Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:45:24 (586541): wrapper (7.7.26015): starting
22:45:24 (586541): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 22:45:24] Arguments: --nthreads 4
[2025-06-04 22:45:24] Threads: 4
[2025-06-04 22:45:24] Checking for CVMFS
[2025-06-04 22:45:24] No cvmfs_config command found, will try listing directly
[2025-06-04 22:45:24] CVMFS is ok
[2025-06-04 22:45:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:45:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:45:24] Further information can be found at the LHC@home message board.
[2025-06-04 22:45:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:45:24] Checking for apptainer binary...
[2025-06-04 22:45:24] which: no apptainer in ((null))
[2025-06-04 22:45:24] apptainer is not installed, using version from CVMFS
[2025-06-04 22:45:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:45:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-04 22:45:24] apptainer works
[2025-06-04 22:45:24] Set ATHENA_PROC_NUMBER=4
[2025-06-04 22:45:24] Set ATHENA_CORE_NUMBER=4
[2025-06-04 22:45:24] Starting ATLAS job with PandaID=6677516055
[2025-06-04 22:45:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:05:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:05:02] 2025-06-04 23:04:31,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:05:02] 2025-06-04 23:04:33,853 | INFO     | monitor loop #578: job 0:6677516055 is in state 'finished'
[2025-06-05 01:05:02] 2025-06-04 23:04:33,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:05:02] 2025-06-04 23:04:36,358 | INFO     | monitor loop #579: job 0:6677516055 is in state 'finished'
[2025-06-05 01:05:02] 2025-06-04 23:04:36,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:05:02] 2025-06-04 23:04:37,920 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:05:02] 2025-06-04 23:04:37,920 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6677516055/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:05:02] 2025-06-04 23:04:37,921 | INFO     | extracted standard info from prmon json
[2025-06-05 01:05:02] 2025-06-04 23:04:37,921 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:05:02] 2025-06-04 23:04:37,921 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:05:02] 2025-06-04 23:04:37,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:05:02] 2025-06-04 23:04:37,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:05:02] 2025-06-04 23:04:37,925 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:05:02] 2025-06-04 23:04:37,925 | INFO     | sum of square deviations: 779958810.0
[2025-06-05 01:05:02] 2025-06-04 23:04:37,926 | INFO     | sum of deviations: 16174598990.5
[2025-06-05 01:05:02] 2025-06-04 23:04:37,926 | INFO     | mean x: 1749074092.5
[2025-06-05 01:05:02] 2025-06-04 23:04:37,926 | INFO     | mean y: 2306692.169117647
[2025-06-05 01:05:02] 2025-06-04 23:04:37,926 | INFO     | -- intersect: -36269572909.85781
[2025-06-05 01:05:02] 2025-06-04 23:04:37,926 | INFO     | intersect: -36269572909.85781
[2025-06-05 01:05:02] 2025-06-04 23:04:37,927 | INFO     | chi2: 1.5723616467152133
[2025-06-05 01:05:02] 2025-06-04 23:04:37,927 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 01:05:02] 2025-06-04 23:04:37,928 | INFO     | sum of deviations: 15534861154.999998
[2025-06-05 01:05:02] 2025-06-04 23:04:37,928 | INFO     | mean x: 1749073940.0
[2025-06-05 01:05:02] 2025-06-04 23:04:37,928 | INFO     | mean y: 2305514.961832061
[2025-06-05 01:05:02] 2025-06-04 23:04:37,928 | INFO     | -- intersect: -38978296498.323975
