Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:45 (122844): wrapper (7.7.26015): starting
06:02:45 (122844): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:02:45] Arguments: --nthreads 8
[2025-06-03 06:02:45] Threads: 8
[2025-06-03 06:02:45] Checking for CVMFS
[2025-06-03 06:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:02:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:02:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:02:46] 2.11.2.0 7082 27197 147952 146737 0 194 17116250 18432001 4990 130560 0 96331483 99.512 96804852 30375 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 06:02:46] CVMFS is ok
[2025-06-03 06:02:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 06:02:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 06:02:46] Further information can be found at the LHC@home message board.
[2025-06-03 06:02:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:02:46] Checking for apptainer binary...
[2025-06-03 06:02:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:02:46] Running /usr/bin/apptainer --version
[2025-06-03 06:02:46] apptainer version 1.3.2-1.el7
[2025-06-03 06:02:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:02:46] c-211-35-3.aglt2.org
[2025-06-03 06:02:46] apptainer works
[2025-06-03 06:02:46] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:02:46] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:02:47] Starting ATLAS job with PandaID=6677469368
[2025-06-03 06:02:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:21:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:21:16]  filetype=log
[2025-06-03 07:21:16]  guid=a7180847-5572-4c87-804c-eefcaadc3677
[2025-06-03 07:21:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 07:21:16]  is_altstaged=None
[2025-06-03 07:21:16]  is_tar=False
[2025-06-03 07:21:16]  lfn=log.45006595._020069.job.log.tgz.1
[2025-06-03 07:21:16]  mtime=0
[2025-06-03 07:21:16]  protocol_id=None
[2025-06-03 07:21:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 07:21:16]  replicas=None
[2025-06-03 07:21:16]  scope=mc23_13p6TeV
[2025-06-03 07:21:16]  status=None
[2025-06-03 07:21:16]  status_code=0
[2025-06-03 07:21:16]  storage_token=
[2025-06-03 07:21:16]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6677469368/log.45006595._020069.job.log.tgz.1
[2025-06-03 07:21:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/ac/log.45006595._020069.job.log.tgz.1
[2025-06-03 07:21:16]  workdir=None
[2025-06-03 07:21:16] ]
[2025-06-03 07:21:16] 2025-06-03 11:20:50,472 | INFO     | transferring file log.45006595._020069.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6677469368/log.45006595._020069.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 07:21:16] 2025-06-03 11:20:50,472 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6677469368/log.45006595._020069.job.log.tgz.1 /tmp/boinchome/slots/5/log.45006595._020069.job
[2025-06-03 07:21:16] 2025-06-03 11:20:50,490 | INFO     | adding to output.list: log.45006595._020069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/ac/log.45006595._020069.job.log.tg
[2025-06-03 07:21:16] 2025-06-03 11:20:50,490 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 07:21:16] 2025-06-03 11:20:50,490 | INFO     | summary of transferred files:
[2025-06-03 07:21:16] 2025-06-03 11:20:50,490 | INFO     |  -- lfn=log.45006595._020069.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 07:21:16] 2025-06-03 11:20:50,490 | INFO     | stage-out finished correctly
[2025-06-03 07:21:16] 2025-06-03 11:20:52,514 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 07:21:16] 2025-06-03 11:20:52,609 | INFO     | job 6677469368 has state=finished
[2025-06-03 07:21:16] 2025-06-03 11:20:52,609 | INFO     | preparing for final server update for job 6677469368 in state='finished'
[2025-06-03 07:21:16] 2025-06-03 11:20:52,610 | INFO     | this job has now completed (state=finished)
[2025-06-03 07:21:16] 2025-06-03 11:20:52,610 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 07:21:16] 2025-06-03 11:20:52,610 | INFO     | log transfer has been attempted: DONE
[2025-06-03 07:21:16] 2025-06-03 11:20:52,610 | INFO     | job 6677469368 has finished - writing final server update
[2025-06-03 07:21:16] 2025-06-03 11:20:52,610 | INFO     | total number of processed events: 400 (read)
[2025-06-03 07:21:16] 2025-06-03 11:20:52,618 | INFO     | executing command: lscpu
[2025-06-03 07:21:16] 2025-06-03 11:20:52,623 | INFO     | monitor loop #352: job 0:6677469368 is in state 'finished'
[2025-06-03 07:21:16] 2025-06-03 11:20:52,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 07:21:16] 2025-06-03 11:20:52,703 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 07:21:16] 2025-06-03 11:20:55,126 | INFO     | monitor loop #353: job 0:6677469368 is in state 'finished'
[2025-06-03 07:21:16] 2025-06-03 11:20:55,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 07:21:16] 2025-06-03 11:20:55,787 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 07:21:16] 2025-06-03 11:20:55,788 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6677469368/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:21:16] 2025-06-03 11:20:55,788 | INFO     | extracted standard info from prmon json
