Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:45:44 (3840056): wrapper (7.7.26015): starting
05:45:44 (3840056): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:45:44] Arguments: --nthreads 8
[2025-06-03 05:45:44] Threads: 8
[2025-06-03 05:45:44] Checking for CVMFS
[2025-06-03 05:45:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:45:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:45:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:45:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:45:44] 2.12.6.0 15283 29738 121572 146737 2 195 23022111 32503809 13012 16776704 0 368616009 99.687 289983197 36256 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 05:45:44] CVMFS is ok
[2025-06-03 05:45:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 05:45:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 05:45:44] Further information can be found at the LHC@home message board.
[2025-06-03 05:45:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:45:44] Checking for apptainer binary...
[2025-06-03 05:45:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:45:44] Running /usr/bin/apptainer --version
[2025-06-03 05:45:44] apptainer version 1.4.1-1.el9
[2025-06-03 05:45:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:45:44] c8-7-1.aglt2.org
[2025-06-03 05:45:44] apptainer works
[2025-06-03 05:45:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:45:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:45:44] Starting ATLAS job with PandaID=6677496531
[2025-06-03 05:45:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:39:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:39:16]  filetype=log
[2025-06-03 06:39:16]  guid=1cee468e-5342-48a9-9989-6455ddd617fc
[2025-06-03 06:39:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 06:39:16]  is_altstaged=None
[2025-06-03 06:39:16]  is_tar=False
[2025-06-03 06:39:16]  lfn=log.45006595._023315.job.log.tgz.1
[2025-06-03 06:39:16]  mtime=0
[2025-06-03 06:39:16]  protocol_id=None
[2025-06-03 06:39:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 06:39:16]  replicas=None
[2025-06-03 06:39:16]  scope=mc23_13p6TeV
[2025-06-03 06:39:16]  status=None
[2025-06-03 06:39:16]  status_code=0
[2025-06-03 06:39:16]  storage_token=
[2025-06-03 06:39:16]  surl=/tmp/boinchome/slots/13/PanDA_Pilot-6677496531/log.45006595._023315.job.log.tgz.1
[2025-06-03 06:39:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/cc/log.45006595._023315.job.log.tgz.1
[2025-06-03 06:39:16]  workdir=None
[2025-06-03 06:39:16] ]
[2025-06-03 06:39:16] 2025-06-03 10:38:49,933 | INFO     | transferring file log.45006595._023315.job.log.tgz.1 from /tmp/boinchome/slots/13/PanDA_Pilot-6677496531/log.45006595._023315.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-03 06:39:16] 2025-06-03 10:38:49,933 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/13/PanDA_Pilot-6677496531/log.45006595._023315.job.log.tgz.1 /tmp/boinchome/slots/13/log.45006595._023315.j
[2025-06-03 06:39:16] 2025-06-03 10:38:49,949 | INFO     | adding to output.list: log.45006595._023315.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/cc/log.45006595._023315.job.log.tg
[2025-06-03 06:39:16] 2025-06-03 10:38:49,949 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 06:39:16] 2025-06-03 10:38:49,949 | INFO     | summary of transferred files:
[2025-06-03 06:39:16] 2025-06-03 10:38:49,949 | INFO     |  -- lfn=log.45006595._023315.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 06:39:16] 2025-06-03 10:38:49,950 | INFO     | stage-out finished correctly
[2025-06-03 06:39:16] 2025-06-03 10:38:51,222 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 06:39:16] 2025-06-03 10:38:52,409 | INFO     | monitor loop #234: job 0:6677496531 is in state 'finished'
[2025-06-03 06:39:16] 2025-06-03 10:38:52,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:39:16] 2025-06-03 10:38:53,205 | INFO     | job 6677496531 has state=finished
[2025-06-03 06:39:16] 2025-06-03 10:38:53,205 | INFO     | preparing for final server update for job 6677496531 in state='finished'
[2025-06-03 06:39:16] 2025-06-03 10:38:53,205 | INFO     | this job has now completed (state=finished)
[2025-06-03 06:39:16] 2025-06-03 10:38:53,205 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 06:39:16] 2025-06-03 10:38:53,205 | INFO     | log transfer has been attempted: DONE
[2025-06-03 06:39:16] 2025-06-03 10:38:53,206 | INFO     | job 6677496531 has finished - writing final server update
[2025-06-03 06:39:16] 2025-06-03 10:38:53,206 | INFO     | total number of processed events: 400 (read)
[2025-06-03 06:39:16] 2025-06-03 10:38:53,224 | INFO     | executing command: lscpu
[2025-06-03 06:39:16] 2025-06-03 10:38:53,309 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 06:39:16] 2025-06-03 10:38:54,913 | INFO     | monitor loop #235: job 0:6677496531 is in state 'finished'
[2025-06-03 06:39:16] 2025-06-03 10:38:54,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:39:16] 2025-06-03 10:38:56,519 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 06:39:16] 2025-06-03 10:38:56,520 | INFO     | using path: /tmp/boinchome/slots/13/PanDA_Pilot-6677496531/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:39:16] 2025-06-03 10:38:56,520 | INFO     | extracted standard info from prmon json
