Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:13:33 (7603): wrapper (7.7.26015): starting
22:13:33 (7603): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 22:13:33] Arguments: --nthreads 8
[2025-06-03 22:13:33] Threads: 8
[2025-06-03 22:13:33] Checking for CVMFS
[2025-06-03 22:13:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:13:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:13:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:13:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:13:35] 2.11.2.0 2201 32221 91000 146754 0 114 21315107 25165825 3216 130560 0 16133619 99.791 18678868 2195 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 22:13:35] CVMFS is ok
[2025-06-03 22:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:13:35] Checking for apptainer binary...
[2025-06-03 22:13:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:13:35] Running /usr/bin/apptainer --version
[2025-06-03 22:13:35] apptainer version 1.3.2-1.el7
[2025-06-03 22:13:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:13:36] cg-vwn381.simple-grid.lan
[2025-06-03 22:13:36] apptainer works
[2025-06-03 22:13:36] Set ATHENA_PROC_NUMBER=8
[2025-06-03 22:13:36] Set ATHENA_CORE_NUMBER=8
[2025-06-03 22:13:36] Starting ATLAS job with PandaID=6677516410
[2025-06-03 22:13:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:57:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:57:48] 2025-06-03 23:57:05,243 | INFO     | mean x: 1748988481.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,243 | INFO     | mean y: 2493795.3896713615
[2025-06-04 01:57:48] 2025-06-03 23:57:05,243 | INFO     | -- intersect: -4293896649.8369246
[2025-06-04 01:57:48] 2025-06-03 23:57:05,243 | INFO     | intersect: -4293896649.8369246
[2025-06-04 01:57:48] 2025-06-03 23:57:05,244 | INFO     | chi2: 0.01832842015194041
[2025-06-04 01:57:48] 2025-06-03 23:57:05,244 | INFO     | current chi2=0.01832842015194041 (change=98.934509563768 %)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,244 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,246 | INFO     | sum of deviations: 8201854308.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,247 | INFO     | mean x: 1748988633.5
[2025-06-04 01:57:48] 2025-06-03 23:57:05,247 | INFO     | mean y: 2493184.769230769
[2025-06-04 01:57:48] 2025-06-03 23:57:05,247 | INFO     | -- intersect: -5138424464.109647
[2025-06-04 01:57:48] 2025-06-03 23:57:05,247 | INFO     | intersect: -5138424464.109647
[2025-06-04 01:57:48] 2025-06-03 23:57:05,247 | INFO     | chi2: 0.001946206411620886
[2025-06-04 01:57:48] 2025-06-03 23:57:05,247 | INFO     | current chi2=0.001946206411620886 (change=89.38148298932987 %)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,248 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,249 | INFO     | sum of deviations: 6527660995.999999
[2025-06-04 01:57:48] 2025-06-03 23:57:05,250 | INFO     | mean x: 1748988786.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,250 | INFO     | mean y: 2494483.5172413792
[2025-06-04 01:57:48] 2025-06-03 23:57:05,250 | INFO     | -- intersect: -4398883007.221468
[2025-06-04 01:57:48] 2025-06-03 23:57:05,250 | INFO     | intersect: -4398883007.221468
[2025-06-04 01:57:48] 2025-06-03 23:57:05,250 | INFO     | chi2: 0.0008642460013272552
[2025-06-04 01:57:48] 2025-06-03 23:57:05,250 | INFO     | current chi2=0.0008642460013272552 (change=55.5933021201244 %)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,251 | INFO     | sum of square deviations: 2406926989.5
[2025-06-04 01:57:48] 2025-06-03 23:57:05,252 | INFO     | sum of deviations: 5358627838.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,252 | INFO     | mean x: 1748988938.5
[2025-06-04 01:57:48] 2025-06-03 23:57:05,253 | INFO     | mean y: 2495434.7474747472
