Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:22:46 (20066): wrapper (7.7.26015): starting
20:22:46 (20066): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 20:22:46] Arguments: --nthreads 8
[2025-06-03 20:22:46] Threads: 8
[2025-06-03 20:22:46] Checking for CVMFS
[2025-06-03 20:22:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:22:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:22:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:22:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:22:49] 2.11.2.0 22385 32304 88696 146750 1 16 15990958 25165825 4271 130560 0 18297067 99.798 19962594 2321 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 20:22:49] CVMFS is ok
[2025-06-03 20:22:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:22:49] Checking for apptainer binary...
[2025-06-03 20:22:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:22:49] Running /usr/bin/apptainer --version
[2025-06-03 20:22:49] apptainer version 1.3.2-1.el7
[2025-06-03 20:22:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:17:03] cg-vwn497.simple-grid.lan
[2025-06-03 21:17:03] apptainer works
[2025-06-03 21:17:03] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:17:03] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:17:03] Starting ATLAS job with PandaID=6677472634
[2025-06-03 21:17:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:55:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:55:55] 2025-06-03 22:40:20,084 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:55:55] 2025-06-03 22:40:20,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:55:55] 2025-06-03 22:40:20,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:55:55] 2025-06-03 22:40:20,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:55:55] 2025-06-03 22:40:20,088 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:55:55] 2025-06-03 22:40:20,089 | INFO     | sum of square deviations: 2370641658.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,090 | INFO     | sum of deviations: 31182358748.999996
[2025-06-04 00:55:55] 2025-06-03 22:40:20,090 | INFO     | mean x: 1748984313.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,090 | INFO     | mean y: 2459023.6446700506
[2025-06-04 00:55:55] 2025-06-03 22:40:20,090 | INFO     | -- intersect: -23002897399.708668
[2025-06-04 00:55:55] 2025-06-03 22:40:20,090 | INFO     | intersect: -23002897399.708668
[2025-06-04 00:55:55] 2025-06-03 22:40:20,091 | INFO     | chi2: 1.595007302921506
[2025-06-04 00:55:55] 2025-06-03 22:40:20,091 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,093 | INFO     | sum of deviations: 30296595347.499996
[2025-06-04 00:55:55] 2025-06-03 22:40:20,100 | INFO     | mean x: 1748984160.5
[2025-06-04 00:55:55] 2025-06-03 22:40:20,100 | INFO     | mean y: 2458255.9427083335
[2025-06-04 00:55:55] 2025-06-03 22:40:20,100 | INFO     | -- intersect: -24141550158.086113
[2025-06-04 00:55:55] 2025-06-03 22:40:20,101 | INFO     | intersect: -24141550158.086113
[2025-06-04 00:55:55] 2025-06-03 22:40:20,101 | INFO     | chi2: 1.5960103047972356
[2025-06-04 00:55:55] 2025-06-03 22:40:20,101 | INFO     | current chi2=1.5960103047972356 (change=-0.06288384221768162 %)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,101 | INFO     | right removable region: 191
[2025-06-04 00:55:55] 2025-06-03 22:40:20,101 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,103 | INFO     | sum of deviations: -2833361001.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,103 | INFO     | mean x: 1748984465.5
[2025-06-04 00:55:55] 2025-06-03 22:40:20,103 | INFO     | mean y: 2488245.125
[2025-06-04 00:55:55] 2025-06-03 22:40:20,103 | INFO     | -- intersect: 2260454956.9968886
[2025-06-04 00:55:55] 2025-06-03 22:40:20,103 | INFO     | intersect: 2260454956.9968886
[2025-06-04 00:55:55] 2025-06-03 22:40:20,103 | INFO     | chi2: 0.028320937399168435
[2025-06-04 00:55:55] 2025-06-03 22:40:20,104 | INFO     | current chi2=0.028320937399168435 (change=98.22440076936988 %)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,104 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,105 | INFO     | sum of deviations: -4994429595.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,105 | INFO     | mean x: 1748984618.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,105 | INFO     | mean y: 2490178.5828877008
[2025-06-04 00:55:55] 2025-06-03 22:40:20,105 | INFO     | -- intersect: 4310543414.325655
[2025-06-04 00:55:55] 2025-06-03 22:40:20,106 | INFO     | intersect: 4310543414.325655
[2025-06-04 00:55:55] 2025-06-03 22:40:20,106 | INFO     | chi2: 0.012143230268934204
[2025-06-04 00:55:55] 2025-06-03 22:40:20,106 | INFO     | current chi2=0.012143230268934204 (change=57.12278129151631 %)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,106 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | sum of deviations: -3870385736.4999995
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | mean x: 1748984770.5
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | mean y: 2489092.412087912
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | -- intersect: 3623758216.7999945
