] 2025-06-03 23:00:20,566 | INFO     | all job control threads have been joined
[2025-06-04 02:03:28] 2025-06-03 23:00:20,974 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:20,978 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:20,996 | INFO     | [data] control thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:21,016 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:21,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:03:28] 2025-06-03 23:00:21,131 | INFO     | all payload control threads have been joined
[2025-06-04 02:03:28] 2025-06-03 23:00:21,264 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:21,551 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:21,571 | INFO     | [job] control thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:21,581 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:21,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:03:28] 2025-06-03 23:00:21,651 | INFO     | [job] validate thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:21,837 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:22,014 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:22,137 | INFO     | [payload] control thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:22,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:03:28] 2025-06-03 23:00:22,628 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:23,126 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:26,314 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:30,189 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:03:28] 2025-06-03 23:00:31,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:03:28] 2025-06-03 23:00:31,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850595563328)>', '<ExcThread(monitor, started 139850166560512)>']
[2025-06-04 02:03:28] 2025-06-03 23:00:32,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:03:28] 2025-06-03 23:00:32,041 | INFO     | [monitor] control thread has ended
[2025-06-04 02:03:28] 2025-06-03 23:00:36,928 | INFO     | all workflow threads have been joined
[2025-06-04 02:03:28] 2025-06-03 23:00:36,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:03:28] 2025-06-03 23:00:36,928 | INFO     | traces error code: 0
[2025-06-04 02:03:28] 2025-06-03 23:00:36,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:03:28] 2025-06-03 23:00:37,267 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:03:28] 2025-06-03 23:00:37,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:03:28] 2025-06-03 23:00:37,467 [wrapper] pilotpid: 16736
[2025-06-04 02:03:28] 2025-06-03 23:00:37,585 [wrapper] Pilot exit status: 0
[2025-06-04 02:03:28] 2025-06-03 23:00:37,915 [wrapper] pandaids: 6677516702
[2025-06-04 02:03:28] 2025-06-03 23:00:38,672 [wrapper] cleanup supervisor_pilot  9085 16737
[2025-06-04 02:03:28] 2025-06-03 23:00:38,824 [wrapper] Test setup, not cleaning
[2025-06-04 02:03:28] 2025-06-03 23:00:38,882 [wrapper] apfmon messages muted
[2025-06-04 02:03:28] 2025-06-03 23:00:38,974 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:03:28] 2025-06-03 23:00:39,092 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:03:28]  *** Error codes and diagnostics ***
[2025-06-04 02:03:28]     "exeErrorCode": 0,
[2025-06-04 02:03:28]     "exeErrorDiag": "",
[2025-06-04 02:03:28]     "pilotErrorCode": 0,
[2025-06-04 02:03:28]     "pilotErrorDiag": "",
[2025-06-04 02:03:28]  *** Listing of results directory ***
[2025-06-04 02:03:28] total 391096
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 09:38 pilot3.tar.gz
[2025-06-04 02:03:28] -rwx------. 1 boinc boinc     37140 Jun  3 09:40 runpilot2-wrapper.sh
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 09:40 queuedata.json
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:03:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:21 run_atlas
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:21 job.xml
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc      6391 Jun  3 21:21 init_data.xml
[2025-06-04 02:03:28] -rw-r--r--. 2 boinc boinc 213587240 Jun  3 21:21 EVNT.45006593._000969.pool.root.1
[2025-06-04 02:03:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:21 start_atlas.sh
[2025-06-04 02:03:28] drwxrwx--x. 2 boinc boinc        68 Jun  3 21:21 shared
[2025-06-04 02:03:28] -rw-r--r--. 2 boinc boinc    508876 Jun  3 21:21 input.tar.gz
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:21 boinc_lockfile
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc      2524 Jun  3 21:21 pandaJob.out
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc    985078 Jun  3 21:21 agis_schedconf.cvmfs.json
[2025-06-04 02:03:28] drwx------. 4 boinc boinc      4096 Jun  3 21:21 pilot3
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc 180060966 Jun  4 00:57 HITS.45006595._024217.pool.root.1
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc       531 Jun  4 00:57 boinc_task_state.xml
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc      1017 Jun  4 00:58 memory_monitor_summary.json
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc   1603667 Jun  4 00:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc    367994 Jun  4 00:58 log.45006595._024217.job.log.tgz.1
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc        95 Jun  4 01:00 pilot_heartbeat.json
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc      7684 Jun  4 01:00 heartbeat.json
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc      5003 Jun  4 01:00 pilotlog.txt
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc   1135163 Jun  4 01:00 log.45006595._024217.job.log.1
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc       357 Jun  4 01:00 output.list
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc       620 Jun  4 01:00 runtime_log
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc   1525760 Jun  4 01:00 result.tar.gz
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc       657 Jun  4 01:00 gUELDmgRbg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtpXKDmtIHHsm.diag
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc      8659 Jun  4 01:00 runtime_log.err
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc      8192 Jun  4 02:03 boinc_mmap_file
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc        28 Jun  4 02:03 wrapper_checkpoint.txt
[2025-06-04 02:03:28] -rw-r--r--. 1 boinc boinc     20560 Jun  4 02:03 stderr.txt
[2025-06-04 02:03:28] HITS file was successfully produced:
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc 180060966 Jun  4 00:57 shared/HITS.pool.root.1
[2025-06-04 02:03:28]  *** Contents of shared directory: ***
[2025-06-04 02:03:28] total 386436
[2025-06-04 02:03:28] -rw-r--r--. 2 boinc boinc 213587240 Jun  3 21:21 ATLAS.root_0
[2025-06-04 02:03:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:21 start_atlas.sh
[2025-06-04 02:03:28] -rw-r--r--. 2 boinc boinc    508876 Jun  3 21:21 input.tar.gz
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc 180060966 Jun  4 00:57 HITS.pool.root.1
[2025-06-04 02:03:28] -rw-------. 1 boinc boinc   1525760 Jun  4 01:00 result.tar.gz
02:03:30 (13035): run_atlas exited; CPU time 49395.133109
02:03:30 (13035): called boinc_finish(0)

</stderr_txt>
]]>

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