Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:16 (2606773): wrapper (7.7.26015): starting
03:01:16 (2606773): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:01:16] Arguments: --nthreads 8
[2025-06-03 03:01:16] Threads: 8
[2025-06-03 03:01:16] Checking for CVMFS
[2025-06-03 03:01:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:01:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:01:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:01:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:01:17] 2.11.3.0 21153 400999 159960 146737 2 597 39817604 45568001 6749 130560 0 1928954511 99.763 1518349987 21547 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-06-03 03:01:17] CVMFS is ok
[2025-06-03 03:01:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:01:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:01:17] Further information can be found at the LHC@home message board.
[2025-06-03 03:01:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:01:17] Checking for apptainer binary...
[2025-06-03 03:01:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:01:17] Running /usr/bin/apptainer --version
[2025-06-03 03:01:17] apptainer version 1.3.3-1.el9
[2025-06-03 03:01:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:01:17] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0023.triumf.lcg
[2025-06-03 03:01:17] apptainer works
[2025-06-03 03:01:17] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:01:17] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:01:17] Starting ATLAS job with PandaID=6677547512
[2025-06-03 03:01:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:06:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:06:01] 2025-06-03 10:05:43,520 | INFO     | extracted standard info from prmon json
[2025-06-03 03:06:01] 2025-06-03 10:05:43,521 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:06:01] 2025-06-03 10:05:43,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:06:01] 2025-06-03 10:05:43,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:06:01] 2025-06-03 10:05:43,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | WARNING  | wrong length of table data, x=[1748944988.0], y=[3156.0] (must be same and length>=4)
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | INFO     | ..............................
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | INFO     | . Timing measurements:
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . get job = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . initial setup = 6 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . payload setup = 16 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . stage-in = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . payload execution = 38 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . stage-out = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . log creation = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | ..............................
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 03:06:01] 2025-06-03 10:05:43,525 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677547512/pilotlog.txt
[2025-06-03 03:06:01] 2025-06-03 10:05:43,543 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 03:06:01] - Log from pilotlog.txt -
[2025-06-03 03:06:01] 2025-06-03 10:05:43,519 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 03:06:01] 2025-06-03 10:05:43,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677547512/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:06:01] 2025-06-03 10:05:43,520 | INFO     | extracted standard info from prmon json
[2025-06-03 03:06:01] 2025-06-03 10:05:43,521 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:06:01] 2025-06-03 10:05:43,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:06:01] 2025-06-03 10:05:43,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:06:01] 2025-06-03 10:05:43,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | WARNING  | wrong length of table data, x=[1748944988.0], y=[3156.0] (must be same and length>=4)
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | INFO     | ..............................
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | INFO     | . Timing measurements:
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . get job = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . initial setup = 6 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . payload setup = 16 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . stage-in = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . payload execution = 38 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . stage-out = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . log creation = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | ..............................
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 03:06:01] 2025-06-03 10:05:43,525 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677547512/pilotlog.txt
[2025-06-03 03:06:01] 2025-06-03 10:05:43,543 | WARNING  | 
[2025-06-03 03:06:01] [begin log extracts]
[2025-06-03 03:06:01] - Log from pilotlog.txt -
[2025-06-03 03:06:01] 2025-06-03 10:05:43,519 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 03:06:01] 2025-06-03 10:05:43,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677547512/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:06:01] 2025-06-03 10:05:43,520 | INFO     | extracted standard info from prmon json
[2025-06-03 03:06:01] 2025-06-03 10:05:43,521 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:06:01] 2025-06-03 10:05:43,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:06:01] 2025-06-03 10:05:43,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:06:01] 2025-06-03 10:05:43,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | WARNING  | wrong length of table data, x=[1748944988.0], y=[3156.0] (must be same and length>=4)
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | INFO     | ..............................
[2025-06-03 03:06:01] 2025-06-03 10:05:43,523 | INFO     | . Timing measurements:
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . get job = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . initial setup = 6 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . payload setup = 16 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . stage-in = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . payload execution = 38 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . stage-out = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | . log creation = 0 s
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | ..............................
