Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:04:56 (15490): wrapper (7.7.26015): starting
21:04:56 (15490): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:04:56] Arguments: --nthreads 8
[2025-06-03 21:04:56] Threads: 8
[2025-06-03 21:04:56] Checking for CVMFS
[2025-06-03 21:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:04:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:04:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:04:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:04:59] 2.11.2.0 16701 32277 100888 146750 0 261 14916673 25165825 4269 130560 0 18550974 99.838 18596065 2570 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 21:04:59] CVMFS is ok
[2025-06-03 21:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:04:59] Checking for apptainer binary...
[2025-06-03 21:04:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:04:59] Running /usr/bin/apptainer --version
[2025-06-03 21:04:59] apptainer version 1.3.2-1.el7
[2025-06-03 21:04:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:35:23] cg-vwn475.simple-grid.lan
[2025-06-03 21:35:23] apptainer works
[2025-06-03 21:35:23] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:35:23] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:35:23] Starting ATLAS job with PandaID=6665751696
[2025-06-03 21:35:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:40:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:40:29] 2025-06-04 00:38:53,561 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:40:29] 2025-06-04 00:38:53,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:40:29] 2025-06-04 00:38:53,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:40:29] 2025-06-04 00:38:53,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:40:29] 2025-06-04 00:38:53,567 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:40:29] 2025-06-04 00:38:53,568 | INFO     | sum of square deviations: 7178069470.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,575 | INFO     | sum of deviations: 99777161431.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,576 | INFO     | mean x: 1748988708.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,576 | INFO     | mean y: 2453520.7298245616
[2025-06-04 02:40:29] 2025-06-04 00:38:53,576 | INFO     | -- intersect: -24308975811.13371
[2025-06-04 02:40:29] 2025-06-04 00:38:53,576 | INFO     | intersect: -24308975811.13371
[2025-06-04 02:40:29] 2025-06-04 00:38:53,577 | INFO     | chi2: 7.3245929611506115
[2025-06-04 02:40:29] 2025-06-04 00:38:53,577 | INFO     | sum of square deviations: 6806862510.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,579 | INFO     | sum of deviations: 117572162957.50003
[2025-06-04 02:40:29] 2025-06-04 00:38:53,580 | INFO     | mean x: 1748988555.5
[2025-06-04 02:40:29] 2025-06-04 00:38:53,580 | INFO     | mean y: 2460715.0035714284
[2025-06-04 02:40:29] 2025-06-04 00:38:53,580 | INFO     | -- intersect: -30207106050.29438
[2025-06-04 02:40:29] 2025-06-04 00:38:53,580 | INFO     | intersect: -30207106050.29438
[2025-06-04 02:40:29] 2025-06-04 00:38:53,580 | INFO     | chi2: 6.533936456629385
[2025-06-04 02:40:29] 2025-06-04 00:38:53,580 | INFO     | current chi2=6.533936456629385 (change=10.79454529029588 %)
[2025-06-04 02:40:29] 2025-06-04 00:38:53,580 | INFO     | right removable region: 279
[2025-06-04 02:40:29] 2025-06-04 00:38:53,581 | INFO     | sum of square deviations: 6806862510.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,583 | INFO     | sum of deviations: -947442636.5
[2025-06-04 02:40:29] 2025-06-04 00:38:53,583 | INFO     | mean x: 1748988860.5
[2025-06-04 02:40:29] 2025-06-04 00:38:53,584 | INFO     | mean y: 2494879.8964285715
[2025-06-04 02:40:29] 2025-06-04 00:38:53,584 | INFO     | -- intersect: 245935468.67971087
[2025-06-04 02:40:29] 2025-06-04 00:38:53,584 | INFO     | intersect: 245935468.67971087
[2025-06-04 02:40:29] 2025-06-04 00:38:53,584 | INFO     | chi2: 2.4163344547319068
[2025-06-04 02:40:29] 2025-06-04 00:38:53,584 | INFO     | current chi2=2.4163344547319068 (change=67.01066574554979 %)
[2025-06-04 02:40:29] 2025-06-04 00:38:53,585 | INFO     | sum of square deviations: 6448679050.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,587 | INFO     | sum of deviations: -48731945899.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,587 | INFO     | mean x: 1748989013.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,587 | INFO     | mean y: 2515111.403636364
[2025-06-04 02:40:29] 2025-06-04 00:38:53,587 | INFO     | -- intersect: 13219429350.52388
[2025-06-04 02:40:29] 2025-06-04 00:38:53,587 | INFO     | intersect: 13219429350.52388
[2025-06-04 02:40:29] 2025-06-04 00:38:53,588 | INFO     | chi2: 1.0434544375336652
[2025-06-04 02:40:29] 2025-06-04 00:38:53,588 | INFO     | current chi2=1.0434544375336652 (change=56.81663871115735 %)
[2025-06-04 02:40:29] 2025-06-04 00:38:53,588 | INFO     | sum of square deviations: 6103286527.5
[2025-06-04 02:40:29] 2025-06-04 00:38:53,590 | INFO     | sum of deviations: -45778630319.5
[2025-06-04 02:40:29] 2025-06-04 00:38:53,591 | INFO     | mean x: 1748989165.5