[2025-06-03 07:21:16] 2025-06-03 11:20:55,789 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:21:16] 2025-06-03 11:20:55,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:21:16] 2025-06-03 11:20:55,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:21:16] 2025-06-03 11:20:55,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:21:16] 2025-06-03 11:20:55,791 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:21:16] 2025-06-03 11:20:55,791 | INFO     | sum of square deviations: 106336877.5
[2025-06-03 07:21:16] 2025-06-03 11:20:55,791 | INFO     | sum of deviations: 1036095156.5
[2025-06-03 07:21:16] 2025-06-03 11:20:55,791 | INFO     | mean x: 1748947407.5
[2025-06-03 07:21:16] 2025-06-03 11:20:55,792 | INFO     | mean y: 2483203.4142857143
[2025-06-03 07:21:16] 2025-06-03 11:20:55,792 | INFO     | -- intersect: -17038415311.627985
[2025-06-03 07:21:16] 2025-06-03 11:20:55,792 | INFO     | intersect: -17038415311.627985
[2025-06-03 07:21:16] 2025-06-03 11:20:55,792 | INFO     | chi2: 0.0010184471799148866
[2025-06-03 07:21:16] 2025-06-03 11:20:55,792 | INFO     | -- intersect: -17038415311.627985
[2025-06-03 07:21:16] 2025-06-03 11:20:55,792 | INFO     | current memory leak: 9.74 B/s (using 70 data points, chi2=0.00)
[2025-06-03 07:21:16] 2025-06-03 11:20:55,792 | INFO     | ..............................
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . Timing measurements:
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . get job = 0 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . initial setup = 2 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . payload setup = 5 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . stage-in = 0 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . payload execution = 4651 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . stage-out = 0 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | . log creation = 0 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,793 | INFO     | ..............................
[2025-06-03 07:21:16] 2025-06-03 11:20:55,862 | INFO     | 
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | job summary report
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | --------------------------------------------------
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | PanDA job id: 6677469368
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | task id: 45006595
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | errors: (none)
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | pilot state: finished 
[2025-06-03 07:21:16] 2025-06-03 11:20:55,863 | INFO     | transexitcode: 0
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | exeerrorcode: 0
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | exeerrordiag: 
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | exitcode: 0
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | exitmsg: OK
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | cpuconsumptiontime: 34999 s
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | nevents: 400
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | neventsw: 0
[2025-06-03 07:21:16] 2025-06-03 11:20:55,864 | INFO     | pid: 133246
[2025-06-03 07:21:16] 2025-06-03 11:20:55,865 | INFO     | pgrp: 133246
[2025-06-03 07:21:16] 2025-06-03 11:20:55,865 | INFO     | corecount: 8
[2025-06-03 07:21:16] 2025-06-03 11:20:55,865 | INFO     | event service: False
[2025-06-03 07:21:16] 2025-06-03 11:20:55,865 | INFO     | sizes: {0: 2405011, 1: 2405210, 4: 2405416, 11: 2405444, 4660: 2431615, 4661: 2440556, 4663: 2440740, 4666: 2440910}
[2025-06-03 07:21:16] 2025-06-03 11:20:55,865 | INFO     | --------------------------------------------------
[2025-06-03 07:21:16] 2025-06-03 11:20:55,865 | INFO     | 
[2025-06-03 07:21:16] 2025-06-03 11:20:55,865 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-03 07:21:16] 2025-06-03 11:20:55,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:21:16] 2025-06-03 11:20:55,890 | INFO     | job 6677469368 has completed (purged errors)
[2025-06-03 07:21:16] 2025-06-03 11:20:55,890 | INFO     | overall cleanup function is called
[2025-06-03 07:21:16] 2025-06-03 11:20:56,898 | INFO     | --- collectZombieJob: --- 10, [133246]
[2025-06-03 07:21:16] 2025-06-03 11:20:56,898 | INFO     | zombie collector waiting for pid 133246
[2025-06-03 07:21:16] 2025-06-03 11:20:56,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:21:16] 2025-06-03 11:20:56,899 | INFO     | collected zombie processes
[2025-06-03 07:21:16] 2025-06-03 11:20:56,899 | INFO     | will attempt to kill all subprocesses of pid=133246
[2025-06-03 07:21:16] 2025-06-03 11:20:57,099 | INFO     | process IDs to be killed: [133246] (in reverse order)
[2025-06-03 07:21:16] 2025-06-03 11:20:57,180 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:21:16] 2025-06-03 11:20:57,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:21:16] 2025-06-03 11:20:57,186 | INFO     | did not find any defunct processes belonging to 133246