[2025-06-03 03:06:01] 2025-06-03 10:05:43,524 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 03:06:01] 2025-06-03 10:05:43,525 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677547512/pilotlog.txt
[2025-06-03 03:06:01] [end log extracts]
[2025-06-03 03:06:01] 2025-06-03 10:05:43,543 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 03:06:01] 2025-06-03 10:05:43,544 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | 
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | job summary report
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | --------------------------------------------------
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | PanDA job id: 6677547512
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | task id: 45006595
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 03:03:22,741 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | pilot state: failed 
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | transexitcode: 65
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | exeerrorcode: 65
[2025-06-03 03:06:01] 2025-06-03 10:05:44,085 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | exitcode: 65
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | nevents: 0
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | neventsw: 0
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | pid: 2626596
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | pgrp: 2626596
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | corecount: 8
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | event service: False
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | sizes: {0: 2404357, 1: 2404955, 2: 2405238, 14: 2405238, 18: 2405472, 24: 2405500, 58: 2428801, 59: 2433064, 190: 2433178}
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | --------------------------------------------------
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | 
[2025-06-03 03:06:01] 2025-06-03 10:05:44,086 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 03:06:01] 2025-06-03 10:05:44,110 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,110 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:06:01] 2025-06-03 10:05:44,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:06:01] 2025-06-03 10:05:44,112 | INFO     | job 6677547512 has completed (purged errors)
[2025-06-03 03:06:01] 2025-06-03 10:05:44,112 | INFO     | overall cleanup function is called
[2025-06-03 03:06:01] 2025-06-03 10:05:45,118 | INFO     | --- collectZombieJob: --- 10, [2626596]
[2025-06-03 03:06:01] 2025-06-03 10:05:45,118 | INFO     | zombie collector waiting for pid 2626596
[2025-06-03 03:06:01] 2025-06-03 10:05:45,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:06:01] 2025-06-03 10:05:45,118 | INFO     | collected zombie processes
[2025-06-03 03:06:01] 2025-06-03 10:05:45,118 | INFO     | will attempt to kill all subprocesses of pid=2626596
[2025-06-03 03:06:01] 2025-06-03 10:05:45,317 | INFO     | process IDs to be killed: [2626596] (in reverse order)
[2025-06-03 03:06:01] 2025-06-03 10:05:45,410 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:06:01] 2025-06-03 10:05:45,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:06:01] 2025-06-03 10:05:45,416 | INFO     | did not find any defunct processes belonging to 2626596
[2025-06-03 03:06:01] 2025-06-03 10:05:45,429 | INFO     | did not find any defunct processes belonging to 2626596
[2025-06-03 03:06:01] 2025-06-03 10:05:45,430 | INFO     | ready for new job
[2025-06-03 03:06:01] 2025-06-03 10:05:45,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:06:01] 2025-06-03 10:05:45,431 | INFO     | **************************************
[2025-06-03 03:06:01] 2025-06-03 10:05:45,431 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:06:01] 2025-06-03 10:05:45,431 | INFO     | **************************************
[2025-06-03 03:06:01] 2025-06-03 10:05:45,432 | INFO     | 
[2025-06-03 03:06:01] 2025-06-03 10:05:45,444 | INFO     | architecture information:
[2025-06-03 03:06:01] 2025-06-03 10:05:45,445 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:06:01] 2025-06-03 10:05:45,591 | INFO     | cat /etc/os-release:
[2025-06-03 03:06:01] NAME="CentOS Linux"
[2025-06-03 03:06:01] VERSION="7 (Core)"
[2025-06-03 03:06:01] ID="centos"
[2025-06-03 03:06:01] ID_LIKE="rhel fedora"
[2025-06-03 03:06:01] VERSION_ID="7"
[2025-06-03 03:06:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:06:01] ANSI_COLOR="0;31"
[2025-06-03 03:06:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:06:01] HOME_URL="https://www.centos.org/"
[2025-06-03 03:06:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:06:01] 
[2025-06-03 03:06:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:06:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:06:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:06:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:06:01] 
[2025-06-03 03:06:01] 2025-06-03 10:05:45,591 | INFO     | **************************************
[2025-06-03 03:06:01] 2025-06-03 10:05:46,095 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 03:06:01] 2025-06-03 10:05:46,110 | INFO     | sufficient remaining disk space (1392588619776 B)
[2025-06-03 03:06:01] 2025-06-03 10:05:46,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:06:01] 2025-06-03 10:05:46,111 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:06:01] 2025-06-03 10:05:46,111 | INFO     | update_server=False
[2025-06-03 03:06:01] 2025-06-03 10:05:46,111 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:06:01] 2025-06-03 10:05:46,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:06:01] 2025-06-03 10:05:46,164 | INFO     | all job control threads have been joined
[2025-06-03 03:06:01] 2025-06-03 10:05:46,366 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 03:06:01] 2025-06-03 10:05:46,366 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 03:06:01] 2025-06-03 10:05:46,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:06:01] 2025-06-03 10:05:46,366 | INFO     | will abort loop
[2025-06-03 03:06:01] 2025-06-03 10:05:46,862 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:06:01] 2025-06-03 10:05:46,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:06:01] 2025-06-03 10:05:46,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:06:01] 2025-06-03 10:05:47,014 | INFO     | all data control threads have been joined
