Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:04:38 (31780): wrapper (7.7.26015): starting
23:04:38 (31780): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:04:38] Arguments: --nthreads 8
[2025-06-03 23:04:38] Threads: 8
[2025-06-03 23:04:38] Checking for CVMFS
[2025-06-03 23:04:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:04:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:04:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:04:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:04:41] 2.11.2.0 16537 32284 88352 146755 1 69 25031000 25165825 4281 130560 0 16296409 99.773 19300801 2116 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 23:04:41] CVMFS is ok
[2025-06-03 23:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:04:41] Checking for apptainer binary...
[2025-06-03 23:04:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:04:41] Running /usr/bin/apptainer --version
[2025-06-03 23:04:41] apptainer version 1.3.2-1.el7
[2025-06-03 23:04:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:15:37] cg-vwn365.simple-grid.lan
[2025-06-03 23:15:37] apptainer works
[2025-06-03 23:15:37] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:15:37] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:15:37] Starting ATLAS job with PandaID=6677516248
[2025-06-03 23:15:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:36:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:36:32] 2025-06-04 01:16:41,614 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6677516248/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:36:32] 2025-06-04 01:16:41,615 | INFO     | extracted standard info from prmon json
[2025-06-04 03:36:32] 2025-06-04 01:16:41,615 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:36:32] 2025-06-04 01:16:41,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:36:32] 2025-06-04 01:16:41,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:36:32] 2025-06-04 01:16:41,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:36:32] 2025-06-04 01:16:41,628 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:36:32] 2025-06-04 01:16:41,629 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,631 | INFO     | sum of deviations: 52424041018.500015
[2025-06-04 03:36:32] 2025-06-04 01:16:41,631 | INFO     | mean x: 1748992842.5
[2025-06-04 03:36:32] 2025-06-04 01:16:41,631 | INFO     | mean y: 2447628.6741071427
[2025-06-04 03:36:32] 2025-06-04 01:16:41,631 | INFO     | -- intersect: -26306574333.14429
[2025-06-04 03:36:32] 2025-06-04 01:16:41,631 | INFO     | intersect: -26306574333.14429
[2025-06-04 03:36:32] 2025-06-04 01:16:41,632 | INFO     | chi2: 5.607083302843686
[2025-06-04 03:36:32] 2025-06-04 01:16:41,632 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,634 | INFO     | sum of deviations: 66112262013.99998
[2025-06-04 03:36:32] 2025-06-04 01:16:41,634 | INFO     | mean x: 1748992690.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,635 | INFO     | mean y: 2456593.926940639
[2025-06-04 03:36:32] 2025-06-04 01:16:41,635 | INFO     | -- intersect: -35500808708.42629
[2025-06-04 03:36:32] 2025-06-04 01:16:41,635 | INFO     | intersect: -35500808708.42629
[2025-06-04 03:36:32] 2025-06-04 01:16:41,635 | INFO     | chi2: 4.8605921284496745
[2025-06-04 03:36:32] 2025-06-04 01:16:41,635 | INFO     | current chi2=4.8605921284496745 (change=13.313359800012634 %)
[2025-06-04 03:36:32] 2025-06-04 01:16:41,635 | INFO     | right removable region: 218
[2025-06-04 03:36:32] 2025-06-04 01:16:41,636 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,638 | INFO     | sum of deviations: -20367131034.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,638 | INFO     | mean x: 1748992995.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,638 | INFO     | mean y: 2496191.2374429223
[2025-06-04 03:36:32] 2025-06-04 01:16:41,638 | INFO     | -- intersect: 10939949556.443626
[2025-06-04 03:36:32] 2025-06-04 01:16:41,638 | INFO     | intersect: 10939949556.443626
[2025-06-04 03:36:32] 2025-06-04 01:16:41,639 | INFO     | chi2: 1.4185938494504868
[2025-06-04 03:36:32] 2025-06-04 01:16:41,639 | INFO     | current chi2=1.4185938494504868 (change=74.69996836446083 %)
[2025-06-04 03:36:32] 2025-06-04 01:16:41,639 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 03:36:32] 2025-06-04 01:16:41,641 | INFO     | sum of deviations: -38577648822.5
[2025-06-04 03:36:32] 2025-06-04 01:16:41,641 | INFO     | mean x: 1748993147.5
[2025-06-04 03:36:32] 2025-06-04 01:16:41,641 | INFO     | mean y: 2508805.1261682245
[2025-06-04 03:36:32] 2025-06-04 01:16:41,642 | INFO     | -- intersect: 22205608173.337204
[2025-06-04 03:36:32] 2025-06-04 01:16:41,642 | INFO     | intersect: 22205608173.337204
[2025-06-04 03:36:32] 2025-06-04 01:16:41,642 | INFO     | chi2: 0.9733009304459191
[2025-06-04 03:36:32] 2025-06-04 01:16:41,642 | INFO     | current chi2=0.9733009304459191 (change=31.3897398594431 %)
[2025-06-04 03:36:32] 2025-06-04 01:16:41,643 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,644 | INFO     | sum of deviations: -33873121209.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,645 | INFO     | mean x: 1748993300.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,645 | INFO     | mean y: 2505327.5263157897