[2025-06-04 01:57:48] 2025-06-03 23:57:05,253 | INFO     | -- intersect: -3891341335.1609836
[2025-06-04 01:57:48] 2025-06-03 23:57:05,253 | INFO     | intersect: -3891341335.1609836
[2025-06-04 01:57:48] 2025-06-03 23:57:05,253 | INFO     | chi2: 0.0003733856399532665
[2025-06-04 01:57:48] 2025-06-03 23:57:05,253 | INFO     | current chi2=0.0003733856399532665 (change=56.796370549606934 %)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,254 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,255 | INFO     | sum of deviations: 4548153839.000001
[2025-06-04 01:57:48] 2025-06-03 23:57:05,255 | INFO     | mean x: 1748989091.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,255 | INFO     | mean y: 2496128.725388601
[2025-06-04 01:57:48] 2025-06-03 23:57:05,255 | INFO     | -- intersect: -3565986238.129386
[2025-06-04 01:57:48] 2025-06-03 23:57:05,255 | INFO     | intersect: -3565986238.129386
[2025-06-04 01:57:48] 2025-06-03 23:57:05,256 | INFO     | chi2: 0.00019243517706178935
[2025-06-04 01:57:48] 2025-06-03 23:57:05,256 | INFO     | current chi2=0.00019243517706178935 (change=48.4620841107133 %)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,256 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,258 | INFO     | sum of deviations: 4032417565.9999995
[2025-06-04 01:57:48] 2025-06-03 23:57:05,258 | INFO     | mean x: 1748989243.5
[2025-06-04 01:57:48] 2025-06-03 23:57:05,258 | INFO     | mean y: 2496593.904255319
[2025-06-04 01:57:48] 2025-06-03 23:57:05,258 | INFO     | -- intersect: -3420551117.6747437
[2025-06-04 01:57:48] 2025-06-03 23:57:05,258 | INFO     | intersect: -3420551117.6747437
[2025-06-04 01:57:48] 2025-06-03 23:57:05,258 | INFO     | chi2: 0.00015803647012309615
[2025-06-04 01:57:48] 2025-06-03 23:57:05,258 | INFO     | current chi2=0.00015803647012309615 (change=17.875477583627063 %)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,259 | INFO     | left removable region: 60
[2025-06-04 01:57:48] 2025-06-03 23:57:05,259 | INFO     | sum of square deviations: 1088905998.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,260 | INFO     | sum of deviations: 1953901065.0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,260 | INFO     | mean x: 1748989975.5
[2025-06-04 01:57:48] 2025-06-03 23:57:05,260 | INFO     | mean y: 2498368.6315789474
[2025-06-04 01:57:48] 2025-06-03 23:57:05,260 | INFO     | -- intersect: -3135838073.70637
[2025-06-04 01:57:48] 2025-06-03 23:57:05,260 | INFO     | intersect: -3135838073.70637
[2025-06-04 01:57:48] 2025-06-03 23:57:05,261 | INFO     | chi2: 0.0001247996201556816
[2025-06-04 01:57:48] 2025-06-03 23:57:05,261 | INFO     | -- intersect: -3135838073.70637
[2025-06-04 01:57:48] 2025-06-03 23:57:05,261 | INFO     | current memory leak: 1.79 B/s (using 152 data points, chi2=0.00)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,262 | INFO     | ..............................
[2025-06-04 01:57:48] 2025-06-03 23:57:05,262 | INFO     | . Timing measurements:
[2025-06-04 01:57:48] 2025-06-03 23:57:05,262 | INFO     | . get job = 0 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,262 | INFO     | . initial setup = 2 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,262 | INFO     | . payload setup = 13 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,262 | INFO     | . stage-in = 0 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,262 | INFO     | . payload execution = 13307 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,263 | INFO     | . stage-out = 4 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,263 | INFO     | . log creation = 0 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,263 | INFO     | ..............................