[2025-06-05 01:05:02] 2025-06-04 23:04:37,928 | INFO     | intersect: -38978296498.323975
[2025-06-05 01:05:02] 2025-06-04 23:04:37,928 | INFO     | chi2: 1.5746762494392146
[2025-06-05 01:05:02] 2025-06-04 23:04:37,928 | INFO     | current chi2=1.5746762494392146 (change=-0.14720549364942148 %)
[2025-06-05 01:05:02] 2025-06-04 23:04:37,929 | INFO     | right removable region: 130
[2025-06-05 01:05:02] 2025-06-04 23:04:37,929 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 01:05:02] 2025-06-04 23:04:37,929 | INFO     | sum of deviations: -3963679532.999999
[2025-06-05 01:05:02] 2025-06-04 23:04:37,930 | INFO     | mean x: 1749074245.0
[2025-06-05 01:05:02] 2025-06-04 23:04:37,930 | INFO     | mean y: 2343125.106870229
[2025-06-05 01:05:02] 2025-06-04 23:04:37,930 | INFO     | -- intersect: 9948144364.334784
[2025-06-05 01:05:02] 2025-06-04 23:04:37,930 | INFO     | intersect: 9948144364.334784
[2025-06-05 01:05:02] 2025-06-04 23:04:37,930 | INFO     | chi2: 0.01544823093250903
[2025-06-05 01:05:02] 2025-06-04 23:04:37,930 | INFO     | current chi2=0.01544823093250903 (change=99.0175141345643 %)
[2025-06-05 01:05:02] 2025-06-04 23:04:37,931 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 01:05:02] 2025-06-04 23:04:37,931 | INFO     | sum of deviations: -3397436815.5
[2025-06-05 01:05:02] 2025-06-04 23:04:37,931 | INFO     | mean x: 1749074397.5
[2025-06-05 01:05:02] 2025-06-04 23:04:37,931 | INFO     | mean y: 2341970.896825397
[2025-06-05 01:05:02] 2025-06-04 23:04:37,931 | INFO     | -- intersect: 9583035947.355865
[2025-06-05 01:05:02] 2025-06-04 23:04:37,932 | INFO     | intersect: 9583035947.355865
[2025-06-05 01:05:02] 2025-06-04 23:04:37,932 | INFO     | chi2: 0.012651439134611855
[2025-06-05 01:05:02] 2025-06-04 23:04:37,932 | INFO     | current chi2=0.012651439134611855 (change=18.104285274578903 %)
[2025-06-05 01:05:02] 2025-06-04 23:04:37,932 | INFO     | left removable region: 20
[2025-06-05 01:05:02] 2025-06-04 23:04:37,932 | INFO     | sum of square deviations: 412686807.5
[2025-06-05 01:05:02] 2025-06-04 23:04:37,933 | INFO     | sum of deviations: -644010672.0
[2025-06-05 01:05:02] 2025-06-04 23:04:37,933 | INFO     | mean x: 1749074519.5
[2025-06-05 01:05:02] 2025-06-04 23:04:37,933 | INFO     | mean y: 2335598.7818181817
[2025-06-05 01:05:02] 2025-06-04 23:04:37,933 | INFO     | -- intersect: 2731821097.7367907
[2025-06-05 01:05:02] 2025-06-04 23:04:37,933 | INFO     | intersect: 2731821097.7367907
[2025-06-05 01:05:02] 2025-06-04 23:04:37,933 | INFO     | chi2: 0.0053555204946415715
[2025-06-05 01:05:02] 2025-06-04 23:04:37,934 | INFO     | -- intersect: 2731821097.7367907
[2025-06-05 01:05:02] 2025-06-04 23:04:37,934 | INFO     | current memory leak: -1.56 B/s (using 110 data points, chi2=0.01)
[2025-06-05 01:05:02] 2025-06-04 23:04:37,934 | INFO     | ..............................
[2025-06-05 01:05:02] 2025-06-04 23:04:37,934 | INFO     | . Timing measurements:
[2025-06-05 01:05:02] 2025-06-04 23:04:37,934 | INFO     | . get job = 0 s
[2025-06-05 01:05:02] 2025-06-04 23:04:37,934 | INFO     | . initial setup = 1 s
[2025-06-05 01:05:02] 2025-06-04 23:04:37,934 | INFO     | . payload setup = 10 s
[2025-06-05 01:05:02] 2025-06-04 23:04:37,935 | INFO     | . stage-in = 0 s
[2025-06-05 01:05:02] 2025-06-04 23:04:37,935 | INFO     | . payload execution = 8294 s
[2025-06-05 01:05:02] 2025-06-04 23:04:37,935 | INFO     | . stage-out = 0 s
[2025-06-05 01:05:02] 2025-06-04 23:04:37,935 | INFO     | . log creation = 0 s
[2025-06-05 01:05:02] 2025-06-04 23:04:37,935 | INFO     | ..............................