[2025-06-04 03:36:32] 2025-06-04 01:16:41,645 | INFO     | -- intersect: 20930905081.151417
[2025-06-04 03:36:32] 2025-06-04 01:16:41,648 | INFO     | intersect: 20930905081.151417
[2025-06-04 03:36:32] 2025-06-04 01:16:41,649 | INFO     | chi2: 0.9575126666876023
[2025-06-04 03:36:32] 2025-06-04 01:16:41,649 | INFO     | current chi2=0.9575126666876023 (change=1.6221358949162274 %)
[2025-06-04 03:36:32] 2025-06-04 01:16:41,649 | INFO     | left removable region: 30
[2025-06-04 03:36:32] 2025-06-04 01:16:41,650 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 03:36:32] 2025-06-04 01:16:41,651 | INFO     | sum of deviations: 3554099760.499999
[2025-06-04 03:36:32] 2025-06-04 01:16:41,652 | INFO     | mean x: 1748993574.5
[2025-06-04 03:36:32] 2025-06-04 01:16:41,652 | INFO     | mean y: 2496870.813829787
[2025-06-04 03:36:32] 2025-06-04 01:16:41,652 | INFO     | -- intersect: -3014522815.00197
[2025-06-04 03:36:32] 2025-06-04 01:16:41,652 | INFO     | intersect: -3014522815.00197
[2025-06-04 03:36:32] 2025-06-04 01:16:41,652 | INFO     | chi2: 0.013694165765771458
[2025-06-04 03:36:32] 2025-06-04 01:16:41,653 | INFO     | -- intersect: -3014522815.00197
[2025-06-04 03:36:32] 2025-06-04 01:16:41,653 | INFO     | current memory leak: 1.73 B/s (using 188 data points, chi2=0.01)
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | ..............................
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | . Timing measurements:
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | . get job = 0 s
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | . initial setup = 10 s
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | . payload setup = 187 s
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | . stage-in = 0 s
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | . payload execution = 13812 s
[2025-06-04 03:36:32] 2025-06-04 01:16:41,654 | INFO     | . stage-out = 3 s
[2025-06-04 03:36:32] 2025-06-04 01:16:41,655 | INFO     | . log creation = 1 s
[2025-06-04 03:36:32] 2025-06-04 01:16:41,655 | INFO     | ..............................
[2025-06-04 03:36:32] 2025-06-04 01:16:42,008 | INFO     | 
[2025-06-04 03:36:32] 2025-06-04 01:16:42,008 | INFO     | job summary report
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | --------------------------------------------------
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | PanDA job id: 6677516248
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | task id: 45006595
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | errors: (none)
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | pilot state: finished 
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | transexitcode: 0
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | exeerrorcode: 0
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | exeerrordiag: 
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | exitcode: 0
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | exitmsg: OK
[2025-06-04 03:36:32] 2025-06-04 01:16:42,009 | INFO     | cpuconsumptiontime: 50005 s
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | nevents: 400
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | neventsw: 0
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | pid: 18181
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | pgrp: 18181
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | corecount: 8
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | event service: False
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405211, 23: 2405239, 33: 2405267, 44: 2405323, 55: 2405479, 65: 2405507, 76: 2405535, 87: 2357690, 88: 2405825, 98: 2406133, 1
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | --------------------------------------------------
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | 
[2025-06-04 03:36:32] 2025-06-04 01:16:42,010 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 03:36:32] 2025-06-04 01:16:42,445 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,445 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:36:32] 2025-06-04 01:16:42,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:36:32] 2025-06-04 01:16:42,447 | INFO     | job 6677516248 has completed (purged errors)
[2025-06-04 03:36:32] 2025-06-04 01:16:42,447 | INFO     | overall cleanup function is called
[2025-06-04 03:36:32] 2025-06-04 01:16:43,456 | INFO     | --- collectZombieJob: --- 10, [18181]
[2025-06-04 03:36:32] 2025-06-04 01:16:43,456 | INFO     | zombie collector waiting for pid 18181
[2025-06-04 03:36:32] 2025-06-04 01:16:43,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:36:32] 2025-06-04 01:16:43,457 | INFO     | collected zombie processes
[2025-06-04 03:36:32] 2025-06-04 01:16:43,457 | INFO     | will attempt to kill all subprocesses of pid=18181
[2025-06-04 03:36:32] 2025-06-04 01:16:43,575 | INFO     | process IDs to be killed: [18181] (in reverse order)
