Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:40:31 (31017): wrapper (7.7.26015): starting
17:40:31 (31017): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:40:31] Arguments: --nthreads 8
[2025-06-03 17:40:31] Threads: 8
[2025-06-03 17:40:31] Checking for CVMFS
[2025-06-03 17:40:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:40:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:40:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:40:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:40:33] 2.11.2.0 17186 32126 102272 146746 0 104 16456338 25165825 3888 130560 0 17017000 99.859 18175598 2025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:40:33] CVMFS is ok
[2025-06-03 17:40:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:40:33] Checking for apptainer binary...
[2025-06-03 17:40:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:40:33] Running /usr/bin/apptainer --version
[2025-06-03 17:40:34] apptainer version 1.3.2-1.el7
[2025-06-03 17:40:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:40:46] cg-vwn311.simple-grid.lan
[2025-06-03 17:40:46] apptainer works
[2025-06-03 17:40:46] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:40:46] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:40:46] Starting ATLAS job with PandaID=6677548962
[2025-06-03 17:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:45:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:45:46] 2025-06-03 19:45:33,665 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6677548962/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,666 | INFO     | extracted standard info from prmon json
[2025-06-03 21:45:46] 2025-06-03 19:45:33,666 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:45:46] 2025-06-03 19:45:33,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:45:46] 2025-06-03 19:45:33,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:45:46] 2025-06-03 19:45:33,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:45:46] 2025-06-03 19:45:33,672 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:45:46] 2025-06-03 19:45:33,674 | INFO     | sum of square deviations: 3772712597.5
[2025-06-03 21:45:46] 2025-06-03 19:45:33,676 | INFO     | sum of deviations: 35236336978.50003
[2025-06-03 21:45:46] 2025-06-03 19:45:33,676 | INFO     | mean x: 1748972882.5
[2025-06-03 21:45:46] 2025-06-03 19:45:33,676 | INFO     | mean y: 2480637.3260869565
[2025-06-03 21:45:46] 2025-06-03 19:45:33,676 | INFO     | -- intersect: -16332555828.17784
[2025-06-03 21:45:46] 2025-06-03 19:45:33,676 | INFO     | intersect: -16332555828.17784
[2025-06-03 21:45:46] 2025-06-03 19:45:33,677 | INFO     | chi2: 4.0484927298357025
[2025-06-03 21:45:46] 2025-06-03 19:45:33,677 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,679 | INFO     | sum of deviations: 34338281832.999992
[2025-06-03 21:45:46] 2025-06-03 19:45:33,679 | INFO     | mean x: 1748972730.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,680 | INFO     | mean y: 2480068.3866666667
[2025-06-03 21:45:46] 2025-06-03 19:45:33,680 | INFO     | -- intersect: -17001249892.24027
[2025-06-03 21:45:46] 2025-06-03 19:45:33,680 | INFO     | intersect: -17001249892.24027
[2025-06-03 21:45:46] 2025-06-03 19:45:33,680 | INFO     | chi2: 4.052485435398583
[2025-06-03 21:45:46] 2025-06-03 19:45:33,680 | INFO     | current chi2=4.052485435398583 (change=-0.09862202625327111 %)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,680 | INFO     | right removable region: 224
[2025-06-03 21:45:46] 2025-06-03 19:45:33,681 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,683 | INFO     | sum of deviations: -35266256533.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,683 | INFO     | mean x: 1748973035.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,683 | INFO     | mean y: 2525185.1866666665
[2025-06-03 21:45:46] 2025-06-03 19:45:33,683 | INFO     | -- intersect: 17465775393.769672
[2025-06-03 21:45:46] 2025-06-03 19:45:33,683 | INFO     | intersect: 17465775393.769672
[2025-06-03 21:45:46] 2025-06-03 19:45:33,684 | INFO     | chi2: 0.3125098851712191
[2025-06-03 21:45:46] 2025-06-03 19:45:33,684 | INFO     | current chi2=0.3125098851712191 (change=92.28083373181947 %)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,684 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,686 | INFO     | sum of deviations: -43094501365.5
[2025-06-03 21:45:46] 2025-06-03 19:45:33,686 | INFO     | mean x: 1748973187.5
[2025-06-03 21:45:46] 2025-06-03 19:45:33,687 | INFO     | mean y: 2530302.768181818
[2025-06-03 21:45:46] 2025-06-03 19:45:33,687 | INFO     | -- intersect: 22830512136.279877
[2025-06-03 21:45:46] 2025-06-03 19:45:33,687 | INFO     | intersect: 22830512136.279877
[2025-06-03 21:45:46] 2025-06-03 19:45:33,687 | INFO     | chi2: 0.19863159260487645
[2025-06-03 21:45:46] 2025-06-03 19:45:33,687 | INFO     | current chi2=0.19863159260487645 (change=36.439900934317826 %)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,688 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,690 | INFO     | sum of deviations: -37077842889.99999
[2025-06-03 21:45:46] 2025-06-03 19:45:33,690 | INFO     | mean x: 1748973340.0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,690 | INFO     | mean y: 2526128.9441860467
[2025-06-03 21:45:46] 2025-06-03 19:45:33,690 | INFO     | -- intersect: 21045796780.274765
[2025-06-03 21:45:46] 2025-06-03 19:45:33,690 | INFO     | intersect: 21045796780.274765
[2025-06-03 21:45:46] 2025-06-03 19:45:33,691 | INFO     | chi2: 0.1919205014502005
[2025-06-03 21:45:46] 2025-06-03 19:45:33,691 | INFO     | current chi2=0.1919205014502005 (change=3.378662511167512 %)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,691 | INFO     | left removable region: 30
[2025-06-03 21:45:46] 2025-06-03 19:45:33,691 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 21:45:46] 2025-06-03 19:45:33,693 | INFO     | sum of deviations: -14925264761.5
[2025-06-03 21:45:46] 2025-06-03 19:45:33,693 | INFO     | mean x: 1748973614.5
[2025-06-03 21:45:46] 2025-06-03 19:45:33,693 | INFO     | mean y: 2509391.31443299
[2025-06-03 21:45:46] 2025-06-03 19:45:33,693 | INFO     | -- intersect: 11532613461.95231
[2025-06-03 21:45:46] 2025-06-03 19:45:33,693 | INFO     | intersect: 11532613461.95231
[2025-06-03 21:45:46] 2025-06-03 19:45:33,694 | INFO     | chi2: 0.12470511012423428
[2025-06-03 21:45:46] 2025-06-03 19:45:33,694 | INFO     | -- intersect: 11532613461.95231
[2025-06-03 21:45:46] 2025-06-03 19:45:33,694 | INFO     | current memory leak: -6.59 B/s (using 194 data points, chi2=0.12)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,695 | INFO     | ..............................
[2025-06-03 21:45:46] 2025-06-03 19:45:33,695 | INFO     | . Timing measurements:
[2025-06-03 21:45:46] 2025-06-03 19:45:33,695 | INFO     | . get job = 0 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,695 | INFO     | . initial setup = 7 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,695 | INFO     | . payload setup = 151 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,696 | INFO     | . stage-in = 0 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,696 | INFO     | . payload execution = 14157 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,696 | INFO     | . stage-out = 1 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,696 | INFO     | . log creation = 0 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,696 | INFO     | ..............................
[2025-06-03 21:45:46] 2025-06-03 19:45:33,822 | INFO     | 
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | job summary report
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | --------------------------------------------------
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | PanDA job id: 6677548962
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | task id: 45006595
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | errors: (none)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | pilot state: finished 
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | transexitcode: 0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,823 | INFO     | exeerrorcode: 0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | exeerrordiag: 
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | exitcode: 0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | exitmsg: OK
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | cpuconsumptiontime: 51891 s
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | nevents: 400
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | neventsw: 0
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | pid: 20907
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | pgrp: 20907
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | corecount: 8
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | event service: False
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 77: 2405508, 88: 2405770, 98: 2405798, 14312: 2435901
[2025-06-03 21:45:46] 2025-06-03 19:45:33,824 | INFO     | --------------------------------------------------
[2025-06-03 21:45:46] 2025-06-03 19:45:33,825 | INFO     | 
[2025-06-03 21:45:46] 2025-06-03 19:45:33,825 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-03 21:45:46] 2025-06-03 19:45:33,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:45:46] 2025-06-03 19:45:33,907 | INFO     | job 6677548962 has completed (purged errors)
[2025-06-03 21:45:46] 2025-06-03 19:45:33,907 | INFO     | overall cleanup function is called
[2025-06-03 21:45:46] 2025-06-03 19:45:34,916 | INFO     | --- collectZombieJob: --- 10, [20907]
[2025-06-03 21:45:46] 2025-06-03 19:45:34,916 | INFO     | zombie collector waiting for pid 20907
[2025-06-03 21:45:46] 2025-06-03 19:45:34,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:45:46] 2025-06-03 19:45:34,917 | INFO     | collected zombie processes
[2025-06-03 21:45:46] 2025-06-03 19:45:34,917 | INFO     | will attempt to kill all subprocesses of pid=20907
[2025-06-03 21:45:46] 2025-06-03 19:45:35,024 | INFO     | process IDs to be killed: [20907] (in reverse order)