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | intersect: 3623758216.7999945
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | chi2: 0.01150943570052058
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | current chi2=0.01150943570052058 (change=5.2193243015003175 %)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,108 | INFO     | left removable region: 30
[2025-06-04 00:55:55] 2025-06-03 22:40:20,109 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,110 | INFO     | sum of deviations: 1583576226.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,121 | INFO     | mean x: 1748985045.0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,121 | INFO     | mean y: 2482792.1614906834
[2025-06-04 00:55:55] 2025-06-03 22:40:20,121 | INFO     | -- intersect: -2137872012.4626694
[2025-06-04 00:55:55] 2025-06-03 22:40:20,121 | INFO     | intersect: -2137872012.4626694
[2025-06-04 00:55:55] 2025-06-03 22:40:20,122 | INFO     | chi2: 0.00023164718428196214
[2025-06-04 00:55:55] 2025-06-03 22:40:20,122 | INFO     | -- intersect: -2137872012.4626694
[2025-06-04 00:55:55] 2025-06-03 22:40:20,122 | INFO     | current memory leak: 1.22 B/s (using 161 data points, chi2=0.00)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | ..............................
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . Timing measurements:
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . get job = 0 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . initial setup = 2 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . payload setup = 16 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . stage-in = 0 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . payload execution = 12043 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . stage-out = 2 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | . log creation = 0 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,123 | INFO     | ..............................
[2025-06-04 00:55:55] 2025-06-03 22:40:20,268 | INFO     | 
[2025-06-04 00:55:55] 2025-06-03 22:40:20,268 | INFO     | job summary report
[2025-06-04 00:55:55] 2025-06-03 22:40:20,268 | INFO     | --------------------------------------------------
[2025-06-04 00:55:55] 2025-06-03 22:40:20,268 | INFO     | PanDA job id: 6677472634
[2025-06-04 00:55:55] 2025-06-03 22:40:20,268 | INFO     | task id: 45006595
[2025-06-04 00:55:55] 2025-06-03 22:40:20,268 | INFO     | errors: (none)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | pilot state: finished 
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | transexitcode: 0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | exeerrorcode: 0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | exeerrordiag: 
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | exitcode: 0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | exitmsg: OK
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | cpuconsumptiontime: 44724 s
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | nevents: 400
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | neventsw: 0
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | pid: 23401
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | pgrp: 23401
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | corecount: 8
[2025-06-04 00:55:55] 2025-06-03 22:40:20,269 | INFO     | event service: False
[2025-06-04 00:55:55] 2025-06-03 22:40:20,270 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405445, 23: 2405445, 12063: 2434472, 12067: 2443599, 12130: 2443713}
[2025-06-04 00:55:55] 2025-06-03 22:40:20,270 | INFO     | --------------------------------------------------
[2025-06-04 00:55:55] 2025-06-03 22:40:20,270 | INFO     | 
[2025-06-04 00:55:55] 2025-06-03 22:40:20,270 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 00:55:55] 2025-06-03 22:40:20,826 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,837 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,839 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:55:55] 2025-06-03 22:40:20,839 | INFO     | job 6677472634 has completed (purged errors)
[2025-06-04 00:55:55] 2025-06-03 22:40:20,839 | INFO     | overall cleanup function is called
[2025-06-04 00:55:55] 2025-06-03 22:40:21,848 | INFO     | --- collectZombieJob: --- 10, [23401]
[2025-06-04 00:55:55] 2025-06-03 22:40:21,848 | INFO     | zombie collector waiting for pid 23401
[2025-06-04 00:55:55] 2025-06-03 22:40:21,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:55:55] 2025-06-03 22:40:21,848 | INFO     | collected zombie processes
[2025-06-04 00:55:55] 2025-06-03 22:40:21,849 | INFO     | will attempt to kill all subprocesses of pid=23401
[2025-06-04 00:55:55] 2025-06-03 22:40:21,964 | INFO     | process IDs to be killed: [23401] (in reverse order)
[2025-06-04 00:55:55] 2025-06-03 22:40:22,931 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:55:55] 2025-06-03 22:40:22,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:55:55] 2025-06-03 22:40:22,934 | INFO     | did not find any defunct processes belonging to 23401
