Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:16:03 (104995): wrapper (7.7.26015): starting
14:16:03 (104995): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 14:16:03] Arguments: --nthreads 12
[2025-06-03 14:16:03] Threads: 12
[2025-06-03 14:16:03] Checking for CVMFS
[2025-06-03 14:16:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:16:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:16:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:16:04] 2.12.7.0 1710 169 51380 146741 2 56 3262866 4096001 0 130560 0 273078 99.936 210362 754 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-03 14:16:04] CVMFS is ok
[2025-06-03 14:16:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:16:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-03 14:16:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-03 14:16:04] Further information can be found at the LHC@home message board.
[2025-06-03 14:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:16:04] Checking for apptainer binary...
[2025-06-03 14:16:04] apptainer is not installed, using version from CVMFS
[2025-06-03 14:16:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:16:04] hl-hn03
[2025-06-03 14:16:04] apptainer works
[2025-06-03 14:16:04] Set ATHENA_PROC_NUMBER=12
[2025-06-03 14:16:04] Set ATHENA_CORE_NUMBER=12
[2025-06-03 14:16:04] Starting ATLAS job with PandaID=6677548549
[2025-06-03 14:16:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:06:52]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:06:52] 2025-06-03 14:06:36,224 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6677548549/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,226 | INFO     | extracted standard info from prmon json
[2025-06-03 16:06:52] 2025-06-03 14:06:36,226 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:06:52] 2025-06-03 14:06:36,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:06:52] 2025-06-03 14:06:36,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:06:52] 2025-06-03 14:06:36,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:06:52] 2025-06-03 14:06:36,233 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:06:52] 2025-06-03 14:06:36,233 | INFO     | sum of square deviations: 379832238.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,235 | INFO     | sum of deviations: 11836722613.000004
[2025-06-03 16:06:52] 2025-06-03 14:06:36,235 | INFO     | mean x: 1748956318.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,235 | INFO     | mean y: 2723360.925233645
[2025-06-03 16:06:52] 2025-06-03 14:06:36,235 | INFO     | -- intersect: -54500051093.99038
[2025-06-03 16:06:52] 2025-06-03 14:06:36,236 | INFO     | intersect: -54500051093.99038
[2025-06-03 16:06:52] 2025-06-03 14:06:36,236 | INFO     | chi2: 1.9356575506710727
[2025-06-03 16:06:52] 2025-06-03 14:06:36,237 | INFO     | sum of square deviations: 329031285.5
[2025-06-03 16:06:52] 2025-06-03 14:06:36,238 | INFO     | sum of deviations: 11548870475.499998
[2025-06-03 16:06:52] 2025-06-03 14:06:36,238 | INFO     | mean x: 1748956165.5
[2025-06-03 16:06:52] 2025-06-03 14:06:36,238 | INFO     | mean y: 2722524.7156862747
[2025-06-03 16:06:52] 2025-06-03 14:06:36,239 | INFO     | -- intersect: -61384960388.15017
[2025-06-03 16:06:52] 2025-06-03 14:06:36,239 | INFO     | intersect: -61384960388.15017
[2025-06-03 16:06:52] 2025-06-03 14:06:36,239 | INFO     | chi2: 1.9385324839134523
[2025-06-03 16:06:52] 2025-06-03 14:06:36,240 | INFO     | current chi2=1.9385324839134523 (change=-0.14852488971424363 %)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,240 | INFO     | right removable region: 101
[2025-06-03 16:06:52] 2025-06-03 14:06:36,240 | INFO     | sum of square deviations: 329031285.5
[2025-06-03 16:06:52] 2025-06-03 14:06:36,242 | INFO     | sum of deviations: -10119431337.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,242 | INFO     | mean x: 1748956470.5