[2025-06-04 03:36:32] 2025-06-04 01:16:44,301 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:36:32] 2025-06-04 01:16:44,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:36:32] 2025-06-04 01:16:44,305 | INFO     | did not find any defunct processes belonging to 18181
[2025-06-04 03:36:32] 2025-06-04 01:16:44,316 | INFO     | did not find any defunct processes belonging to 18181
[2025-06-04 03:36:32] 2025-06-04 01:16:44,316 | INFO     | ready for new job
[2025-06-04 03:36:32] 2025-06-04 01:16:44,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:36:32] 2025-06-04 01:16:44,318 | INFO     | **************************************
[2025-06-04 03:36:32] 2025-06-04 01:16:44,319 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:36:32] 2025-06-04 01:16:44,319 | INFO     | **************************************
[2025-06-04 03:36:32] 2025-06-04 01:16:44,319 | INFO     | 
[2025-06-04 03:36:32] 2025-06-04 01:16:44,319 | INFO     | pilot is running in a VM
[2025-06-04 03:36:32] 2025-06-04 01:16:44,319 | INFO     | architecture information:
[2025-06-04 03:36:32] 2025-06-04 01:16:44,328 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:36:32] 2025-06-04 01:16:44,492 | INFO     | cat /etc/os-release:
[2025-06-04 03:36:32] NAME="CentOS Linux"
[2025-06-04 03:36:32] VERSION="7 (Core)"
[2025-06-04 03:36:32] ID="centos"
[2025-06-04 03:36:32] ID_LIKE="rhel fedora"
[2025-06-04 03:36:32] VERSION_ID="7"
[2025-06-04 03:36:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:36:32] ANSI_COLOR="0;31"
[2025-06-04 03:36:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:36:32] HOME_URL="https://www.centos.org/"
[2025-06-04 03:36:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:36:32] 
[2025-06-04 03:36:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:36:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:36:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:36:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:36:32] 
[2025-06-04 03:36:32] 2025-06-04 01:16:44,492 | INFO     | **************************************
[2025-06-04 03:36:32] 2025-06-04 01:16:44,995 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 03:36:32] 2025-06-04 01:16:45,239 | INFO     | sufficient remaining disk space (496555261952 B)
[2025-06-04 03:36:32] 2025-06-04 01:16:45,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:36:32] 2025-06-04 01:16:45,239 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:36:32] 2025-06-04 01:16:45,240 | INFO     | update_server=False
[2025-06-04 03:36:32] 2025-06-04 01:16:45,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:36:32] 2025-06-04 01:16:45,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:36:32] 2025-06-04 01:16:45,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:36:32] 2025-06-04 01:16:45,469 | INFO     | aborting loop
[2025-06-04 03:36:32] 2025-06-04 01:16:45,725 | INFO     | all payload control threads have been joined
[2025-06-04 03:36:32] 2025-06-04 01:16:45,965 | INFO     | all job control threads have been joined
[2025-06-04 03:36:32] 2025-06-04 01:16:46,041 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:36:32] 2025-06-04 01:16:46,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:36:32] 2025-06-04 01:16:46,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:36:32] 2025-06-04 01:16:46,173 | INFO     | all data control threads have been joined
[2025-06-04 03:36:32] 2025-06-04 01:16:46,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:36:32] 2025-06-04 01:16:46,248 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:46,352 | INFO     | [job] validate thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:46,474 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:46,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:46,731 | INFO     | [payload] control thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:46,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:36:32] 2025-06-04 01:16:46,971 | INFO     | [job] control thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,051 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,075 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,179 | INFO     | [data] control thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,234 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,251 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,418 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,585 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,843 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:47,844 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:50,187 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:36:32] 2025-06-04 01:16:52,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138446886720)>', '<ExcThread(monitor, started 140137711257344)>']
[2025-06-04 03:36:32] 2025-06-04 01:16:53,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:36:32] 2025-06-04 01:16:53,084 | INFO     | [monitor] control thread has ended
[2025-06-04 03:36:32] 2025-06-04 01:16:57,192 | INFO     | all workflow threads have been joined
[2025-06-04 03:36:32] 2025-06-04 01:16:57,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:36:32] 2025-06-04 01:16:57,193 | INFO     | traces error code: 0