[2025-06-05 01:05:02] 2025-06-04 23:04:38,262 | INFO     | 
[2025-06-05 01:05:02] 2025-06-04 23:04:38,262 | INFO     | job summary report
[2025-06-05 01:05:02] 2025-06-04 23:04:38,262 | INFO     | --------------------------------------------------
[2025-06-05 01:05:02] 2025-06-04 23:04:38,262 | INFO     | PanDA job id: 6677516055
[2025-06-05 01:05:02] 2025-06-04 23:04:38,262 | INFO     | task id: 45006595
[2025-06-05 01:05:02] 2025-06-04 23:04:38,262 | INFO     | errors: (none)
[2025-06-05 01:05:02] 2025-06-04 23:04:38,262 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | pilot state: finished 
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | transexitcode: 0
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | exeerrorcode: 0
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | exeerrordiag: 
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | exitcode: 0
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | exitmsg: OK
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | cpuconsumptiontime: 31380 s
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | nevents: 400
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | neventsw: 0
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | pid: 609294
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | pgrp: 609294
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | corecount: 4
[2025-06-05 01:05:02] 2025-06-04 23:04:38,263 | INFO     | event service: False
[2025-06-05 01:05:02] 2025-06-04 23:04:38,264 | INFO     | sizes: {0: 2397181, 1: 2397380, 8: 2397586, 12: 2397614, 8308: 2425684, 8309: 2425683, 8311: 2434832, 8313: 2434888, 8320: 2435058}
[2025-06-05 01:05:02] 2025-06-04 23:04:38,264 | INFO     | --------------------------------------------------
[2025-06-05 01:05:02] 2025-06-04 23:04:38,264 | INFO     | 
[2025-06-05 01:05:02] 2025-06-04 23:04:38,264 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-05 01:05:02] 2025-06-04 23:04:38,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | job 6677516055 has completed (purged errors)
[2025-06-05 01:05:02] 2025-06-04 23:04:38,297 | INFO     | overall cleanup function is called
[2025-06-05 01:05:02] 2025-06-04 23:04:39,306 | INFO     | --- collectZombieJob: --- 10, [609294]
[2025-06-05 01:05:02] 2025-06-04 23:04:39,306 | INFO     | zombie collector waiting for pid 609294
[2025-06-05 01:05:02] 2025-06-04 23:04:39,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:05:02] 2025-06-04 23:04:39,306 | INFO     | collected zombie processes
[2025-06-05 01:05:02] 2025-06-04 23:04:39,306 | INFO     | will attempt to kill all subprocesses of pid=609294
[2025-06-05 01:05:02] 2025-06-04 23:04:40,028 | INFO     | process IDs to be killed: [609294] (in reverse order)
[2025-06-05 01:05:02] 2025-06-04 23:04:40,270 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:05:02] 2025-06-04 23:04:40,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:05:02] 2025-06-04 23:04:40,298 | INFO     | did not find any defunct processes belonging to 609294
[2025-06-05 01:05:02] 2025-06-04 23:04:40,320 | INFO     | did not find any defunct processes belonging to 609294
[2025-06-05 01:05:02] 2025-06-04 23:04:40,320 | INFO     | ready for new job
[2025-06-05 01:05:02] 2025-06-04 23:04:40,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:05:02] 2025-06-04 23:04:40,322 | INFO     | **************************************
[2025-06-05 01:05:02] 2025-06-04 23:04:40,322 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:05:02] 2025-06-04 23:04:40,322 | INFO     | **************************************
[2025-06-05 01:05:02] 2025-06-04 23:04:40,322 | INFO     | 
[2025-06-05 01:05:02] 2025-06-04 23:04:40,330 | INFO     | architecture information:
[2025-06-05 01:05:02] 2025-06-04 23:04:40,331 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:05:02] 2025-06-04 23:04:40,356 | INFO     | cat /etc/os-release:
[2025-06-05 01:05:02] NAME="CentOS Linux"
[2025-06-05 01:05:02] VERSION="7 (Core)"
[2025-06-05 01:05:02] ID="centos"
[2025-06-05 01:05:02] ID_LIKE="rhel fedora"
[2025-06-05 01:05:02] VERSION_ID="7"
[2025-06-05 01:05:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:05:02] ANSI_COLOR="0;31"
[2025-06-05 01:05:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:05:02] HOME_URL="https://www.centos.org/"
[2025-06-05 01:05:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:05:02] 
[2025-06-05 01:05:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:05:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:05:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:05:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:05:02] 
[2025-06-05 01:05:02] 2025-06-04 23:04:40,356 | INFO     | **************************************
[2025-06-05 01:05:02] 2025-06-04 23:04:40,859 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-05 01:05:02] 2025-06-04 23:04:40,886 | INFO     | sufficient remaining disk space (3256476499968 B)
[2025-06-05 01:05:02] 2025-06-04 23:04:40,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:05:02] 2025-06-04 23:04:40,886 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:05:02] 2025-06-04 23:04:40,886 | INFO     | update_server=False
[2025-06-05 01:05:02] 2025-06-04 23:04:40,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:05:02] 2025-06-04 23:04:40,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:05:02] 2025-06-04 23:04:40,921 | INFO     | all payload control threads have been joined
[2025-06-05 01:05:02] 2025-06-04 23:04:41,042 | INFO     | all data control threads have been joined
[2025-06-05 01:05:02] 2025-06-04 23:04:41,042 | INFO     | all job control threads have been joined
[2025-06-05 01:05:02] 2025-06-04 23:04:41,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:05:02] 2025-06-04 23:04:41,370 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 01:05:02] 2025-06-04 23:04:41,370 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 01:05:02] 2025-06-04 23:04:41,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:05:02] 2025-06-04 23:04:41,371 | INFO     | will abort loop
[2025-06-05 01:05:02] 2025-06-04 23:04:41,779 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:05:02] 2025-06-04 23:04:41,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:05:02] 2025-06-04 23:04:41,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:05:02] 2025-06-04 23:04:41,892 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:41,926 | INFO     | [payload] control thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,045 | INFO     | [job] control thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,047 | INFO     | [data] control thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,107 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,158 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,354 | INFO     | [job] validate thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,361 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,376 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,490 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,615 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:42,750 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:43,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:05:02] 2025-06-04 23:04:43,334 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:44,054 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:44,893 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:51,407 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:05:02] 2025-06-04 23:04:52,412 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:05:02] 2025-06-04 23:04:53,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23018540930880)>', '<ExcThread(monitor, started 23018304669440)>']
[2025-06-05 01:05:02] 2025-06-04 23:04:53,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:05:02] 2025-06-04 23:04:53,837 | INFO     | [monitor] control thread has ended
[2025-06-05 01:05:02] 2025-06-04 23:04:58,030 | INFO     | all workflow threads have been joined
[2025-06-05 01:05:02] 2025-06-04 23:04:58,030 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:05:02] 2025-06-04 23:04:58,030 | INFO     | traces error code: 0
[2025-06-05 01:05:02] 2025-06-04 23:04:58,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:05:02] 2025-06-04 23:04:58,232 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:05:02] 2025-06-04 23:04:58,236 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:05:02] 2025-06-04 23:04:58,241 [wrapper] pilotpid: 594340
[2025-06-05 01:05:02] 2025-06-04 23:04:58,244 [wrapper] Pilot exit status: 0
[2025-06-05 01:05:02] 2025-06-04 23:04:58,259 [wrapper] pandaids: 6677516055
[2025-06-05 01:05:02] 2025-06-04 23:04:58,410 [wrapper] cleanup supervisor_pilot 1096932 594341
[2025-06-05 01:05:02] 2025-06-04 23:04:58,415 [wrapper] Test setup, not cleaning
[2025-06-05 01:05:02] 2025-06-04 23:04:58,419 [wrapper] apfmon messages muted
[2025-06-05 01:05:02] 2025-06-04 23:04:58,423 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:05:02] 2025-06-04 23:04:58,427 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:05:02]  *** Error codes and diagnostics ***
[2025-06-05 01:05:02]     "exeErrorCode": 0,
[2025-06-05 01:05:02]     "exeErrorDiag": "",
[2025-06-05 01:05:02]     "pilotErrorCode": 0,
[2025-06-05 01:05:02]     "pilotErrorDiag": "",
[2025-06-05 01:05:02]  *** Listing of results directory ***
[2025-06-05 01:05:02] total 395572
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc    495897 Jun  3 09:23 pilot3.tar.gz
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc      5111 Jun  3 09:25 queuedata.json
[2025-06-05 01:05:02] -rwx------ 1 boinc boinc     37140 Jun  3 09:25 runpilot2-wrapper.sh
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:05:02] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:45 run_atlas
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:45 job.xml
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc      6687 Jun  4 22:45 init_data.xml
[2025-06-05 01:05:02] -rw-r--r-- 2 boinc boinc 213429226 Jun  4 22:45 EVNT.45006593._000947.pool.root.1
[2025-06-05 01:05:02] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:45 start_atlas.sh
[2025-06-05 01:05:02] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:45 shared
[2025-06-05 01:05:02] -rw-r--r-- 2 boinc boinc    508883 Jun  4 22:45 input.tar.gz
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:45 boinc_lockfile
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc      2524 Jun  4 22:45 pandaJob.out
[2025-06-05 01:05:02] -rw------- 1 boinc boinc    987032 Jun  4 22:45 agis_schedconf.cvmfs.json
[2025-06-05 01:05:02] -rw------- 1 boinc boinc   1598969 Jun  4 22:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:05:02] drwx------ 4 boinc boinc      4096 Jun  4 22:45 pilot3
[2025-06-05 01:05:02] -rw------- 1 boinc boinc 185654474 Jun  5 01:03 HITS.45006595._023683.pool.root.1
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:03 boinc_task_state.xml
[2025-06-05 01:05:02] -rw------- 1 boinc boinc        95 Jun  5 01:04 pilot_heartbeat.json
[2025-06-05 01:05:02] -rw------- 1 boinc boinc      1030 Jun  5 01:04 memory_monitor_summary.json
[2025-06-05 01:05:02] -rw------- 1 boinc boinc    289330 Jun  5 01:04 log.45006595._023683.job.log.tgz.1
[2025-06-05 01:05:02] -rw------- 1 boinc boinc      7701 Jun  5 01:04 heartbeat.json
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:04 wrapper_checkpoint.txt
[2025-06-05 01:05:02] -rw------- 1 boinc boinc      4623 Jun  5 01:04 pilotlog.txt
[2025-06-05 01:05:02] -rw------- 1 boinc boinc    784808 Jun  5 01:04 log.45006595._023683.job.log.1
[2025-06-05 01:05:02] -rw------- 1 boinc boinc       357 Jun  5 01:04 output.list
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:04 runtime_log
[2025-06-05 01:05:02] -rw------- 1 boinc boinc   1095680 Jun  5 01:04 result.tar.gz
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc      9040 Jun  5 01:04 runtime_log.err
[2025-06-05 01:05:02] -rw------- 1 boinc boinc       663 Jun  5 01:04 aM5KDmrCbg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmklXKDmygzG4n.diag
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:05 boinc_mmap_file
[2025-06-05 01:05:02] -rw-r--r-- 1 boinc boinc     20925 Jun  5 01:05 stderr.txt
[2025-06-05 01:05:02] HITS file was successfully produced:
[2025-06-05 01:05:02] -rw------- 1 boinc boinc 185654474 Jun  5 01:03 shared/HITS.pool.root.1
[2025-06-05 01:05:02]  *** Contents of shared directory: ***
[2025-06-05 01:05:02] total 391328
[2025-06-05 01:05:02] -rw-r--r-- 2 boinc boinc 213429226 Jun  4 22:45 ATLAS.root_0
[2025-06-05 01:05:02] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:45 start_atlas.sh
[2025-06-05 01:05:02] -rw-r--r-- 2 boinc boinc    508883 Jun  4 22:45 input.tar.gz
[2025-06-05 01:05:02] -rw------- 1 boinc boinc 185654474 Jun  5 01:03 HITS.pool.root.1
[2025-06-05 01:05:02] -rw------- 1 boinc boinc   1095680 Jun  5 01:04 result.tar.gz
01:05:03 (586541): run_atlas exited; CPU time 31828.752033
01:05:03 (586541): called boinc_finish(0)

</stderr_txt>
]]>

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