[2025-06-04 00:55:55] 2025-06-03 22:40:22,937 | INFO     | did not find any defunct processes belonging to 23401
[2025-06-04 00:55:55] 2025-06-03 22:40:22,938 | INFO     | ready for new job
[2025-06-04 00:55:55] 2025-06-03 22:40:22,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:55:55] 2025-06-03 22:40:22,939 | INFO     | **************************************
[2025-06-04 00:55:55] 2025-06-03 22:40:22,940 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:55:55] 2025-06-03 22:40:22,940 | INFO     | **************************************
[2025-06-04 00:55:55] 2025-06-03 22:40:22,940 | INFO     | 
[2025-06-04 00:55:55] 2025-06-03 22:40:22,940 | INFO     | pilot is running in a VM
[2025-06-04 00:55:55] 2025-06-03 22:40:22,940 | INFO     | architecture information:
[2025-06-04 00:55:55] 2025-06-03 22:40:22,946 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:55:55] 2025-06-03 22:40:23,124 | INFO     | cat /etc/os-release:
[2025-06-04 00:55:55] NAME="CentOS Linux"
[2025-06-04 00:55:55] VERSION="7 (Core)"
[2025-06-04 00:55:55] ID="centos"
[2025-06-04 00:55:55] ID_LIKE="rhel fedora"
[2025-06-04 00:55:55] VERSION_ID="7"
[2025-06-04 00:55:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:55:55] ANSI_COLOR="0;31"
[2025-06-04 00:55:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:55:55] HOME_URL="https://www.centos.org/"
[2025-06-04 00:55:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:55:55] 
[2025-06-04 00:55:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:55:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:55:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:55:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:55:55] 
[2025-06-04 00:55:55] 2025-06-03 22:40:23,125 | INFO     | **************************************
[2025-06-04 00:55:55] 2025-06-03 22:40:23,628 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 00:55:55] 2025-06-03 22:40:23,814 | INFO     | sufficient remaining disk space (497463328768 B)
[2025-06-04 00:55:55] 2025-06-03 22:40:23,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:55:55] 2025-06-03 22:40:23,814 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:55:55] 2025-06-03 22:40:23,814 | INFO     | update_server=False
[2025-06-04 00:55:55] 2025-06-03 22:40:23,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:55:55] 2025-06-03 22:40:23,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:55:55] 2025-06-03 22:40:23,899 | INFO     | all data control threads have been joined
[2025-06-04 00:55:55] 2025-06-03 22:40:23,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:55:55] 2025-06-03 22:40:23,940 | INFO     | aborting loop
[2025-06-04 00:55:55] 2025-06-03 22:40:24,322 | INFO     | PID=14788 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 00:55:55] 2025-06-03 22:40:24,322 | INFO     | .. there are 9 such processes running
[2025-06-04 00:55:55] 2025-06-03 22:40:24,323 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:55:55] 2025-06-03 22:40:24,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:55:55] 2025-06-03 22:40:24,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:55:55] 2025-06-03 22:40:24,422 | INFO     | all payload control threads have been joined
[2025-06-04 00:55:55] 2025-06-03 22:40:24,820 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:24,905 | INFO     | [data] control thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:24,946 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,083 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,154 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,224 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,250 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:55:55] 2025-06-03 22:40:25,382 | INFO     | all job control threads have been joined
[2025-06-04 00:55:55] 2025-06-03 22:40:25,428 | INFO     | [payload] control thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,691 | INFO     | [job] validate thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,822 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:25,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:26,055 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:26,057 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:26,292 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:26,388 | INFO     | [job] control thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:26,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:55:55] 2025-06-03 22:40:30,600 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:55:55] 2025-06-03 22:40:31,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041431504704)>', '<ExcThread(monitor, started 140040621516544)>']
[2025-06-04 00:55:55] 2025-06-03 22:40:32,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:55:55] 2025-06-03 22:40:32,372 | INFO     | [monitor] control thread has ended
[2025-06-04 00:55:55] 2025-06-03 22:40:36,834 | INFO     | all workflow threads have been joined
[2025-06-04 00:55:55] 2025-06-03 22:40:36,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:55:55] 2025-06-03 22:40:36,834 | INFO     | traces error code: 0