[2025-06-03 07:21:16] 2025-06-03 11:20:57,190 | INFO     | did not find any defunct processes belonging to 133246
[2025-06-03 07:21:16] 2025-06-03 11:20:57,191 | INFO     | ready for new job
[2025-06-03 07:21:16] 2025-06-03 11:20:57,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:21:16] 2025-06-03 11:20:57,192 | INFO     | **************************************
[2025-06-03 07:21:16] 2025-06-03 11:20:57,192 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:21:16] 2025-06-03 11:20:57,192 | INFO     | **************************************
[2025-06-03 07:21:16] 2025-06-03 11:20:57,192 | INFO     | 
[2025-06-03 07:21:16] 2025-06-03 11:20:57,196 | INFO     | architecture information:
[2025-06-03 07:21:16] 2025-06-03 11:20:57,196 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:21:16] 2025-06-03 11:20:57,216 | INFO     | cat /etc/os-release:
[2025-06-03 07:21:16] NAME="CentOS Linux"
[2025-06-03 07:21:16] VERSION="7 (Core)"
[2025-06-03 07:21:16] ID="centos"
[2025-06-03 07:21:16] ID_LIKE="rhel fedora"
[2025-06-03 07:21:16] VERSION_ID="7"
[2025-06-03 07:21:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:21:16] ANSI_COLOR="0;31"
[2025-06-03 07:21:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:21:16] HOME_URL="https://www.centos.org/"
[2025-06-03 07:21:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:21:16] 
[2025-06-03 07:21:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:21:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:21:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:21:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:21:16] 
[2025-06-03 07:21:16] 2025-06-03 11:20:57,216 | INFO     | **************************************
[2025-06-03 07:21:16] 2025-06-03 11:20:57,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-03 07:21:16] 2025-06-03 11:20:57,736 | INFO     | sufficient remaining disk space (103461945344 B)
[2025-06-03 07:21:16] 2025-06-03 11:20:57,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:21:16] 2025-06-03 11:20:57,736 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:21:16] 2025-06-03 11:20:57,737 | INFO     | update_server=False
[2025-06-03 07:21:16] 2025-06-03 11:20:57,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:21:16] 2025-06-03 11:20:57,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:21:16] 2025-06-03 11:20:57,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:21:16] 2025-06-03 11:20:57,738 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:21:16] 2025-06-03 11:20:57,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:21:16] 2025-06-03 11:20:57,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:21:16] 2025-06-03 11:20:58,172 | INFO     | all job control threads have been joined
[2025-06-03 07:21:16] 2025-06-03 11:20:58,300 | INFO     | all data control threads have been joined
[2025-06-03 07:21:16] 2025-06-03 11:20:58,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:21:16] 2025-06-03 11:20:58,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:21:16] 2025-06-03 11:20:58,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:21:16] 2025-06-03 11:20:58,636 | INFO     | aborting loop
[2025-06-03 07:21:16] 2025-06-03 11:20:58,743 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:58,744 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:58,802 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:58,981 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:59,178 | INFO     | [job] control thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:59,210 | INFO     | all payload control threads have been joined
[2025-06-03 07:21:16] 2025-06-03 11:20:59,306 | INFO     | [data] control thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:59,642 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:59,853 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:59,870 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:20:59,910 | INFO     | [job] validate thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:21:00,143 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:21:00,215 | INFO     | [payload] control thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:21:00,216 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:21:00,547 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:21:02,626 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:21:08,773 | INFO     | job.realtimelogging is not enabled
[2025-06-03 07:21:16] 2025-06-03 11:21:09,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:21:16] 2025-06-03 11:21:11,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801008547648)>', '<ExcThread(monitor, started 139800573110016)>']
[2025-06-03 07:21:16] 2025-06-03 11:21:11,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:21:16] 2025-06-03 11:21:11,812 | INFO     | [monitor] control thread has ended
[2025-06-03 07:21:16] 2025-06-03 11:21:16,633 | INFO     | all workflow threads have been joined
[2025-06-03 07:21:16] 2025-06-03 11:21:16,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:21:16] 2025-06-03 11:21:16,634 | INFO     | traces error code: 0