[2025-06-03 16:06:52] 2025-06-03 14:06:36,242 | INFO     | mean y: 2788306.6078431373
[2025-06-03 16:06:52] 2025-06-03 14:06:36,242 | INFO     | -- intersect: 53792338706.75243
[2025-06-03 16:06:52] 2025-06-03 14:06:36,243 | INFO     | intersect: 53792338706.75243
[2025-06-03 16:06:52] 2025-06-03 14:06:36,243 | INFO     | chi2: 0.11712830497930406
[2025-06-03 16:06:52] 2025-06-03 14:06:36,243 | INFO     | current chi2=0.11712830497930406 (change=93.94891390066921 %)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,244 | INFO     | sum of square deviations: 282974608.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,245 | INFO     | sum of deviations: -12621657436.999996
[2025-06-03 16:06:52] 2025-06-03 14:06:36,245 | INFO     | mean x: 1748956623.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,246 | INFO     | mean y: 2796322.7319587627
[2025-06-03 16:06:52] 2025-06-03 14:06:36,246 | INFO     | -- intersect: 78012380022.47632
[2025-06-03 16:06:52] 2025-06-03 14:06:36,246 | INFO     | intersect: 78012380022.47632
[2025-06-03 16:06:52] 2025-06-03 14:06:36,246 | INFO     | chi2: 0.04288701981384877
[2025-06-03 16:06:52] 2025-06-03 14:06:36,247 | INFO     | current chi2=0.04288701981384877 (change=63.38458084796268 %)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,247 | INFO     | sum of square deviations: 241429643.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,248 | INFO     | sum of deviations: -11655133055.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,248 | INFO     | mean x: 1748956775.5
[2025-06-03 16:06:52] 2025-06-03 14:06:36,249 | INFO     | mean y: 2792757.6739130435
[2025-06-03 16:06:52] 2025-06-03 14:06:36,249 | INFO     | -- intersect: 84434528946.32523
[2025-06-03 16:06:52] 2025-06-03 14:06:36,249 | INFO     | intersect: 84434528946.32523
[2025-06-03 16:06:52] 2025-06-03 14:06:36,250 | INFO     | chi2: 0.04017770775654597
[2025-06-03 16:06:52] 2025-06-03 14:06:36,250 | INFO     | current chi2=0.04017770775654597 (change=6.317324143907823 %)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,250 | INFO     | left removable region: 30
[2025-06-03 16:06:52] 2025-06-03 14:06:36,250 | INFO     | sum of square deviations: 110960220.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,251 | INFO     | sum of deviations: -7271878076.000001
[2025-06-03 16:06:52] 2025-06-03 14:06:36,252 | INFO     | mean x: 1748957050.0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,252 | INFO     | mean y: 2778446.943661972
[2025-06-03 16:06:52] 2025-06-03 14:06:36,252 | INFO     | -- intersect: 114622255839.47801
[2025-06-03 16:06:52] 2025-06-03 14:06:36,252 | INFO     | intersect: 114622255839.47801
[2025-06-03 16:06:52] 2025-06-03 14:06:36,253 | INFO     | chi2: 0.029806997108378714
[2025-06-03 16:06:52] 2025-06-03 14:06:36,253 | INFO     | -- intersect: 114622255839.47801
[2025-06-03 16:06:52] 2025-06-03 14:06:36,253 | INFO     | current memory leak: -65.54 B/s (using 71 data points, chi2=0.03)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,254 | INFO     | ..............................
[2025-06-03 16:06:52] 2025-06-03 14:06:36,254 | INFO     | . Timing measurements:
[2025-06-03 16:06:52] 2025-06-03 14:06:36,254 | INFO     | . get job = 0 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,255 | INFO     | . initial setup = 67 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,255 | INFO     | . payload setup = 12 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,255 | INFO     | . stage-in = 0 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,255 | INFO     | . payload execution = 6500 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,255 | INFO     | . stage-out = 0 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,256 | INFO     | . log creation = 0 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,256 | INFO     | ..............................