[2025-06-04 01:57:48] 2025-06-03 23:57:05,453 | INFO     | 
[2025-06-04 01:57:48] 2025-06-03 23:57:05,453 | INFO     | job summary report
[2025-06-04 01:57:48] 2025-06-03 23:57:05,453 | INFO     | --------------------------------------------------
[2025-06-04 01:57:48] 2025-06-03 23:57:05,453 | INFO     | PanDA job id: 6677516410
[2025-06-04 01:57:48] 2025-06-03 23:57:05,453 | INFO     | task id: 45006595
[2025-06-04 01:57:48] 2025-06-03 23:57:05,453 | INFO     | errors: (none)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | pilot state: finished 
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | transexitcode: 0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | exeerrorcode: 0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | exeerrordiag: 
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | exitcode: 0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | exitmsg: OK
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | cpuconsumptiontime: 50331 s
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | nevents: 400
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | neventsw: 0
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | pid: 20444
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | pgrp: 20444
[2025-06-04 01:57:48] 2025-06-03 23:57:05,454 | INFO     | corecount: 8
[2025-06-04 01:57:48] 2025-06-03 23:57:05,455 | INFO     | event service: False
[2025-06-04 01:57:48] 2025-06-03 23:57:05,455 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405211, 13: 2405445, 23: 2405501, 13325: 2435136, 13330: 2444135, 13353: 2444277}
[2025-06-04 01:57:48] 2025-06-03 23:57:05,455 | INFO     | --------------------------------------------------
[2025-06-04 01:57:48] 2025-06-03 23:57:05,455 | INFO     | 
[2025-06-04 01:57:48] 2025-06-03 23:57:05,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-06-04 01:57:48] 2025-06-03 23:57:05,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,526 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,526 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:57:48] 2025-06-03 23:57:05,526 | INFO     | job 6677516410 has completed (purged errors)
[2025-06-04 01:57:48] 2025-06-03 23:57:05,526 | INFO     | overall cleanup function is called
[2025-06-04 01:57:48] 2025-06-03 23:57:06,534 | INFO     | --- collectZombieJob: --- 10, [20444]
[2025-06-04 01:57:48] 2025-06-03 23:57:06,534 | INFO     | zombie collector waiting for pid 20444
[2025-06-04 01:57:48] 2025-06-03 23:57:06,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:57:48] 2025-06-03 23:57:06,534 | INFO     | collected zombie processes
[2025-06-04 01:57:48] 2025-06-03 23:57:06,535 | INFO     | will attempt to kill all subprocesses of pid=20444
[2025-06-04 01:57:48] 2025-06-03 23:57:06,684 | INFO     | process IDs to be killed: [20444] (in reverse order)
[2025-06-04 01:57:48] 2025-06-03 23:57:06,966 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:57:48] 2025-06-03 23:57:06,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:57:48] 2025-06-03 23:57:06,969 | INFO     | did not find any defunct processes belonging to 20444
[2025-06-04 01:57:48] 2025-06-03 23:57:06,973 | INFO     | did not find any defunct processes belonging to 20444
[2025-06-04 01:57:48] 2025-06-03 23:57:06,973 | INFO     | ready for new job
[2025-06-04 01:57:48] 2025-06-03 23:57:06,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:57:48] 2025-06-03 23:57:06,975 | INFO     | **************************************
[2025-06-04 01:57:48] 2025-06-03 23:57:06,975 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:57:48] 2025-06-03 23:57:06,975 | INFO     | **************************************
[2025-06-04 01:57:48] 2025-06-03 23:57:06,976 | INFO     | 
[2025-06-04 01:57:48] 2025-06-03 23:57:06,976 | INFO     | pilot is running in a VM
[2025-06-04 01:57:48] 2025-06-03 23:57:06,976 | INFO     | architecture information:
[2025-06-04 01:57:48] 2025-06-03 23:57:06,978 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:57:48] 2025-06-03 23:57:07,001 | INFO     | cat /etc/os-release:
[2025-06-04 01:57:48] NAME="CentOS Linux"
[2025-06-04 01:57:48] VERSION="7 (Core)"
[2025-06-04 01:57:48] ID="centos"
[2025-06-04 01:57:48] ID_LIKE="rhel fedora"
[2025-06-04 01:57:48] VERSION_ID="7"
[2025-06-04 01:57:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:57:48] ANSI_COLOR="0;31"
[2025-06-04 01:57:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:57:48] HOME_URL="https://www.centos.org/"