[2025-06-03 03:06:01] 2025-06-03 10:05:47,116 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,178 | INFO     | [job] control thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,324 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,372 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,521 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,527 | INFO     | all payload control threads have been joined
[2025-06-03 03:06:01] 2025-06-03 10:05:47,601 | INFO     | [job] validate thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,789 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,878 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,883 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:47,883 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:48,020 | INFO     | [data] control thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:48,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:48,119 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:48,533 | INFO     | [payload] control thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:48,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:06:01] 2025-06-03 10:05:49,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:06:01] 2025-06-03 10:05:49,657 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:53,573 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:06:01] 2025-06-03 10:05:55,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307651585856)>', '<ExcThread(monitor, started 140306976597760)>']
[2025-06-03 03:06:01] 2025-06-03 10:05:55,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:06:01] 2025-06-03 10:05:55,929 | INFO     | [monitor] control thread has ended
[2025-06-03 03:06:01] 2025-06-03 10:06:00,507 | INFO     | all workflow threads have been joined
[2025-06-03 03:06:01] 2025-06-03 10:06:00,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:06:01] 2025-06-03 10:06:00,512 | INFO     | traces error code: 0
[2025-06-03 03:06:01] 2025-06-03 10:06:00,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:06:01] 2025-06-03 10:06:00,771 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:06:01] 2025-06-03 10:06:00,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:06:01] 2025-06-03 10:06:00,788 [wrapper] pilotpid: 2613472
[2025-06-03 03:06:01] 2025-06-03 10:06:00,817 [wrapper] Pilot exit status: 0
[2025-06-03 03:06:01] 2025-06-03 10:06:00,986 [wrapper] pandaids: 6677547512
[2025-06-03 03:06:01] 2025-06-03 10:06:01,184 [wrapper] cleanup supervisor_pilot 2613495 2613474
[2025-06-03 03:06:01] 2025-06-03 10:06:01,209 [wrapper] Test setup, not cleaning
[2025-06-03 03:06:01] 2025-06-03 10:06:01,238 [wrapper] apfmon messages muted
[2025-06-03 03:06:01] 2025-06-03 10:06:01,273 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:06:01] 2025-06-03 10:06:01,304 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:06:01]  *** Error codes and diagnostics ***
[2025-06-03 03:06:01]     "exeErrorCode": 65,
[2025-06-03 03:06:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 03:06:01]     "pilotErrorCode": 1305,
[2025-06-03 03:06:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 03:06:01]  *** Listing of results directory ***
[2025-06-03 03:06:01] total 212996
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:43 pilot3.tar.gz
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc      5111 Jun  3 01:53 queuedata.json
[2025-06-03 03:06:01] -rwx------. 1 boinc boinc     37140 Jun  3 01:53 runpilot2-wrapper.sh
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:06:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:01 run_atlas
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:01 job.xml
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc      6452 Jun  3 03:01 init_data.xml
[2025-06-03 03:06:01] -rw-r--r--. 2 boinc boinc 214065226 Jun  3 03:01 EVNT.45006593._001046.pool.root.1
[2025-06-03 03:06:01] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:01 start_atlas.sh
[2025-06-03 03:06:01] drwxrwx--x. 2 boinc boinc      4096 Jun  3 03:01 shared
[2025-06-03 03:06:01] -rw-r--r--. 2 boinc boinc    508878 Jun  3 03:01 input.tar.gz
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:01 boinc_lockfile
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc      2526 Jun  3 03:01 pandaJob.out
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc    985490 Jun  3 03:01 agis_schedconf.cvmfs.json
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc   1603667 Jun  3 03:01 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:06:01] drwx------. 4 boinc boinc      4096 Jun  3 03:01 pilot3
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc       523 Jun  3 03:03 boinc_task_state.xml
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc       953 Jun  3 03:03 memory_monitor_summary.json
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc     21606 Jun  3 03:03 log.45006595._026166.job.log.tgz.1
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc        95 Jun  3 03:04 pilot_heartbeat.json
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc      8319 Jun  3 03:05 heartbeat.json
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:05 boinc_mmap_file
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc        22 Jun  3 03:05 wrapper_checkpoint.txt
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc      4538 Jun  3 03:06 pilotlog.txt
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc     78275 Jun  3 03:06 log.45006595._026166.job.log.1
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc       188 Jun  3 03:06 output.list
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc       620 Jun  3 03:06 runtime_log
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc    122880 Jun  3 03:06 result.tar.gz
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc       645 Jun  3 03:06 UuiKDmIacg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZ2XKDm0Tp3ym.diag
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc      8647 Jun  3 03:06 runtime_log.err
[2025-06-03 03:06:01] -rw-r--r--. 1 boinc boinc     21788 Jun  3 03:06 stderr.txt
[2025-06-03 03:06:01] No HITS result produced
[2025-06-03 03:06:01]  *** Contents of shared directory: ***
[2025-06-03 03:06:01] total 209692
[2025-06-03 03:06:01] -rw-r--r--. 2 boinc boinc 214065226 Jun  3 03:01 ATLAS.root_0
[2025-06-03 03:06:01] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:01 start_atlas.sh
[2025-06-03 03:06:01] -rw-r--r--. 2 boinc boinc    508878 Jun  3 03:01 input.tar.gz
[2025-06-03 03:06:01] -rw-------. 1 boinc boinc    122880 Jun  3 03:06 result.tar.gz
03:06:02 (2606773): run_atlas exited; CPU time 26.230331
03:06:02 (2606773): called boinc_finish(0)

</stderr_txt>
]]>

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