[2025-06-03 16:06:52] 2025-06-03 14:06:36,720 | INFO     | 
[2025-06-03 16:06:52] 2025-06-03 14:06:36,721 | INFO     | job summary report
[2025-06-03 16:06:52] 2025-06-03 14:06:36,721 | INFO     | --------------------------------------------------
[2025-06-03 16:06:52] 2025-06-03 14:06:36,721 | INFO     | PanDA job id: 6677548549
[2025-06-03 16:06:52] 2025-06-03 14:06:36,721 | INFO     | task id: 45006595
[2025-06-03 16:06:52] 2025-06-03 14:06:36,722 | INFO     | errors: (none)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,722 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:06:52] 2025-06-03 14:06:36,722 | INFO     | pilot state: finished 
[2025-06-03 16:06:52] 2025-06-03 14:06:36,722 | INFO     | transexitcode: 0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,722 | INFO     | exeerrorcode: 0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,722 | INFO     | exeerrordiag: 
[2025-06-03 16:06:52] 2025-06-03 14:06:36,723 | INFO     | exitcode: 0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,723 | INFO     | exitmsg: OK
[2025-06-03 16:06:52] 2025-06-03 14:06:36,723 | INFO     | cpuconsumptiontime: 71281 s
[2025-06-03 16:06:52] 2025-06-03 14:06:36,723 | INFO     | nevents: 400
[2025-06-03 16:06:52] 2025-06-03 14:06:36,723 | INFO     | neventsw: 0
[2025-06-03 16:06:52] 2025-06-03 14:06:36,724 | INFO     | pid: 125786
[2025-06-03 16:06:52] 2025-06-03 14:06:36,724 | INFO     | pgrp: 125786
[2025-06-03 16:06:52] 2025-06-03 14:06:36,724 | INFO     | corecount: 12
[2025-06-03 16:06:52] 2025-06-03 14:06:36,724 | INFO     | event service: False
[2025-06-03 16:06:52] 2025-06-03 14:06:36,724 | INFO     | sizes: {0: 2404356, 1: 2405219, 2: 2405219, 9: 2405453, 12: 2405481, 6516: 2432190, 6517: 2432317, 6519: 2441328, 6521: 2441384, 6530: 2441554}
[2025-06-03 16:06:52] 2025-06-03 14:06:36,725 | INFO     | --------------------------------------------------
[2025-06-03 16:06:52] 2025-06-03 14:06:36,725 | INFO     | 
[2025-06-03 16:06:52] 2025-06-03 14:06:36,725 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-06-03 16:06:52] 2025-06-03 14:06:36,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:06:52] 2025-06-03 14:06:36,769 | INFO     | job 6677548549 has completed (purged errors)
[2025-06-03 16:06:52] 2025-06-03 14:06:36,770 | INFO     | overall cleanup function is called
[2025-06-03 16:06:52] 2025-06-03 14:06:37,781 | INFO     | --- collectZombieJob: --- 10, [125786]
[2025-06-03 16:06:52] 2025-06-03 14:06:37,781 | INFO     | zombie collector waiting for pid 125786
[2025-06-03 16:06:52] 2025-06-03 14:06:37,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:06:52] 2025-06-03 14:06:37,782 | INFO     | collected zombie processes
[2025-06-03 16:06:52] 2025-06-03 14:06:37,782 | INFO     | will attempt to kill all subprocesses of pid=125786
[2025-06-03 16:06:52] 2025-06-03 14:06:37,909 | INFO     | process IDs to be killed: [125786] (in reverse order)
[2025-06-03 16:06:52] 2025-06-03 14:06:37,993 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:06:52] 2025-06-03 14:06:37,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:06:52] 2025-06-03 14:06:37,997 | INFO     | did not find any defunct processes belonging to 125786
[2025-06-03 16:06:52] 2025-06-03 14:06:37,999 | INFO     | did not find any defunct processes belonging to 125786
[2025-06-03 16:06:52] 2025-06-03 14:06:38,000 | INFO     | ready for new job
[2025-06-03 16:06:52] 2025-06-03 14:06:38,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:06:52] 2025-06-03 14:06:38,002 | INFO     | **************************************
[2025-06-03 16:06:52] 2025-06-03 14:06:38,003 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:06:52] 2025-06-03 14:06:38,003 | INFO     | **************************************
[2025-06-03 16:06:52] 2025-06-03 14:06:38,003 | INFO     | 
[2025-06-03 16:06:52] 2025-06-03 14:06:38,005 | INFO     | architecture information:
[2025-06-03 16:06:52] 2025-06-03 14:06:38,006 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:06:52] 2025-06-03 14:06:38,025 | INFO     | cat /etc/os-release:
[2025-06-03 16:06:52] NAME="CentOS Linux"
[2025-06-03 16:06:52] VERSION="7 (Core)"
[2025-06-03 16:06:52] ID="centos"
[2025-06-03 16:06:52] ID_LIKE="rhel fedora"
[2025-06-03 16:06:52] VERSION_ID="7"
[2025-06-03 16:06:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:06:52] ANSI_COLOR="0;31"
[2025-06-03 16:06:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:06:52] HOME_URL="https://www.centos.org/"