[2025-06-04 03:36:32] 2025-06-04 01:16:57,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:36:32] 2025-06-04 01:16:57,532 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:36:32] 2025-06-04 01:16:57,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:36:32] 2025-06-04 01:16:57,608 [wrapper] pilotpid: 11506
[2025-06-04 03:36:32] 2025-06-04 01:16:57,685 [wrapper] Pilot exit status: 0
[2025-06-04 03:36:32] 2025-06-04 01:16:58,119 [wrapper] pandaids: 6677516248
[2025-06-04 03:36:32] 2025-06-04 01:16:59,006 [wrapper] cleanup supervisor_pilot  2729 11507
[2025-06-04 03:36:32] 2025-06-04 01:16:59,151 [wrapper] Test setup, not cleaning
[2025-06-04 03:36:32] 2025-06-04 01:16:59,242 [wrapper] apfmon messages muted
[2025-06-04 03:36:32] 2025-06-04 01:16:59,327 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:36:32] 2025-06-04 01:16:59,407 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:36:32]  *** Error codes and diagnostics ***
[2025-06-04 03:36:32]     "exeErrorCode": 0,
[2025-06-04 03:36:32]     "exeErrorDiag": "",
[2025-06-04 03:36:32]     "pilotErrorCode": 0,
[2025-06-04 03:36:32]     "pilotErrorDiag": "",
[2025-06-04 03:36:32]  *** Listing of results directory ***
[2025-06-04 03:36:32] total 398744
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc    495897 Jun  3 09:23 pilot3.tar.gz
[2025-06-04 03:36:32] -rwx------. 1 boinc boinc     37140 Jun  3 09:31 runpilot2-wrapper.sh
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc      5111 Jun  3 09:31 queuedata.json
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc       100 Jun  3 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:36:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 23:04 run_atlas
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc       105 Jun  3 23:04 job.xml
[2025-06-04 03:36:32] -rw-r--r--. 2 boinc boinc 217278476 Jun  3 23:04 EVNT.45006593._000955.pool.root.1
[2025-06-04 03:36:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:04 start_atlas.sh
[2025-06-04 03:36:32] drwxrwx--x. 2 boinc boinc        68 Jun  3 23:04 shared
[2025-06-04 03:36:32] -rw-r--r--. 2 boinc boinc    508878 Jun  3 23:04 input.tar.gz
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc      6392 Jun  3 23:04 init_data.xml
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc         0 Jun  3 23:04 boinc_lockfile
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc      2524 Jun  3 23:15 pandaJob.out
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc    986853 Jun  3 23:18 agis_schedconf.cvmfs.json
[2025-06-04 03:36:32] drwx------. 4 boinc boinc      4096 Jun  3 23:18 pilot3
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc 183999992 Jun  4 03:13 HITS.45006595._023876.pool.root.1
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc       531 Jun  4 03:14 boinc_task_state.xml
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc      1017 Jun  4 03:15 memory_monitor_summary.json
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc   1603667 Jun  4 03:15 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc    386391 Jun  4 03:15 log.45006595._023876.job.log.tgz.1
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc        95 Jun  4 03:16 pilot_heartbeat.json
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc      7689 Jun  4 03:16 heartbeat.json
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc      4417 Jun  4 03:16 pilotlog.txt
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc   1218336 Jun  4 03:16 log.45006595._023876.job.log.1
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc       357 Jun  4 03:17 output.list
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc       620 Jun  4 03:17 runtime_log
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc   1628160 Jun  4 03:17 result.tar.gz
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc      8673 Jun  4 03:17 runtime_log.err
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc       657 Jun  4 03:17 0XGLDmjIbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzgiKDmdhmRan.diag
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc      8192 Jun  4 03:36 boinc_mmap_file
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc        28 Jun  4 03:36 wrapper_checkpoint.txt
[2025-06-04 03:36:32] -rw-r--r--. 1 boinc boinc     20532 Jun  4 03:36 stderr.txt
[2025-06-04 03:36:32] HITS file was successfully produced:
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc 183999992 Jun  4 03:13 shared/HITS.pool.root.1
[2025-06-04 03:36:32]  *** Contents of shared directory: ***
[2025-06-04 03:36:32] total 393984
[2025-06-04 03:36:32] -rw-r--r--. 2 boinc boinc 217278476 Jun  3 23:04 ATLAS.root_0
[2025-06-04 03:36:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:04 start_atlas.sh
[2025-06-04 03:36:32] -rw-r--r--. 2 boinc boinc    508878 Jun  3 23:04 input.tar.gz
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc 183999992 Jun  4 03:13 HITS.pool.root.1
[2025-06-04 03:36:32] -rw-------. 1 boinc boinc   1628160 Jun  4 03:17 result.tar.gz
03:36:33 (31780): run_atlas exited; CPU time 50200.103608
03:36:33 (31780): called boinc_finish(0)

</stderr_txt>
]]>

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