Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:52:04 (142489): wrapper (7.7.26015): starting
05:52:04 (142489): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:52:04] Arguments: --nthreads 8
[2025-06-03 05:52:04] Threads: 8
[2025-06-03 05:52:04] Checking for CVMFS
[2025-06-03 05:52:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:52:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:52:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:52:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:52:05] 2.12.6.0 34999 37052 340240 146737 0 195 22470511 32935936 10274 16776704 1 278012242 99.598 289512465 22189 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 05:52:05] CVMFS is ok
[2025-06-03 05:52:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 05:52:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 05:52:05] Further information can be found at the LHC@home message board.
[2025-06-03 05:52:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:52:05] Checking for apptainer binary...
[2025-06-03 05:52:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:52:05] Running /usr/bin/apptainer --version
[2025-06-03 05:52:05] apptainer version 1.4.1-1.el9
[2025-06-03 05:52:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:52:05] c7-2-16.aglt2.org
[2025-06-03 05:52:05] apptainer works
[2025-06-03 05:52:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:52:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:52:05] Starting ATLAS job with PandaID=6677516162
[2025-06-03 05:52:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:57:03]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:57:03]  guid=1bc5aabe-5e3d-4c59-83f1-c363aa15eb38
[2025-06-03 06:57:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 06:57:03]  is_altstaged=None
[2025-06-03 06:57:03]  is_tar=False
[2025-06-03 06:57:03]  lfn=log.45006595._023790.job.log.tgz.1
[2025-06-03 06:57:03]  mtime=0
[2025-06-03 06:57:03]  protocol_id=None
[2025-06-03 06:57:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 06:57:03]  replicas=None
[2025-06-03 06:57:03]  scope=mc23_13p6TeV
[2025-06-03 06:57:03]  status=None
[2025-06-03 06:57:03]  status_code=0
[2025-06-03 06:57:03]  storage_token=
[2025-06-03 06:57:03]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6677516162/log.45006595._023790.job.log.tgz.1
[2025-06-03 06:57:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/72/log.45006595._023790.job.log.tgz.1
[2025-06-03 06:57:03]  workdir=None
[2025-06-03 06:57:03] ]
[2025-06-03 06:57:03] 2025-06-03 10:56:34,689 | INFO     | transferring file log.45006595._023790.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6677516162/log.45006595._023790.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 06:57:03] 2025-06-03 10:56:34,689 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6677516162/log.45006595._023790.job.log.tgz.1 /tmp/boinchome/slots/9/log.45006595._023790.job
[2025-06-03 06:57:03] 2025-06-03 10:56:34,712 | INFO     | adding to output.list: log.45006595._023790.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/72/log.45006595._023790.job.log.tg
[2025-06-03 06:57:03] 2025-06-03 10:56:34,713 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 06:57:03] 2025-06-03 10:56:34,713 | INFO     | summary of transferred files:
[2025-06-03 06:57:03] 2025-06-03 10:56:34,713 | INFO     |  -- lfn=log.45006595._023790.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 06:57:03] 2025-06-03 10:56:34,713 | INFO     | stage-out finished correctly
[2025-06-03 06:57:03] 2025-06-03 10:56:35,425 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 06:57:03] 2025-06-03 10:56:38,116 | INFO     | job 6677516162 has state=finished
[2025-06-03 06:57:03] 2025-06-03 10:56:38,116 | INFO     | preparing for final server update for job 6677516162 in state='finished'
[2025-06-03 06:57:03] 2025-06-03 10:56:38,117 | INFO     | this job has now completed (state=finished)
[2025-06-03 06:57:03] 2025-06-03 10:56:38,117 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 06:57:03] 2025-06-03 10:56:38,117 | INFO     | log transfer has been attempted: DONE
[2025-06-03 06:57:03] 2025-06-03 10:56:38,117 | INFO     | job 6677516162 has finished - writing final server update
[2025-06-03 06:57:03] 2025-06-03 10:56:38,118 | INFO     | total number of processed events: 400 (read)
[2025-06-03 06:57:03] 2025-06-03 10:56:38,135 | INFO     | executing command: lscpu
[2025-06-03 06:57:03] 2025-06-03 10:56:38,224 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 06:57:03] 2025-06-03 10:56:39,642 | WARNING  | process 154718 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 06:57:03] 2025-06-03 10:56:39,642 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6677516162/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:57:03] 2025-06-03 10:56:39,942 | INFO     | number of running child processes to parent process 154718: 1
[2025-06-03 06:57:03] 2025-06-03 10:56:39,942 | INFO     | maximum number of monitored processes: 6
[2025-06-03 06:57:03] 2025-06-03 10:56:42,080 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 06:57:03] 2025-06-03 10:56:42,080 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6677516162/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:57:03] 2025-06-03 10:56:42,080 | INFO     | extracted standard info from prmon json
[2025-06-03 06:57:03] 2025-06-03 10:56:42,081 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:57:03] 2025-06-03 10:56:42,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:57:03] 2025-06-03 10:56:42,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:57:03] 2025-06-03 10:56:42,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | sum of square deviations: 54438230.0
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | sum of deviations: 7298365343.499999
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | mean x: 1748946347.5
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | mean y: 2086638.5535714286
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | -- intersect: -234473747903.365
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | intersect: -234473747903.365
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | chi2: 0.8086417844624276
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | -- intersect: -234473747903.365
[2025-06-03 06:57:03] 2025-06-03 10:56:42,082 | INFO     | current memory leak: 134.07 B/s (using 56 data points, chi2=0.81)
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | ..............................