[2025-06-03 07:21:16] 2025-06-03 11:21:16,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:21:16] 2025-06-03 11:21:16,738 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:21:16] 2025-06-03 11:21:16,741 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:21:16] 2025-06-03 11:21:16,745 [wrapper] pilotpid: 126415
[2025-06-03 07:21:16] 2025-06-03 11:21:16,747 [wrapper] Pilot exit status: 0
[2025-06-03 07:21:16] 2025-06-03 11:21:16,755 [wrapper] pandaids: 6677469368
[2025-06-03 07:21:16] 2025-06-03 11:21:16,801 [wrapper] cleanup supervisor_pilot 280077 126416
[2025-06-03 07:21:16] 2025-06-03 11:21:16,804 [wrapper] Test setup, not cleaning
[2025-06-03 07:21:16] 2025-06-03 11:21:16,806 [wrapper] apfmon messages muted
[2025-06-03 07:21:16] 2025-06-03 11:21:16,808 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:21:16] 2025-06-03 11:21:16,810 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:21:16]  *** Error codes and diagnostics ***
[2025-06-03 07:21:16]     "exeErrorCode": 0,
[2025-06-03 07:21:16]     "exeErrorDiag": "",
[2025-06-03 07:21:16]     "pilotErrorCode": 0,
[2025-06-03 07:21:16]     "pilotErrorDiag": "",
[2025-06-03 07:21:16]  *** Listing of results directory ***
[2025-06-03 07:21:16] total 399744
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 00:53 pilot3.tar.gz
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 00:58 queuedata.json
[2025-06-03 07:21:16] -rwx------ 1 boincer umatlas     37140 Jun  3 00:58 runpilot2-wrapper.sh
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas       100 Jun  3 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:21:16] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 06:02 run_atlas
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas       105 Jun  3 06:02 job.xml
[2025-06-03 07:21:16] -rw-r--r-- 2 boincer umatlas 214740233 Jun  3 06:02 EVNT.45006593._000803.pool.root.1
[2025-06-03 07:21:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:02 start_atlas.sh
[2025-06-03 07:21:16] drwxrwx--x 2 boincer umatlas      4096 Jun  3 06:02 shared
[2025-06-03 07:21:16] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 06:02 input.tar.gz
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas         0 Jun  3 06:02 boinc_lockfile
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 06:02 pandaJob.out
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas    985490 Jun  3 06:02 agis_schedconf.cvmfs.json
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas   1603667 Jun  3 06:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:21:16] drwx------ 4 boincer umatlas      4096 Jun  3 06:02 pilot3
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas      6299 Jun  3 07:13 init_data.xml
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas       530 Jun  3 07:20 boinc_task_state.xml
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas 189223390 Jun  3 07:20 HITS.45006595._020069.pool.root.1
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas      1049 Jun  3 07:20 memory_monitor_summary.json
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas    306901 Jun  3 07:20 log.45006595._020069.job.log.tgz.1
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas      7739 Jun  3 07:20 heartbeat.json
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 07:20 boinc_mmap_file
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas        27 Jun  3 07:20 wrapper_checkpoint.txt
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas        95 Jun  3 07:20 pilot_heartbeat.json
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas      4549 Jun  3 07:21 pilotlog.txt
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas    462984 Jun  3 07:21 log.45006595._020069.job.log.1
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas       357 Jun  3 07:21 output.list
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas       620 Jun  3 07:21 runtime_log
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas    788480 Jun  3 07:21 result.tar.gz
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas      8669 Jun  3 07:21 runtime_log.err
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas       658 Jun  3 07:21 FKBLDmYuYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO3hKDm8G4Thn.diag
[2025-06-03 07:21:16] -rw-r--r-- 1 boincer umatlas     21206 Jun  3 07:21 stderr.txt
[2025-06-03 07:21:16] HITS file was successfully produced:
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas 189223390 Jun  3 07:20 shared/HITS.pool.root.1
[2025-06-03 07:21:16]  *** Contents of shared directory: ***
[2025-06-03 07:21:16] total 395792
[2025-06-03 07:21:16] -rw-r--r-- 2 boincer umatlas 214740233 Jun  3 06:02 ATLAS.root_0
[2025-06-03 07:21:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 06:02 start_atlas.sh
[2025-06-03 07:21:16] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 06:02 input.tar.gz
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas 189223390 Jun  3 07:20 HITS.pool.root.1
[2025-06-03 07:21:16] -rw------- 1 boincer umatlas    788480 Jun  3 07:21 result.tar.gz
07:21:18 (122844): run_atlas exited; CPU time 35090.712834
07:21:18 (122844): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN