Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:20:30 (23204): wrapper (7.7.26015): starting
21:20:30 (23204): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:20:30] Arguments: --nthreads 8
[2025-06-03 21:20:30] Threads: 8
[2025-06-03 21:20:30] Checking for CVMFS
[2025-06-03 21:20:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:20:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:20:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:20:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:20:31] 2.11.2.0 702 32362 84252 146753 3 108 18259905 25165824 4103 130560 0 17970331 99.794 19445343 2293 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 21:20:31] CVMFS is ok
[2025-06-03 21:20:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:20:31] Checking for apptainer binary...
[2025-06-03 21:20:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:20:31] Running /usr/bin/apptainer --version
[2025-06-03 21:20:31] apptainer version 1.3.2-1.el7
[2025-06-03 21:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:20:32] cg-vwn487.simple-grid.lan
[2025-06-03 21:20:32] apptainer works
[2025-06-03 21:20:32] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:20:32] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:20:33] Starting ATLAS job with PandaID=6677549087
[2025-06-03 21:20:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:51:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:51:49] 2025-06-03 22:51:34,503 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:51:49] 2025-06-03 22:51:34,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:51:49] 2025-06-03 22:51:34,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:51:49] 2025-06-03 22:51:34,508 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:51:49] 2025-06-03 22:51:34,509 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 00:51:49] 2025-06-03 22:51:34,510 | INFO     | sum of deviations: 8030789019.000004
[2025-06-04 00:51:49] 2025-06-03 22:51:34,510 | INFO     | mean x: 1748984766.5
[2025-06-04 00:51:49] 2025-06-03 22:51:34,511 | INFO     | mean y: 2489574.0970873786
[2025-06-04 00:51:49] 2025-06-03 22:51:34,511 | INFO     | -- intersect: -5179235804.045068
[2025-06-04 00:51:49] 2025-06-03 22:51:34,511 | INFO     | intersect: -5179235804.045068
[2025-06-04 00:51:49] 2025-06-03 22:51:34,511 | INFO     | chi2: 1.6468659458022636
[2025-06-04 00:51:49] 2025-06-03 22:51:34,511 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,513 | INFO     | sum of deviations: 7748854277.999992
[2025-06-04 00:51:49] 2025-06-03 22:51:34,513 | INFO     | mean x: 1748984614.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,513 | INFO     | mean y: 2489351.0447761193
[2025-06-04 00:51:49] 2025-06-03 22:51:34,513 | INFO     | -- intersect: -5379807368.868792
[2025-06-04 00:51:49] 2025-06-03 22:51:34,513 | INFO     | intersect: -5379807368.868792
[2025-06-04 00:51:49] 2025-06-03 22:51:34,514 | INFO     | chi2: 1.6473892491657636
[2025-06-04 00:51:49] 2025-06-03 22:51:34,514 | INFO     | current chi2=1.6473892491657636 (change=-0.03177571100026617 %)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,514 | INFO     | right removable region: 200
[2025-06-04 00:51:49] 2025-06-03 22:51:34,514 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,516 | INFO     | sum of deviations: -23698194573.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,516 | INFO     | mean x: 1748984919.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,516 | INFO     | mean y: 2514418.84079602
[2025-06-04 00:51:49] 2025-06-03 22:51:34,516 | INFO     | -- intersect: 16463107505.929548
[2025-06-04 00:51:49] 2025-06-03 22:51:34,516 | INFO     | intersect: 16463107505.929548
[2025-06-04 00:51:49] 2025-06-03 22:51:34,516 | INFO     | chi2: 0.14542789370890694
[2025-06-04 00:51:49] 2025-06-03 22:51:34,516 | INFO     | current chi2=0.14542789370890694 (change=91.16941521077709 %)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,517 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,518 | INFO     | sum of deviations: -19693273611.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,518 | INFO     | mean x: 1748985071.5
[2025-06-04 00:51:49] 2025-06-03 22:51:34,518 | INFO     | mean y: 2511053.9591836734
[2025-06-04 00:51:49] 2025-06-03 22:51:34,518 | INFO     | -- intersect: 14755115042.208546
[2025-06-04 00:51:49] 2025-06-03 22:51:34,519 | INFO     | intersect: 14755115042.208546
[2025-06-04 00:51:49] 2025-06-03 22:51:34,519 | INFO     | chi2: 0.13074546847860793
[2025-06-04 00:51:49] 2025-06-03 22:51:34,519 | INFO     | current chi2=0.13074546847860793 (change=10.09601724665545 %)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,519 | INFO     | left removable region: 20
[2025-06-04 00:51:49] 2025-06-03 22:51:34,519 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,520 | INFO     | sum of deviations: -5727459580.0
[2025-06-04 00:51:49] 2025-06-03 22:51:34,521 | INFO     | mean x: 1748985193.5
[2025-06-04 00:51:49] 2025-06-03 22:51:34,521 | INFO     | mean y: 2498478.6555555556
[2025-06-04 00:51:49] 2025-06-03 22:51:34,521 | INFO     | -- intersect: 5541935521.813062
[2025-06-04 00:51:49] 2025-06-03 22:51:34,521 | INFO     | intersect: 5541935521.813062
[2025-06-04 00:51:49] 2025-06-03 22:51:34,521 | INFO     | chi2: 0.06634612908595888
[2025-06-04 00:51:49] 2025-06-03 22:51:34,521 | INFO     | -- intersect: 5541935521.813062
[2025-06-04 00:51:49] 2025-06-03 22:51:34,522 | INFO     | current memory leak: -3.17 B/s (using 180 data points, chi2=0.07)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | ..............................