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . Timing measurements:
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . get job = 0 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . initial setup = 2 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . payload setup = 7 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . stage-in = 0 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . payload execution = 3830 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . stage-out = 0 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | . log creation = 0 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,083 | INFO     | ..............................
[2025-06-03 06:57:03] 2025-06-03 10:56:42,128 | INFO     | 
[2025-06-03 06:57:03] 2025-06-03 10:56:42,128 | INFO     | job summary report
[2025-06-03 06:57:03] 2025-06-03 10:56:42,128 | INFO     | --------------------------------------------------
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | PanDA job id: 6677516162
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | task id: 45006595
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | errors: (none)
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | pilot state: finished 
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | transexitcode: 0
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | exeerrorcode: 0
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | exeerrordiag: 
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | exitcode: 0
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | exitmsg: OK
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | cpuconsumptiontime: 25159 s
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | nevents: 400
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | neventsw: 0
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | pid: 154718
[2025-06-03 06:57:03] 2025-06-03 10:56:42,129 | INFO     | pgrp: 154718
[2025-06-03 06:57:03] 2025-06-03 10:56:42,130 | INFO     | corecount: 8
[2025-06-03 06:57:03] 2025-06-03 10:56:42,130 | INFO     | event service: False
[2025-06-03 06:57:03] 2025-06-03 10:56:42,130 | INFO     | sizes: {0: 2405180, 5: 2405386, 11: 2405442, 3841: 2431157, 3843: 2440154, 3850: 2440268}
[2025-06-03 06:57:03] 2025-06-03 10:56:42,130 | INFO     | --------------------------------------------------
[2025-06-03 06:57:03] 2025-06-03 10:56:42,130 | INFO     | 
[2025-06-03 06:57:03] 2025-06-03 10:56:42,130 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-06-03 06:57:03] 2025-06-03 10:56:42,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:57:03] 2025-06-03 10:56:42,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:57:03] 2025-06-03 10:56:42,150 | INFO     | job 6677516162 has completed (purged errors)
[2025-06-03 06:57:03] 2025-06-03 10:56:42,150 | INFO     | overall cleanup function is called
[2025-06-03 06:57:03] 2025-06-03 10:56:43,158 | INFO     | --- collectZombieJob: --- 10, [154718]
[2025-06-03 06:57:03] 2025-06-03 10:56:43,158 | INFO     | zombie collector waiting for pid 154718
[2025-06-03 06:57:03] 2025-06-03 10:56:43,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:57:03] 2025-06-03 10:56:43,159 | INFO     | collected zombie processes
[2025-06-03 06:57:03] 2025-06-03 10:56:43,159 | INFO     | will attempt to kill all subprocesses of pid=154718
[2025-06-03 06:57:03] 2025-06-03 10:56:43,582 | INFO     | process IDs to be killed: [154718] (in reverse order)
[2025-06-03 06:57:03] 2025-06-03 10:56:43,684 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:57:03] 2025-06-03 10:56:43,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:57:03] 2025-06-03 10:56:43,701 | INFO     | did not find any defunct processes belonging to 154718
[2025-06-03 06:57:03] 2025-06-03 10:56:43,716 | INFO     | did not find any defunct processes belonging to 154718
[2025-06-03 06:57:03] 2025-06-03 10:56:43,716 | INFO     | ready for new job
[2025-06-03 06:57:03] 2025-06-03 10:56:43,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:57:03] 2025-06-03 10:56:43,718 | INFO     | **************************************
[2025-06-03 06:57:03] 2025-06-03 10:56:43,718 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:57:03] 2025-06-03 10:56:43,718 | INFO     | **************************************
[2025-06-03 06:57:03] 2025-06-03 10:56:43,719 | INFO     | 
[2025-06-03 06:57:03] 2025-06-03 10:56:43,737 | INFO     | architecture information:
[2025-06-03 06:57:03] 2025-06-03 10:56:43,737 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:57:03] 2025-06-03 10:56:43,747 | INFO     | cat /etc/os-release:
[2025-06-03 06:57:03] NAME="CentOS Linux"
[2025-06-03 06:57:03] VERSION="7 (Core)"
[2025-06-03 06:57:03] ID="centos"