[2025-06-03 16:06:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:06:52] 
[2025-06-03 16:06:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:06:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:06:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:06:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:06:52] 
[2025-06-03 16:06:52] 2025-06-03 14:06:38,026 | INFO     | **************************************
[2025-06-03 16:06:52] 2025-06-03 14:06:38,529 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-06-03 16:06:52] 2025-06-03 14:06:38,559 | INFO     | sufficient remaining disk space (214431694848 B)
[2025-06-03 16:06:52] 2025-06-03 14:06:38,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:06:52] 2025-06-03 14:06:38,560 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:06:52] 2025-06-03 14:06:38,560 | INFO     | update_server=False
[2025-06-03 16:06:52] 2025-06-03 14:06:38,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:06:52] 2025-06-03 14:06:38,561 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:06:52] 2025-06-03 14:06:38,561 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:06:52] 2025-06-03 14:06:38,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:06:52] 2025-06-03 14:06:38,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:06:52] 2025-06-03 14:06:38,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:06:52] 2025-06-03 14:06:38,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:06:52] 2025-06-03 14:06:38,563 | INFO     | aborting loop
[2025-06-03 16:06:52] 2025-06-03 14:06:39,173 | INFO     | all data control threads have been joined
[2025-06-03 16:06:52] 2025-06-03 14:06:39,265 | INFO     | all job control threads have been joined
[2025-06-03 16:06:52] 2025-06-03 14:06:39,566 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:39,569 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:39,591 | INFO     | all payload control threads have been joined
[2025-06-03 16:06:52] 2025-06-03 14:06:39,727 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:39,763 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,021 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,081 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,179 | INFO     | [data] control thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,234 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,270 | INFO     | [job] control thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,568 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,597 | INFO     | [payload] control thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,724 | INFO     | [job] validate thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:40,909 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:41,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:41,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:06:52] 2025-06-03 14:06:41,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:06:52] 2025-06-03 14:06:42,405 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:45,910 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:06:52] 2025-06-03 14:06:46,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593411184448)>', '<ExcThread(monitor, started 140592591922944)>']
[2025-06-03 16:06:52] 2025-06-03 14:06:47,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:06:52] 2025-06-03 14:06:47,602 | INFO     | [monitor] control thread has ended
[2025-06-03 16:06:52] 2025-06-03 14:06:52,005 | INFO     | all workflow threads have been joined
[2025-06-03 16:06:52] 2025-06-03 14:06:52,006 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:06:52] 2025-06-03 14:06:52,006 | INFO     | traces error code: 0
[2025-06-03 16:06:52] 2025-06-03 14:06:52,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:06:52] 2025-06-03 14:06:52,162 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:06:52] 2025-06-03 14:06:52,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:06:52] 2025-06-03 14:06:52,172 [wrapper] pilotpid: 112427
[2025-06-03 16:06:52] 2025-06-03 14:06:52,178 [wrapper] Pilot exit status: 0
[2025-06-03 16:06:52] 2025-06-03 14:06:52,198 [wrapper] pandaids: 6677548549
[2025-06-03 16:06:52] 2025-06-03 14:06:52,263 [wrapper] cleanup supervisor_pilot  159014 112429
[2025-06-03 16:06:52] 2025-06-03 14:06:52,268 [wrapper] Test setup, not cleaning
[2025-06-03 16:06:52] 2025-06-03 14:06:52,274 [wrapper] apfmon messages muted