[2025-06-04 02:40:29] 2025-06-04 00:38:53,591 | INFO     | mean y: 2513783.1666666665
[2025-06-04 02:40:29] 2025-06-04 00:38:53,591 | INFO     | -- intersect: 13121073444.338547
[2025-06-04 02:40:29] 2025-06-04 00:38:53,591 | INFO     | intersect: 13121073444.338547
[2025-06-04 02:40:29] 2025-06-04 00:38:53,591 | INFO     | chi2: 1.0279604950863166
[2025-06-04 02:40:29] 2025-06-04 00:38:53,591 | INFO     | current chi2=1.0279604950863166 (change=1.4848700518223348 %)
[2025-06-04 02:40:29] 2025-06-04 00:38:53,591 | INFO     | left removable region: 30
[2025-06-04 02:40:29] 2025-06-04 00:38:53,592 | INFO     | sum of square deviations: 4787066500.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,594 | INFO     | sum of deviations: 1256940075.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,594 | INFO     | mean x: 1748989440.0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,594 | INFO     | mean y: 2508728.9116465864
[2025-06-04 02:40:29] 2025-06-04 00:38:53,594 | INFO     | -- intersect: -456723437.15243626
[2025-06-04 02:40:29] 2025-06-04 00:38:53,594 | INFO     | intersect: -456723437.15243626
[2025-06-04 02:40:29] 2025-06-04 00:38:53,594 | INFO     | chi2: 0.050266516692490486
[2025-06-04 02:40:29] 2025-06-04 00:38:53,595 | INFO     | -- intersect: -456723437.15243626
[2025-06-04 02:40:29] 2025-06-04 00:38:53,595 | INFO     | current memory leak: 0.26 B/s (using 249 data points, chi2=0.05)
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | ..............................
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | . Timing measurements:
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | . get job = 0 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | . initial setup = 6 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | . payload setup = 188 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | . stage-in = 0 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | . payload execution = 17536 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,596 | INFO     | . stage-out = 3 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,599 | INFO     | . log creation = 1 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,599 | INFO     | ..............................
[2025-06-04 02:40:29] 2025-06-04 00:38:53,714 | INFO     | 
[2025-06-04 02:40:29] 2025-06-04 00:38:53,714 | INFO     | job summary report
[2025-06-04 02:40:29] 2025-06-04 00:38:53,714 | INFO     | --------------------------------------------------
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | PanDA job id: 6665751696
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | task id: 44871837
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | errors: (none)
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | pilot state: finished 
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | transexitcode: 0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | exeerrorcode: 0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | exeerrordiag: 
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | exitcode: 0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | exitmsg: OK
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | cpuconsumptiontime: 64153 s
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | nevents: 400
[2025-06-04 02:40:29] 2025-06-04 00:38:53,715 | INFO     | neventsw: 0
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | pid: 12645
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | pgrp: 12645
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | corecount: 8
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | event service: False
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | sizes: {0: 2404400, 1: 2405086, 2: 2405285, 13: 2405285, 23: 2405341, 34: 2405369, 45: 2405525, 55: 2405553, 66: 2405581, 77: 2405609, 87: 2405871, 88: 2406179, 17
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | --------------------------------------------------
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | 
[2025-06-04 02:40:29] 2025-06-04 00:38:53,716 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-04 02:40:29] 2025-06-04 00:38:54,080 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:40:29] 2025-06-04 00:38:54,082 | INFO     | job 6665751696 has completed (purged errors)
[2025-06-04 02:40:29] 2025-06-04 00:38:54,083 | INFO     | overall cleanup function is called
[2025-06-04 02:40:29] 2025-06-04 00:38:55,092 | INFO     | --- collectZombieJob: --- 10, [12645]
[2025-06-04 02:40:29] 2025-06-04 00:38:55,093 | INFO     | zombie collector waiting for pid 12645
[2025-06-04 02:40:29] 2025-06-04 00:38:55,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:40:29] 2025-06-04 00:38:55,093 | INFO     | collected zombie processes
[2025-06-04 02:40:29] 2025-06-04 00:38:55,093 | INFO     | will attempt to kill all subprocesses of pid=12645
[2025-06-04 02:40:29] 2025-06-04 00:38:55,191 | INFO     | process IDs to be killed: [12645] (in reverse order)
[2025-06-04 02:40:29] 2025-06-04 00:38:56,176 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:40:29] 2025-06-04 00:38:56,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:40:29] 2025-06-04 00:38:56,179 | INFO     | did not find any defunct processes belonging to 12645