[2025-06-03 06:57:03] ID_LIKE="rhel fedora"
[2025-06-03 06:57:03] VERSION_ID="7"
[2025-06-03 06:57:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:57:03] ANSI_COLOR="0;31"
[2025-06-03 06:57:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:57:03] HOME_URL="https://www.centos.org/"
[2025-06-03 06:57:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:57:03] 
[2025-06-03 06:57:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:57:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:57:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:57:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:57:03] 
[2025-06-03 06:57:03] 2025-06-03 10:56:43,748 | INFO     | **************************************
[2025-06-03 06:57:03] 2025-06-03 10:56:44,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-06-03 06:57:03] 2025-06-03 10:56:44,262 | INFO     | sufficient remaining disk space (70711771136 B)
[2025-06-03 06:57:03] 2025-06-03 10:56:44,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:57:03] 2025-06-03 10:56:44,262 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:57:03] 2025-06-03 10:56:44,262 | INFO     | update_server=False
[2025-06-03 06:57:03] 2025-06-03 10:56:44,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:57:03] 2025-06-03 10:56:44,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:57:03] 2025-06-03 10:56:44,263 | INFO     | aborting loop
[2025-06-03 06:57:03] 2025-06-03 10:56:44,335 | INFO     | all data control threads have been joined
[2025-06-03 06:57:03] 2025-06-03 10:56:44,631 | INFO     | all job control threads have been joined
[2025-06-03 06:57:03] 2025-06-03 10:56:45,051 | INFO     | PID=146247 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 06:57:03] 2025-06-03 10:56:45,052 | INFO     | .. there are 13 such processes running
[2025-06-03 06:57:03] 2025-06-03 10:56:45,052 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:57:03] 2025-06-03 10:56:45,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:57:03] 2025-06-03 10:56:45,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:57:03] 2025-06-03 10:56:45,216 | INFO     | all payload control threads have been joined
[2025-06-03 06:57:03] 2025-06-03 10:56:45,265 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:45,268 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:45,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:57:03] 2025-06-03 10:56:45,340 | INFO     | [data] control thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:45,363 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:45,635 | INFO     | [job] control thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:45,769 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:45,867 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:46,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:57:03] 2025-06-03 10:56:46,103 | INFO     | [job] validate thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:46,221 | INFO     | [payload] control thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:46,655 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:46,690 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:46,722 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:47,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:57:03] 2025-06-03 10:56:47,328 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:48,144 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:50,013 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:55,057 | INFO     | job.realtimelogging is not enabled
[2025-06-03 06:57:03] 2025-06-03 10:56:56,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:57:03] 2025-06-03 10:56:58,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900466255680)>', '<ExcThread(monitor, started 139899684509440)>']
[2025-06-03 06:57:03] 2025-06-03 10:56:58,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:57:03] 2025-06-03 10:56:58,117 | INFO     | [monitor] control thread has ended
[2025-06-03 06:57:03] 2025-06-03 10:57:03,104 | INFO     | all workflow threads have been joined
[2025-06-03 06:57:03] 2025-06-03 10:57:03,104 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:57:03] 2025-06-03 10:57:03,104 | INFO     | traces error code: 0
[2025-06-03 06:57:03] 2025-06-03 10:57:03,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:57:03] 2025-06-03 10:57:03,199 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:57:03] 2025-06-03 10:57:03,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:57:03] 2025-06-03 10:57:03,204 [wrapper] pilotpid: 146247
[2025-06-03 06:57:03] 2025-06-03 10:57:03,206 [wrapper] Pilot exit status: 0
[2025-06-03 06:57:03] 2025-06-03 10:57:03,213 [wrapper] pandaids: 6677516162