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . Timing measurements:
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . get job = 0 s
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . initial setup = 7 s
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . payload setup = 14 s
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . stage-in = 0 s
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . payload execution = 12574 s
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . stage-out = 1 s
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | . log creation = 0 s
[2025-06-04 00:51:49] 2025-06-03 22:51:34,523 | INFO     | ..............................
[2025-06-04 00:51:49] 2025-06-03 22:51:34,767 | INFO     | sufficient remaining disk space (497072209920 B)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,767 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,768 | INFO     | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-6677549087: 3766626 B (within 2537553920 B limit)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,768 | INFO     | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-6677549087/HITS.45006595._026609.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,768 | INFO     | total size of present files: 0 B (workdir size: 3766626 B)
[2025-06-04 00:51:49] 2025-06-03 22:51:34,769 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-6677549087/HITS.45006595._026609.pool.root.1 since it does not exist
[2025-06-04 00:51:49] 2025-06-03 22:51:34,909 | INFO     | number of running child processes to parent process 5019: 1
[2025-06-04 00:51:49] 2025-06-03 22:51:34,909 | INFO     | maximum number of monitored processes: 6
[2025-06-04 00:51:49] 2025-06-03 22:51:34,909 | INFO     | aborting job monitoring since job object (job id=6677549087) has expired
[2025-06-04 00:51:49] 2025-06-03 22:51:35,144 | INFO     | 
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | job summary report
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | --------------------------------------------------
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | PanDA job id: 6677549087
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | task id: 45006595
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | errors: (none)
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | pilot state: finished 
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | transexitcode: 0
[2025-06-04 00:51:49] 2025-06-03 22:51:35,145 | INFO     | exeerrorcode: 0
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | exeerrordiag: 
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | exitcode: 0
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | exitmsg: OK
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | cpuconsumptiontime: 46030 s
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | nevents: 400
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | neventsw: 0
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | pid: 5019
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | pgrp: 5019
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | corecount: 8
[2025-06-04 00:51:49] 2025-06-03 22:51:35,146 | INFO     | event service: False
[2025-06-04 00:51:49] 2025-06-03 22:51:35,147 | INFO     | sizes: {0: 2405013, 1: 2405212, 9: 2405418, 12: 2405446, 12592: 2434672, 12594: 2443613, 12595: 2443797, 12615: 2443967}
[2025-06-04 00:51:49] 2025-06-03 22:51:35,147 | INFO     | --------------------------------------------------
[2025-06-04 00:51:49] 2025-06-03 22:51:35,147 | INFO     | 
[2025-06-04 00:51:49] 2025-06-03 22:51:35,147 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 00:51:49] 2025-06-03 22:51:35,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:51:49] 2025-06-03 22:51:35,248 | INFO     | job 6677549087 has completed (purged errors)
[2025-06-04 00:51:49] 2025-06-03 22:51:35,249 | INFO     | overall cleanup function is called
[2025-06-04 00:51:49] 2025-06-03 22:51:36,257 | INFO     | --- collectZombieJob: --- 10, [5019]
[2025-06-04 00:51:49] 2025-06-03 22:51:36,257 | INFO     | zombie collector waiting for pid 5019
[2025-06-04 00:51:49] 2025-06-03 22:51:36,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:51:49] 2025-06-03 22:51:36,257 | INFO     | collected zombie processes
[2025-06-04 00:51:49] 2025-06-03 22:51:36,257 | INFO     | will attempt to kill all subprocesses of pid=5019
[2025-06-04 00:51:49] 2025-06-03 22:51:36,343 | INFO     | process IDs to be killed: [5019] (in reverse order)
[2025-06-04 00:51:49] 2025-06-03 22:51:36,416 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:51:49] 2025-06-03 22:51:36,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:51:49] 2025-06-03 22:51:36,419 | INFO     | did not find any defunct processes belonging to 5019
[2025-06-04 00:51:49] 2025-06-03 22:51:36,422 | INFO     | did not find any defunct processes belonging to 5019
[2025-06-04 00:51:49] 2025-06-03 22:51:36,423 | INFO     | ready for new job