[2025-06-04 02:40:29] 2025-06-04 00:38:56,182 | INFO     | did not find any defunct processes belonging to 12645
[2025-06-04 02:40:29] 2025-06-04 00:38:56,182 | INFO     | ready for new job
[2025-06-04 02:40:29] 2025-06-04 00:38:56,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:40:29] 2025-06-04 00:38:56,184 | INFO     | **************************************
[2025-06-04 02:40:29] 2025-06-04 00:38:56,185 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:40:29] 2025-06-04 00:38:56,185 | INFO     | **************************************
[2025-06-04 02:40:29] 2025-06-04 00:38:56,185 | INFO     | 
[2025-06-04 02:40:29] 2025-06-04 00:38:56,185 | INFO     | pilot is running in a VM
[2025-06-04 02:40:29] 2025-06-04 00:38:56,185 | INFO     | architecture information:
[2025-06-04 02:40:29] 2025-06-04 00:38:56,198 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:40:29] 2025-06-04 00:38:56,474 | INFO     | cat /etc/os-release:
[2025-06-04 02:40:29] NAME="CentOS Linux"
[2025-06-04 02:40:29] VERSION="7 (Core)"
[2025-06-04 02:40:29] ID="centos"
[2025-06-04 02:40:29] ID_LIKE="rhel fedora"
[2025-06-04 02:40:29] VERSION_ID="7"
[2025-06-04 02:40:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:40:29] ANSI_COLOR="0;31"
[2025-06-04 02:40:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:40:29] HOME_URL="https://www.centos.org/"
[2025-06-04 02:40:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:40:29] 
[2025-06-04 02:40:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:40:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:40:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:40:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:40:29] 
[2025-06-04 02:40:29] 2025-06-04 00:38:56,474 | INFO     | **************************************
[2025-06-04 02:40:29] 2025-06-04 00:38:56,978 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-04 02:40:29] 2025-06-04 00:38:57,291 | INFO     | sufficient remaining disk space (496871931904 B)
[2025-06-04 02:40:29] 2025-06-04 00:38:57,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:40:29] 2025-06-04 00:38:57,291 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:40:29] 2025-06-04 00:38:57,292 | INFO     | update_server=False
[2025-06-04 02:40:29] 2025-06-04 00:38:57,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:40:29] 2025-06-04 00:38:57,292 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:40:29] 2025-06-04 00:38:57,292 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:40:29] 2025-06-04 00:38:57,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:40:29] 2025-06-04 00:38:57,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:40:29] 2025-06-04 00:38:57,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:40:29] 2025-06-04 00:38:57,331 [wrapper] supervise_pilot (15 min periods counter: 21)
[2025-06-04 02:40:29] 2025-06-04 00:38:57,767 | INFO     | all job control threads have been joined
[2025-06-04 02:40:29] 2025-06-04 00:38:57,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:40:29] 2025-06-04 00:38:57,933 | INFO     | aborting loop
[2025-06-04 02:40:29] 2025-06-04 00:38:58,076 | INFO     | all payload control threads have been joined
[2025-06-04 02:40:29] 2025-06-04 00:38:58,298 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:58,331 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:58,348 | INFO     | [job] validate thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:58,406 | INFO     | all data control threads have been joined
[2025-06-04 02:40:29] 2025-06-04 00:38:58,638 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:58,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:40:29] 2025-06-04 00:38:58,773 | INFO     | [job] control thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:58,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:58,939 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,046 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,082 | INFO     | [payload] control thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,299 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,412 | INFO     | [data] control thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,601 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,609 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,734 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,783 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:38:59,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:40:29] 2025-06-04 00:39:03,851 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:40:29] 2025-06-04 00:39:04,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303245850432)>', '<ExcThread(monitor, started 140302648059648)>']
[2025-06-04 02:40:29] 2025-06-04 00:39:05,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:40:29] 2025-06-04 00:39:05,339 | INFO     | [monitor] control thread has ended
[2025-06-04 02:40:29] 2025-06-04 00:39:09,792 | INFO     | all workflow threads have been joined