[2025-06-03 21:45:46] 2025-06-03 19:45:35,101 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:45:46] 2025-06-03 19:45:35,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:45:46] 2025-06-03 19:45:35,105 | INFO     | did not find any defunct processes belonging to 20907
[2025-06-03 21:45:46] 2025-06-03 19:45:35,108 | INFO     | did not find any defunct processes belonging to 20907
[2025-06-03 21:45:46] 2025-06-03 19:45:35,109 | INFO     | ready for new job
[2025-06-03 21:45:46] 2025-06-03 19:45:35,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:45:46] 2025-06-03 19:45:35,112 | INFO     | **************************************
[2025-06-03 21:45:46] 2025-06-03 19:45:35,112 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:45:46] 2025-06-03 19:45:35,112 | INFO     | **************************************
[2025-06-03 21:45:46] 2025-06-03 19:45:35,112 | INFO     | 
[2025-06-03 21:45:46] 2025-06-03 19:45:35,113 | INFO     | pilot is running in a VM
[2025-06-03 21:45:46] 2025-06-03 19:45:35,113 | INFO     | architecture information:
[2025-06-03 21:45:46] 2025-06-03 19:45:35,115 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:45:46] 2025-06-03 19:45:35,145 | INFO     | cat /etc/os-release:
[2025-06-03 21:45:46] NAME="CentOS Linux"
[2025-06-03 21:45:46] VERSION="7 (Core)"
[2025-06-03 21:45:46] ID="centos"
[2025-06-03 21:45:46] ID_LIKE="rhel fedora"
[2025-06-03 21:45:46] VERSION_ID="7"
[2025-06-03 21:45:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:45:46] ANSI_COLOR="0;31"
[2025-06-03 21:45:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:45:46] HOME_URL="https://www.centos.org/"
[2025-06-03 21:45:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:45:46] 
[2025-06-03 21:45:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:45:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:45:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:45:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:45:46] 
[2025-06-03 21:45:46] 2025-06-03 19:45:35,145 | INFO     | **************************************
[2025-06-03 21:45:46] 2025-06-03 19:45:35,649 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-03 21:45:46] 2025-06-03 19:45:35,676 | INFO     | sufficient remaining disk space (496905486336 B)
[2025-06-03 21:45:46] 2025-06-03 19:45:35,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:45:46] 2025-06-03 19:45:35,677 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:45:46] 2025-06-03 19:45:35,678 | INFO     | update_server=False
[2025-06-03 21:45:46] 2025-06-03 19:45:35,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:45:46] 2025-06-03 19:45:35,678 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:45:46] 2025-06-03 19:45:35,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:45:46] 2025-06-03 19:45:35,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:45:46] 2025-06-03 19:45:35,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:45:46] 2025-06-03 19:45:35,708 | INFO     | aborting loop
[2025-06-03 21:45:46] 2025-06-03 19:45:35,920 | INFO     | all job control threads have been joined
[2025-06-03 21:45:46] 2025-06-03 19:45:36,207 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:45:46] 2025-06-03 19:45:36,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:45:46] 2025-06-03 19:45:36,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:45:46] 2025-06-03 19:45:36,419 | INFO     | all data control threads have been joined
[2025-06-03 21:45:46] 2025-06-03 19:45:36,542 | INFO     | all payload control threads have been joined
[2025-06-03 21:45:46] 2025-06-03 19:45:36,683 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:36,684 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:36,712 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:36,926 | INFO     | [job] control thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:36,976 | INFO     | [job] validate thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,237 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,310 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,425 | INFO     | [data] control thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,426 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,548 | INFO     | [payload] control thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,683 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:37,995 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:38,004 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:38,019 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:39,686 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:45:46] 2025-06-03 19:45:41,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007843710784)>', '<ExcThread(monitor, started 140007251625728)>']
[2025-06-03 21:45:46] 2025-06-03 19:45:42,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:45:46] 2025-06-03 19:45:42,236 | INFO     | [monitor] control thread has ended
[2025-06-03 21:45:46] 2025-06-03 19:45:46,381 | INFO     | all workflow threads have been joined