[2025-06-03 16:06:52] 2025-06-03 14:06:52,280 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:06:52] 2025-06-03 14:06:52,286 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:06:52]  *** Error codes and diagnostics ***
[2025-06-03 16:06:52]     "exeErrorCode": 0,
[2025-06-03 16:06:52]     "exeErrorDiag": "",
[2025-06-03 16:06:52]     "pilotErrorCode": 0,
[2025-06-03 16:06:52]     "pilotErrorDiag": "",
[2025-06-03 16:06:52]  *** Listing of results directory ***
[2025-06-03 16:06:52] insgesamt 395820
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc    495897  3. Jun 10:43 pilot3.tar.gz
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc      5111  3. Jun 10:53 queuedata.json
[2025-06-03 16:06:52] -rwx------ 1 boinc boinc     37140  3. Jun 10:56 runpilot2-wrapper.sh
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc       100  3. Jun 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:06:52] -rwxr-xr-x 1 boinc boinc      7986  3. Jun 14:16 run_atlas
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc       105  3. Jun 14:16 job.xml
[2025-06-03 16:06:52] -rw-r--r-- 2 boinc boinc     15093  3. Jun 14:16 start_atlas.sh
[2025-06-03 16:06:52] drwxrwx--x 2 boinc boinc      4096  3. Jun 14:16 shared
[2025-06-03 16:06:52] -rw-r--r-- 2 boinc boinc    508882  3. Jun 14:16 input.tar.gz
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc      6497  3. Jun 14:16 init_data.xml
[2025-06-03 16:06:52] -rw-r--r-- 2 boinc boinc 216663702  3. Jun 14:16 EVNT.45006593._001053.pool.root.1
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc         0  3. Jun 14:16 boinc_lockfile
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc      2525  3. Jun 14:16 pandaJob.out
[2025-06-03 16:06:52] -rw------- 1 boinc boinc         0  3. Jun 14:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:06:52] -rw------- 1 boinc boinc   1335673  3. Jun 14:17 cric_ddmendpoints.json
[2025-06-03 16:06:52] -rw------- 1 boinc boinc    982666  3. Jun 14:17 agis_schedconf.cvmfs.json
[2025-06-03 16:06:52] drwx------ 4 boinc boinc      4096  3. Jun 14:17 pilot3
[2025-06-03 16:06:52] -rw------- 1 boinc boinc 183094503  3. Jun 16:05 HITS.45006595._026336.pool.root.1
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc       529  3. Jun 16:06 boinc_task_state.xml
[2025-06-03 16:06:52] -rw------- 1 boinc boinc        95  3. Jun 16:06 pilot_heartbeat.json
[2025-06-03 16:06:52] -rw------- 1 boinc boinc      1016  3. Jun 16:06 memory_monitor_summary.json
[2025-06-03 16:06:52] -rw------- 1 boinc boinc    387853  3. Jun 16:06 log.45006595._026336.job.log.tgz.1
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc      8192  3. Jun 16:06 boinc_mmap_file
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc        27  3. Jun 16:06 wrapper_checkpoint.txt
[2025-06-03 16:06:52] -rw------- 1 boinc boinc      7635  3. Jun 16:06 heartbeat.json
[2025-06-03 16:06:52] -rw------- 1 boinc boinc      4484  3. Jun 16:06 pilotlog.txt
[2025-06-03 16:06:52] -rw------- 1 boinc boinc    611756  3. Jun 16:06 log.45006595._026336.job.log.1
[2025-06-03 16:06:52] -rw------- 1 boinc boinc       357  3. Jun 16:06 output.list
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc       620  3. Jun 16:06 runtime_log
[2025-06-03 16:06:52] -rw------- 1 boinc boinc   1013760  3. Jun 16:06 result.tar.gz
[2025-06-03 16:06:52] -rw------- 1 boinc boinc       646  3. Jun 16:06 x2XNDmgccg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm13iKDmvefZFm.diag
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc      8742  3. Jun 16:06 runtime_log.err
[2025-06-03 16:06:52] -rw-r--r-- 1 boinc boinc     20980  3. Jun 16:06 stderr.txt
[2025-06-03 16:06:52] HITS file was successfully produced:
[2025-06-03 16:06:52] -rw------- 1 boinc boinc 183094503  3. Jun 16:05 shared/HITS.pool.root.1
[2025-06-03 16:06:52]  *** Contents of shared directory: ***
[2025-06-03 16:06:52] insgesamt 391908
[2025-06-03 16:06:52] -rw-r--r-- 2 boinc boinc     15093  3. Jun 14:16 start_atlas.sh
[2025-06-03 16:06:52] -rw-r--r-- 2 boinc boinc    508882  3. Jun 14:16 input.tar.gz
[2025-06-03 16:06:52] -rw-r--r-- 2 boinc boinc 216663702  3. Jun 14:16 ATLAS.root_0
[2025-06-03 16:06:52] -rw------- 1 boinc boinc 183094503  3. Jun 16:05 HITS.pool.root.1
[2025-06-03 16:06:52] -rw------- 1 boinc boinc   1013760  3. Jun 16:06 result.tar.gz
16:06:53 (104995): run_atlas exited; CPU time 71365.304739
16:06:53 (104995): called boinc_finish(0)

</stderr_txt>
]]>

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