[2025-06-04 01:57:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:57:48] 
[2025-06-04 01:57:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:57:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:57:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:57:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:57:48] 
[2025-06-04 01:57:48] 2025-06-03 23:57:07,002 | INFO     | **************************************
[2025-06-04 01:57:48] 2025-06-03 23:57:07,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-06-04 01:57:48] 2025-06-03 23:57:07,829 | INFO     | sufficient remaining disk space (497070112768 B)
[2025-06-04 01:57:48] 2025-06-03 23:57:07,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:57:48] 2025-06-03 23:57:07,829 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:57:48] 2025-06-03 23:57:07,829 | INFO     | update_server=False
[2025-06-04 01:57:48] 2025-06-03 23:57:07,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:57:48] 2025-06-03 23:57:07,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:57:48] 2025-06-03 23:57:07,830 | INFO     | aborting loop
[2025-06-04 01:57:48] 2025-06-03 23:57:07,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:57:48] 2025-06-03 23:57:07,842 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:57:48] 2025-06-03 23:57:07,842 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:57:48] 2025-06-03 23:57:07,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:57:48] 2025-06-03 23:57:07,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:57:48] 2025-06-03 23:57:08,113 | INFO     | all data control threads have been joined
[2025-06-04 01:57:48] 2025-06-03 23:57:08,368 | INFO     | all job control threads have been joined
[2025-06-04 01:57:48] 2025-06-03 23:57:08,836 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:08,837 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:08,892 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:08,964 | INFO     | all payload control threads have been joined
[2025-06-04 01:57:48] 2025-06-03 23:57:09,099 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,119 | INFO     | [data] control thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,205 | INFO     | [job] validate thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,278 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,362 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,373 | INFO     | [job] control thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,428 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,838 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:09,970 | INFO     | [payload] control thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:10,065 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:10,295 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:10,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:57:48] 2025-06-03 23:57:10,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:57:48] 2025-06-03 23:57:11,409 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:14,858 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:57:48] 2025-06-03 23:57:16,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723039422272)>', '<ExcThread(monitor, started 139722441606912)>']
[2025-06-04 01:57:48] 2025-06-03 23:57:16,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:57:48] 2025-06-03 23:57:16,896 | INFO     | [monitor] control thread has ended
[2025-06-04 01:57:48] 2025-06-03 23:57:21,650 | INFO     | all workflow threads have been joined
[2025-06-04 01:57:48] 2025-06-03 23:57:21,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:57:48] 2025-06-03 23:57:21,650 | INFO     | traces error code: 0
[2025-06-04 01:57:48] 2025-06-03 23:57:21,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:57:48] 2025-06-03 23:57:21,900 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:57:48] 2025-06-03 23:57:21,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:57:48] 2025-06-03 23:57:22,029 [wrapper] pilotpid: 11378
[2025-06-04 01:57:48] 2025-06-03 23:57:22,108 [wrapper] Pilot exit status: 0
[2025-06-04 01:57:48] 2025-06-03 23:57:22,505 [wrapper] pandaids: 6677516410
[2025-06-04 01:57:48] 2025-06-03 23:57:22,702 [wrapper] cleanup supervisor_pilot 32690 11379
[2025-06-04 01:57:48] 2025-06-03 23:57:22,803 [wrapper] Test setup, not cleaning
[2025-06-04 01:57:48] 2025-06-03 23:57:22,924 [wrapper] apfmon messages muted