[2025-06-03 21:45:46] 2025-06-03 19:45:46,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:45:46] 2025-06-03 19:45:46,382 | INFO     | traces error code: 0
[2025-06-03 21:45:46] 2025-06-03 19:45:46,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:45:46] 2025-06-03 19:45:46,597 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:45:46] 2025-06-03 19:45:46,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:45:46] 2025-06-03 19:45:46,644 [wrapper] pilotpid: 8297
[2025-06-03 21:45:46] 2025-06-03 19:45:46,655 [wrapper] Pilot exit status: 0
[2025-06-03 21:45:46] 2025-06-03 19:45:46,691 [wrapper] pandaids: 6677548962
[2025-06-03 21:45:46] 2025-06-03 19:45:46,731 [wrapper] cleanup supervisor_pilot 20352 8298
[2025-06-03 21:45:46] 2025-06-03 19:45:46,743 [wrapper] Test setup, not cleaning
[2025-06-03 21:45:46] 2025-06-03 19:45:46,751 [wrapper] apfmon messages muted
[2025-06-03 21:45:46] 2025-06-03 19:45:46,754 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:45:46] 2025-06-03 19:45:46,757 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:45:46]  *** Error codes and diagnostics ***
[2025-06-03 21:45:46]     "exeErrorCode": 0,
[2025-06-03 21:45:46]     "exeErrorDiag": "",
[2025-06-03 21:45:46]     "pilotErrorCode": 0,
[2025-06-03 21:45:46]     "pilotErrorDiag": "",
[2025-06-03 21:45:46]  *** Listing of results directory ***
[2025-06-03 21:45:46] total 401396
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:43 pilot3.tar.gz
[2025-06-03 21:45:46] -rwx------. 1 boinc boinc     37140 Jun  3 10:58 runpilot2-wrapper.sh
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc      5111 Jun  3 10:58 queuedata.json
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:45:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:40 run_atlas
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:40 job.xml
[2025-06-03 21:45:46] -rw-r--r--. 2 boinc boinc 216600420 Jun  3 17:40 EVNT.45006593._001059.pool.root.1
[2025-06-03 21:45:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:40 start_atlas.sh
[2025-06-03 21:45:46] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:40 shared
[2025-06-03 21:45:46] -rw-r--r--. 2 boinc boinc    508881 Jun  3 17:40 input.tar.gz
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc      6390 Jun  3 17:40 init_data.xml
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:40 boinc_lockfile
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc      2525 Jun  3 17:40 pandaJob.out
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc    982716 Jun  3 17:43 agis_schedconf.cvmfs.json
[2025-06-03 21:45:46] drwx------. 4 boinc boinc      4096 Jun  3 17:43 pilot3
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc 187341041 Jun  3 21:44 HITS.45006595._026484.pool.root.1
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc       530 Jun  3 21:44 boinc_task_state.xml
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc      1015 Jun  3 21:45 memory_monitor_summary.json
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc   1603667 Jun  3 21:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc    392578 Jun  3 21:45 log.45006595._026484.job.log.tgz.1
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc        95 Jun  3 21:45 pilot_heartbeat.json
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc      7689 Jun  3 21:45 heartbeat.json
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:45 boinc_mmap_file
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:45 wrapper_checkpoint.txt
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc      4416 Jun  3 21:45 pilotlog.txt
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc   1242979 Jun  3 21:45 log.45006595._026484.job.log.1
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc       357 Jun  3 21:45 output.list
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:45 runtime_log
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc   1658880 Jun  3 21:45 result.tar.gz
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc      8659 Jun  3 21:45 runtime_log.err
[2025-06-03 21:45:46] -rw-------. 1 boinc boinc       656 Jun  3 21:45 RRQODmnecg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh4iKDm4Akawm.diag
[2025-06-03 21:45:46] -rw-r--r--. 1 boinc boinc     20531 Jun  3 21:45 stderr.txt
[2025-06-03 21:45:47] HITS file was successfully produced:
[2025-06-03 21:45:47] -rw-------. 1 boinc boinc 187341041 Jun  3 21:44 shared/HITS.pool.root.1
[2025-06-03 21:45:47]  *** Contents of shared directory: ***
[2025-06-03 21:45:47] total 396612
[2025-06-03 21:45:47] -rw-r--r--. 2 boinc boinc 216600420 Jun  3 17:40 ATLAS.root_0
[2025-06-03 21:45:47] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:40 start_atlas.sh
[2025-06-03 21:45:47] -rw-r--r--. 2 boinc boinc    508881 Jun  3 17:40 input.tar.gz
[2025-06-03 21:45:47] -rw-------. 1 boinc boinc 187341041 Jun  3 21:44 HITS.pool.root.1
[2025-06-03 21:45:47] -rw-------. 1 boinc boinc   1658880 Jun  3 21:45 result.tar.gz
21:45:48 (31017): run_atlas exited; CPU time 52089.578682
21:45:48 (31017): called boinc_finish(0)

</stderr_txt>
]]>

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