[2025-06-04 00:55:55] 2025-06-03 22:40:36,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:55:55] 2025-06-03 22:40:37,143 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:55:55] 2025-06-03 22:40:37,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:55:55] 2025-06-03 22:40:37,312 [wrapper] pilotpid: 14788
[2025-06-04 00:55:55] 2025-06-03 22:40:37,414 [wrapper] Pilot exit status: 0
[2025-06-04 00:55:55] 2025-06-03 22:40:37,772 [wrapper] pandaids: 6677472634
[2025-06-04 00:55:55] 2025-06-03 22:40:38,469 [wrapper] cleanup supervisor_pilot 32322 14789
[2025-06-04 00:55:55] 2025-06-03 22:40:38,538 [wrapper] Test setup, not cleaning
[2025-06-04 00:55:55] 2025-06-03 22:40:38,630 [wrapper] apfmon messages muted
[2025-06-04 00:55:55] 2025-06-03 22:40:38,692 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:55:55] 2025-06-03 22:40:38,723 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:55:55]  *** Error codes and diagnostics ***
[2025-06-04 00:55:55]     "exeErrorCode": 0,
[2025-06-04 00:55:55]     "exeErrorDiag": "",
[2025-06-04 00:55:55]     "pilotErrorCode": 0,
[2025-06-04 00:55:55]     "pilotErrorDiag": "",
[2025-06-04 00:55:55]  *** Listing of results directory ***
[2025-06-04 00:55:55] total 383516
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:38 pilot3.tar.gz
[2025-06-04 00:55:55] -rwx------. 1 boinc boinc     37140 Jun  3 08:09 runpilot2-wrapper.sh
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:09 queuedata.json
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc       100 Jun  3 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:55:55] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 20:22 run_atlas
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc       105 Jun  3 20:22 job.xml
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc      6392 Jun  3 20:22 init_data.xml
[2025-06-04 00:55:55] -rw-r--r--. 2 boinc boinc 213242985 Jun  3 20:22 EVNT.45006593._000871.pool.root.1
[2025-06-04 00:55:55] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:22 start_atlas.sh
[2025-06-04 00:55:55] drwxrwx--x. 2 boinc boinc        68 Jun  3 20:22 shared
[2025-06-04 00:55:55] -rw-r--r--. 2 boinc boinc    508886 Jun  3 20:22 input.tar.gz
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc         0 Jun  3 20:22 boinc_lockfile
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc      2524 Jun  3 21:17 pandaJob.out
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc    985078 Jun  3 21:17 agis_schedconf.cvmfs.json
[2025-06-04 00:55:55] drwx------. 4 boinc boinc      4096 Jun  3 21:17 pilot3
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc 172787741 Jun  4 00:38 HITS.45006595._021768.pool.root.1
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc       531 Jun  4 00:38 boinc_task_state.xml
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc      1019 Jun  4 00:39 memory_monitor_summary.json
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc   1603667 Jun  4 00:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc    371947 Jun  4 00:39 log.45006595._021768.job.log.tgz.1
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc      7691 Jun  4 00:40 heartbeat.json
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc        95 Jun  4 00:40 pilot_heartbeat.json
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc      4809 Jun  4 00:40 pilotlog.txt
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc   1063656 Jun  4 00:40 log.45006595._021768.job.log.1
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc       357 Jun  4 00:40 output.list
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc       620 Jun  4 00:40 runtime_log
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc   1454080 Jun  4 00:40 result.tar.gz
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc      8673 Jun  4 00:40 runtime_log.err
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc       657 Jun  4 00:40 k7YNDmL1Zg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmYXKDmS75WQo.diag
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc      8192 Jun  4 00:55 boinc_mmap_file
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc        28 Jun  4 00:55 wrapper_checkpoint.txt
[2025-06-04 00:55:55] -rw-r--r--. 1 boinc boinc     20546 Jun  4 00:55 stderr.txt
[2025-06-04 00:55:55] HITS file was successfully produced:
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc 172787741 Jun  4 00:38 shared/HITS.pool.root.1
[2025-06-04 00:55:55]  *** Contents of shared directory: ***
[2025-06-04 00:55:55] total 378924
[2025-06-04 00:55:55] -rw-r--r--. 2 boinc boinc 213242985 Jun  3 20:22 ATLAS.root_0
[2025-06-04 00:55:55] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:22 start_atlas.sh
[2025-06-04 00:55:55] -rw-r--r--. 2 boinc boinc    508886 Jun  3 20:22 input.tar.gz
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc 172787741 Jun  4 00:38 HITS.pool.root.1
[2025-06-04 00:55:55] -rw-------. 1 boinc boinc   1454080 Jun  4 00:40 result.tar.gz
00:55:57 (20066): run_atlas exited; CPU time 44862.744777
00:55:57 (20066): called boinc_finish(0)

</stderr_txt>
]]>

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