[2025-06-04 02:40:29] 2025-06-04 00:39:09,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:40:29] 2025-06-04 00:39:09,793 | INFO     | traces error code: 0
[2025-06-04 02:40:29] 2025-06-04 00:39:09,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:40:29] 2025-06-04 00:39:10,204 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:40:29] 2025-06-04 00:39:10,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:40:29] 2025-06-04 00:39:10,399 [wrapper] pilotpid: 2069
[2025-06-04 02:40:29] 2025-06-04 00:39:10,466 [wrapper] Pilot exit status: 0
[2025-06-04 02:40:29] 2025-06-04 00:39:10,902 [wrapper] pandaids: 6665751696
[2025-06-04 02:40:29] 2025-06-04 00:39:11,877 [wrapper] cleanup supervisor_pilot  5532 2070
[2025-06-04 02:40:29] 2025-06-04 00:39:11,998 [wrapper] Test setup, not cleaning
[2025-06-04 02:40:29] 2025-06-04 00:39:12,116 [wrapper] apfmon messages muted
[2025-06-04 02:40:29] 2025-06-04 00:39:12,206 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:40:29] 2025-06-04 00:39:12,299 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:40:29]  *** Error codes and diagnostics ***
[2025-06-04 02:40:29]     "exeErrorCode": 0,
[2025-06-04 02:40:29]     "exeErrorDiag": "",
[2025-06-04 02:40:29]     "pilotErrorCode": 0,
[2025-06-04 02:40:29]     "pilotErrorDiag": "",
[2025-06-04 02:40:29]  *** Listing of results directory ***
[2025-06-04 02:40:29] total 423568
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc    495897 May 26 03:12 pilot3.tar.gz
[2025-06-04 02:40:29] -rwx------. 1 boinc boinc     37140 May 26 04:06 runpilot2-wrapper.sh
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc      5111 May 26 04:06 queuedata.json
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:40:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:04 run_atlas
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:04 job.xml
[2025-06-04 02:40:29] -rw-r--r--. 2 boinc boinc 225622427 Jun  3 21:04 EVNT.44871834._001759.pool.root.1
[2025-06-04 02:40:29] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:04 start_atlas.sh
[2025-06-04 02:40:29] drwxrwx--x. 2 boinc boinc        68 Jun  3 21:04 shared
[2025-06-04 02:40:29] -rw-r--r--. 2 boinc boinc    508880 Jun  3 21:04 input.tar.gz
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc      6393 Jun  3 21:04 init_data.xml
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:04 boinc_lockfile
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc      2556 Jun  3 21:35 pandaJob.out
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc    986893 Jun  3 21:38 agis_schedconf.cvmfs.json
[2025-06-04 02:40:29] drwx------. 4 boinc boinc      4096 Jun  3 21:38 pilot3
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc 200414431 Jun  4 02:36 HITS.44871837._044079.pool.root.1
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc       531 Jun  4 02:36 boinc_task_state.xml
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc      1019 Jun  4 02:37 memory_monitor_summary.json
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc   1603667 Jun  4 02:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc    402529 Jun  4 02:37 log.44871837._044079.job.log.tgz.1
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc        95 Jun  4 02:38 pilot_heartbeat.json
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc      7689 Jun  4 02:38 heartbeat.json
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc      4540 Jun  4 02:39 pilotlog.txt
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc   1535138 Jun  4 02:39 log.44871837._044079.job.log.1
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc       357 Jun  4 02:39 output.list
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc       620 Jun  4 02:39 runtime_log
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc   1955840 Jun  4 02:39 result.tar.gz
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc      8673 Jun  4 02:39 runtime_log.err
[2025-06-04 02:40:29] -rw-------. 1 boinc boinc       657 Jun  4 02:39 0UJLDmoPcd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSUPKDmcDAjwm.diag
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc      8192 Jun  4 02:40 boinc_mmap_file
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc        28 Jun  4 02:40 wrapper_checkpoint.txt
[2025-06-04 02:40:29] -rw-r--r--. 1 boinc boinc     20508 Jun  4 02:40 stderr.txt
[2025-06-04 02:40:30] HITS file was successfully produced:
[2025-06-04 02:40:30] -rw-------. 1 boinc boinc 200414431 Jun  4 02:36 shared/HITS.pool.root.1
[2025-06-04 02:40:30]  *** Contents of shared directory: ***
[2025-06-04 02:40:30] total 418484
[2025-06-04 02:40:30] -rw-r--r--. 2 boinc boinc 225622427 Jun  3 21:04 ATLAS.root_0
[2025-06-04 02:40:30] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:04 start_atlas.sh
[2025-06-04 02:40:30] -rw-r--r--. 2 boinc boinc    508880 Jun  3 21:04 input.tar.gz
[2025-06-04 02:40:30] -rw-------. 1 boinc boinc 200414431 Jun  4 02:36 HITS.pool.root.1
[2025-06-04 02:40:30] -rw-------. 1 boinc boinc   1955840 Jun  4 02:39 result.tar.gz
02:40:31 (15490): run_atlas exited; CPU time 64378.539921
02:40:31 (15490): called boinc_finish(0)

</stderr_txt>
]]>

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