[2025-06-03 06:57:03] 2025-06-03 10:57:03,307 [wrapper] cleanup supervisor_pilot  666304 146248
[2025-06-03 06:57:03] 2025-06-03 10:57:03,310 [wrapper] Test setup, not cleaning
[2025-06-03 06:57:03] 2025-06-03 10:57:03,314 [wrapper] apfmon messages muted
[2025-06-03 06:57:03] 2025-06-03 10:57:03,316 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:57:03] 2025-06-03 10:57:03,320 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:57:03]  *** Error codes and diagnostics ***
[2025-06-03 06:57:03]     "exeErrorCode": 0,
[2025-06-03 06:57:03]     "exeErrorDiag": "",
[2025-06-03 06:57:03]     "pilotErrorCode": 0,
[2025-06-03 06:57:03]     "pilotErrorDiag": "",
[2025-06-03 06:57:03]  *** Listing of results directory ***
[2025-06-03 06:57:03] total 387736
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 03:23 pilot3.tar.gz
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 03:26 queuedata.json
[2025-06-03 06:57:03] -rwx------. 1 boincer umatlas     37140 Jun  3 03:27 runpilot2-wrapper.sh
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas       100 Jun  3 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:57:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 05:52 run_atlas
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas       105 Jun  3 05:52 job.xml
[2025-06-03 06:57:03] -rw-r--r--. 2 boincer umatlas 216084338 Jun  3 05:52 EVNT.45006593._000952.pool.root.1
[2025-06-03 06:57:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 05:52 shared
[2025-06-03 06:57:03] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 05:52 input.tar.gz
[2025-06-03 06:57:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:52 start_atlas.sh
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas         0 Jun  3 05:52 boinc_lockfile
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas      2523 Jun  3 05:52 pandaJob.out
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas    985490 Jun  3 05:52 agis_schedconf.cvmfs.json
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas   1603667 Jun  3 05:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:57:03] drwx------. 4 boincer umatlas      4096 Jun  3 05:52 pilot3
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas 175773322 Jun  3 06:56 HITS.45006595._023790.pool.root.1
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas       529 Jun  3 06:56 boinc_task_state.xml
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas      1029 Jun  3 06:56 memory_monitor_summary.json
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas    285175 Jun  3 06:56 log.45006595._023790.job.log.tgz.1
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas        95 Jun  3 06:56 pilot_heartbeat.json
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas      7685 Jun  3 06:56 heartbeat.json
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas      6935 Jun  3 06:56 init_data.xml
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 06:56 boinc_mmap_file
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas        27 Jun  3 06:56 wrapper_checkpoint.txt
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas      4820 Jun  3 06:57 pilotlog.txt
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas    387188 Jun  3 06:57 log.45006595._023790.job.log.1
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas       357 Jun  3 06:57 output.list
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas       620 Jun  3 06:57 runtime_log
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas    696320 Jun  3 06:57 result.tar.gz
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 06:57 runtime_log.err
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas       650 Jun  3 06:57 gAvKDmoEbg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAgiKDmeUHAOn.diag
[2025-06-03 06:57:03] -rw-r--r--. 1 boincer umatlas     21323 Jun  3 06:57 stderr.txt
[2025-06-03 06:57:03] HITS file was successfully produced:
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas 175773322 Jun  3 06:56 shared/HITS.pool.root.1
[2025-06-03 06:57:03]  *** Contents of shared directory: ***
[2025-06-03 06:57:03] total 383880
[2025-06-03 06:57:03] -rw-r--r--. 2 boincer umatlas 216084338 Jun  3 05:52 ATLAS.root_0
[2025-06-03 06:57:03] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 05:52 input.tar.gz
[2025-06-03 06:57:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:52 start_atlas.sh
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas 175773322 Jun  3 06:56 HITS.pool.root.1
[2025-06-03 06:57:03] -rw-------. 1 boincer umatlas    696320 Jun  3 06:57 result.tar.gz
06:57:04 (142489): run_atlas exited; CPU time 25278.919118
06:57:04 (142489): called boinc_finish(0)

</stderr_txt>
]]>

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