[2025-06-04 01:57:48] 2025-06-03 23:57:23,022 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:57:48] 2025-06-03 23:57:23,140 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:57:48]  *** Error codes and diagnostics ***
[2025-06-04 01:57:48]     "exeErrorCode": 0,
[2025-06-04 01:57:48]     "exeErrorDiag": "",
[2025-06-04 01:57:48]     "pilotErrorCode": 0,
[2025-06-04 01:57:48]     "pilotErrorDiag": "",
[2025-06-04 01:57:48]  *** Listing of results directory ***
[2025-06-04 01:57:48] total 394312
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc    495897 Jun  3 09:23 pilot3.tar.gz
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc      5111 Jun  3 09:35 queuedata.json
[2025-06-04 01:57:48] -rwx------. 1 boinc boinc     37140 Jun  3 09:35 runpilot2-wrapper.sh
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc       100 Jun  3 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:57:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 22:13 run_atlas
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc       105 Jun  3 22:13 job.xml
[2025-06-04 01:57:48] -rw-r--r--. 2 boinc boinc 214865766 Jun  3 22:13 EVNT.45006593._000960.pool.root.1
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc      6392 Jun  3 22:13 init_data.xml
[2025-06-04 01:57:48] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:13 start_atlas.sh
[2025-06-04 01:57:48] drwxrwx--x. 2 boinc boinc        68 Jun  3 22:13 shared
[2025-06-04 01:57:48] -rw-r--r--. 2 boinc boinc    508878 Jun  3 22:13 input.tar.gz
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc         0 Jun  3 22:13 boinc_lockfile
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc      2524 Jun  3 22:13 pandaJob.out
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc    986893 Jun  3 22:13 agis_schedconf.cvmfs.json
[2025-06-04 01:57:48] drwx------. 4 boinc boinc      4096 Jun  3 22:14 pilot3
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc 181993085 Jun  4 01:55 HITS.45006595._024000.pool.root.1
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc       531 Jun  4 01:55 boinc_task_state.xml
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc        95 Jun  4 01:56 pilot_heartbeat.json
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc      1019 Jun  4 01:56 memory_monitor_summary.json
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc   1603667 Jun  4 01:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc    380144 Jun  4 01:56 log.45006595._024000.job.log.tgz.1
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc      7685 Jun  4 01:57 heartbeat.json
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc      4540 Jun  4 01:57 pilotlog.txt
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc   1168509 Jun  4 01:57 log.45006595._024000.job.log.1
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc       357 Jun  4 01:57 output.list
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc       620 Jun  4 01:57 runtime_log
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc   1566720 Jun  4 01:57 result.tar.gz
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc       657 Jun  4 01:57 wKaLDmqMbg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgoXKDmHLsFXn.diag
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc      8673 Jun  4 01:57 runtime_log.err
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc      8192 Jun  4 01:57 boinc_mmap_file
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc        28 Jun  4 01:57 wrapper_checkpoint.txt
[2025-06-04 01:57:48] -rw-r--r--. 1 boinc boinc     20489 Jun  4 01:57 stderr.txt
[2025-06-04 01:57:48] HITS file was successfully produced:
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc 181993085 Jun  4 01:55 shared/HITS.pool.root.1
[2025-06-04 01:57:48]  *** Contents of shared directory: ***
[2025-06-04 01:57:48] total 389608
[2025-06-04 01:57:48] -rw-r--r--. 2 boinc boinc 214865766 Jun  3 22:13 ATLAS.root_0
[2025-06-04 01:57:48] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:13 start_atlas.sh
[2025-06-04 01:57:48] -rw-r--r--. 2 boinc boinc    508878 Jun  3 22:13 input.tar.gz
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc 181993085 Jun  4 01:55 HITS.pool.root.1
[2025-06-04 01:57:48] -rw-------. 1 boinc boinc   1566720 Jun  4 01:57 result.tar.gz
01:57:50 (7603): run_atlas exited; CPU time 50500.589796
01:57:50 (7603): called boinc_finish(0)

</stderr_txt>
]]>

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