[2025-06-04 00:51:49] 2025-06-03 22:51:36,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:51:49] 2025-06-03 22:51:36,425 | INFO     | **************************************
[2025-06-04 00:51:49] 2025-06-03 22:51:36,425 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:51:49] 2025-06-03 22:51:36,425 | INFO     | **************************************
[2025-06-04 00:51:49] 2025-06-03 22:51:36,426 | INFO     | 
[2025-06-04 00:51:49] 2025-06-03 22:51:36,426 | INFO     | pilot is running in a VM
[2025-06-04 00:51:49] 2025-06-03 22:51:36,426 | INFO     | architecture information:
[2025-06-04 00:51:49] 2025-06-03 22:51:36,427 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:51:49] 2025-06-03 22:51:36,459 | INFO     | cat /etc/os-release:
[2025-06-04 00:51:49] NAME="CentOS Linux"
[2025-06-04 00:51:49] VERSION="7 (Core)"
[2025-06-04 00:51:49] ID="centos"
[2025-06-04 00:51:49] ID_LIKE="rhel fedora"
[2025-06-04 00:51:49] VERSION_ID="7"
[2025-06-04 00:51:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:51:49] ANSI_COLOR="0;31"
[2025-06-04 00:51:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:51:49] HOME_URL="https://www.centos.org/"
[2025-06-04 00:51:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:51:49] 
[2025-06-04 00:51:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:51:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:51:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:51:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:51:49] 
[2025-06-04 00:51:49] 2025-06-03 22:51:36,459 | INFO     | **************************************
[2025-06-04 00:51:49] 2025-06-03 22:51:36,962 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 00:51:49] 2025-06-03 22:51:37,079 | INFO     | sufficient remaining disk space (497076404224 B)
[2025-06-04 00:51:49] 2025-06-03 22:51:37,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:51:49] 2025-06-03 22:51:37,080 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:51:49] 2025-06-03 22:51:37,080 | INFO     | update_server=False
[2025-06-04 00:51:49] 2025-06-03 22:51:37,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:51:49] 2025-06-03 22:51:37,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:51:49] 2025-06-03 22:51:37,413 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 00:51:49] 2025-06-03 22:51:37,413 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 00:51:49] 2025-06-03 22:51:37,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:51:49] 2025-06-03 22:51:37,413 | INFO     | will abort loop
[2025-06-04 00:51:49] 2025-06-03 22:51:37,474 | INFO     | all data control threads have been joined
[2025-06-04 00:51:49] 2025-06-03 22:51:37,829 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:51:49] 2025-06-03 22:51:37,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:51:49] 2025-06-03 22:51:37,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:51:49] 2025-06-03 22:51:37,978 | INFO     | all payload control threads have been joined
[2025-06-04 00:51:49] 2025-06-03 22:51:38,060 | INFO     | all job control threads have been joined
[2025-06-04 00:51:49] 2025-06-03 22:51:38,086 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:38,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:51:49] 2025-06-03 22:51:38,299 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:38,346 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:38,420 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:38,481 | INFO     | [data] control thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:38,504 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:38,985 | INFO     | [payload] control thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,067 | INFO     | [job] control thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,088 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,128 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,194 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,224 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,377 | INFO     | [job] validate thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,601 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:39,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:51:49] 2025-06-03 22:51:40,674 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:42,294 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:51:49] 2025-06-03 22:51:43,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891793106752)>', '<ExcThread(monitor, started 139891237185280)>']
[2025-06-04 00:51:49] 2025-06-03 22:51:43,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:51:49] 2025-06-03 22:51:43,863 | INFO     | [monitor] control thread has ended
[2025-06-04 00:51:49] 2025-06-03 22:51:48,699 | INFO     | all workflow threads have been joined
[2025-06-04 00:51:49] 2025-06-03 22:51:48,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:51:49] 2025-06-03 22:51:48,700 | INFO     | traces error code: 0
[2025-06-04 00:51:49] 2025-06-03 22:51:48,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:51:49] 2025-06-03 22:51:48,910 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:51:49] 2025-06-03 22:51:48,916 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:51:49] 2025-06-03 22:51:48,932 [wrapper] pilotpid: 26881
[2025-06-04 00:51:49] 2025-06-03 22:51:48,940 [wrapper] Pilot exit status: 0
[2025-06-04 00:51:49] 2025-06-03 22:51:49,092 [wrapper] pandaids: 6677549087
[2025-06-04 00:51:49] 2025-06-03 22:51:49,185 [wrapper] cleanup supervisor_pilot  2245 26882
[2025-06-04 00:51:49] 2025-06-03 22:51:49,189 [wrapper] Test setup, not cleaning
[2025-06-04 00:51:49] 2025-06-03 22:51:49,192 [wrapper] apfmon messages muted
[2025-06-04 00:51:49] 2025-06-03 22:51:49,206 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:51:49] 2025-06-03 22:51:49,221 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:51:49]  *** Error codes and diagnostics ***
[2025-06-04 00:51:49]     "exeErrorCode": 0,
[2025-06-04 00:51:49]     "exeErrorDiag": "",
[2025-06-04 00:51:49]     "pilotErrorCode": 0,
[2025-06-04 00:51:49]     "pilotErrorDiag": "",
[2025-06-04 00:51:49]  *** Listing of results directory ***
[2025-06-04 00:51:49] total 389604
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:43 pilot3.tar.gz
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:01 queuedata.json
[2025-06-04 00:51:49] -rwx------. 1 boinc boinc     37140 Jun  3 11:03 runpilot2-wrapper.sh
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:51:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:20 run_atlas
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:20 job.xml
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc      6391 Jun  3 21:20 init_data.xml
[2025-06-04 00:51:49] -rw-r--r--. 2 boinc boinc 213934058 Jun  3 21:20 EVNT.45006593._001064.pool.root.1
[2025-06-04 00:51:49] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:20 start_atlas.sh
[2025-06-04 00:51:49] drwxrwx--x. 2 boinc boinc        68 Jun  3 21:20 shared
[2025-06-04 00:51:49] -rw-r--r--. 2 boinc boinc    508880 Jun  3 21:20 input.tar.gz
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:20 boinc_lockfile
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:20 pandaJob.out
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc    986893 Jun  3 21:20 agis_schedconf.cvmfs.json
[2025-06-04 00:51:49] drwx------. 4 boinc boinc      4096 Jun  3 21:20 pilot3
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc 178246810 Jun  4 00:50 HITS.45006595._026609.pool.root.1
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc        95 Jun  4 00:50 pilot_heartbeat.json
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc       531 Jun  4 00:51 boinc_task_state.xml
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc      1020 Jun  4 00:51 memory_monitor_summary.json
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc   1603667 Jun  4 00:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc    378250 Jun  4 00:51 log.45006595._026609.job.log.tgz.1
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc      7682 Jun  4 00:51 heartbeat.json
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc      8192 Jun  4 00:51 boinc_mmap_file
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc      4602 Jun  4 00:51 pilotlog.txt
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc        28 Jun  4 00:51 wrapper_checkpoint.txt
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc   1100608 Jun  4 00:51 log.45006595._026609.job.log.1
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc       357 Jun  4 00:51 output.list
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc       620 Jun  4 00:51 runtime_log
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc   1495040 Jun  4 00:51 result.tar.gz
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc      8659 Jun  4 00:51 runtime_log.err
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc       657 Jun  4 00:51 eKIKDmOjcg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI6iKDmm4aTEo.diag
[2025-06-04 00:51:49] -rw-r--r--. 1 boinc boinc     20893 Jun  4 00:51 stderr.txt
[2025-06-04 00:51:49] HITS file was successfully produced:
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc 178246810 Jun  4 00:50 shared/HITS.pool.root.1
[2025-06-04 00:51:49]  *** Contents of shared directory: ***
[2025-06-04 00:51:49] total 384968
[2025-06-04 00:51:49] -rw-r--r--. 2 boinc boinc 213934058 Jun  3 21:20 ATLAS.root_0
[2025-06-04 00:51:49] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:20 start_atlas.sh
[2025-06-04 00:51:49] -rw-r--r--. 2 boinc boinc    508880 Jun  3 21:20 input.tar.gz
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc 178246810 Jun  4 00:50 HITS.pool.root.1
[2025-06-04 00:51:49] -rw-------. 1 boinc boinc   1495040 Jun  4 00:51 result.tar.gz
00:51:51 (23204): run_atlas exited; CPU time 46179.176796
00:51:51 (23204): called boinc_finish(0)

</stderr_txt>
]]>

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