[2025-06-03 06:39:16] 2025-06-03 10:38:56,520 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:39:16] 2025-06-03 10:38:56,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:39:16] 2025-06-03 10:38:56,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:39:16] 2025-06-03 10:38:56,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:39:16] 2025-06-03 10:38:56,521 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | sum of square deviations: 28242390.0
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | sum of deviations: 5503675651.0
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | mean x: 1748945623.0
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | mean y: 2082380.5777777778
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | -- intersect: -340819974117.7613
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | intersect: -340819974117.7613
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | chi2: 0.7257625610671994
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | -- intersect: -340819974117.7613
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | current memory leak: 194.87 B/s (using 45 data points, chi2=0.73)
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | ..............................
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | . Timing measurements:
[2025-06-03 06:39:16] 2025-06-03 10:38:56,522 | INFO     | . get job = 0 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,523 | INFO     | . initial setup = 2 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,523 | INFO     | . payload setup = 4 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,523 | INFO     | . stage-in = 0 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,523 | INFO     | . payload execution = 3153 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,523 | INFO     | . stage-out = 0 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,523 | INFO     | . log creation = 0 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,523 | INFO     | ..............................
[2025-06-03 06:39:16] 2025-06-03 10:38:56,579 | INFO     | 
[2025-06-03 06:39:16] 2025-06-03 10:38:56,579 | INFO     | job summary report
[2025-06-03 06:39:16] 2025-06-03 10:38:56,579 | INFO     | --------------------------------------------------
[2025-06-03 06:39:16] 2025-06-03 10:38:56,579 | INFO     | PanDA job id: 6677496531
[2025-06-03 06:39:16] 2025-06-03 10:38:56,579 | INFO     | task id: 45006595
[2025-06-03 06:39:16] 2025-06-03 10:38:56,579 | INFO     | errors: (none)
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | pilot state: finished 
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | transexitcode: 0
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | exeerrorcode: 0
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | exeerrordiag: 
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | exitcode: 0
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | exitmsg: OK
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | cpuconsumptiontime: 20033 s
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | nevents: 400
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | neventsw: 0
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | pid: 3868247
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | pgrp: 3868247
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | corecount: 8
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | event service: False
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | sizes: {0: 2404956, 1: 2405211, 4: 2405417, 11: 2405445, 3161: 2430862, 3162: 2439988, 3163: 2439988, 3169: 2440158}
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | --------------------------------------------------
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | 
[2025-06-03 06:39:16] 2025-06-03 10:38:56,580 | INFO     | executing command: ls -lF /tmp/boinchome/slots/13
[2025-06-03 06:39:16] 2025-06-03 10:38:56,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:39:16] 2025-06-03 10:38:56,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:39:16] 2025-06-03 10:38:56,600 | INFO     | job 6677496531 has completed (purged errors)
[2025-06-03 06:39:16] 2025-06-03 10:38:56,600 | INFO     | overall cleanup function is called
[2025-06-03 06:39:16] 2025-06-03 10:38:57,607 | INFO     | --- collectZombieJob: --- 10, [3868247]
[2025-06-03 06:39:16] 2025-06-03 10:38:57,607 | INFO     | zombie collector waiting for pid 3868247
[2025-06-03 06:39:16] 2025-06-03 10:38:57,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:39:16] 2025-06-03 10:38:57,607 | INFO     | collected zombie processes
[2025-06-03 06:39:16] 2025-06-03 10:38:57,607 | INFO     | will attempt to kill all subprocesses of pid=3868247
[2025-06-03 06:39:16] 2025-06-03 10:38:58,029 | INFO     | process IDs to be killed: [3868247] (in reverse order)
[2025-06-03 06:39:16] 2025-06-03 10:38:58,177 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:39:16] 2025-06-03 10:38:58,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:39:16] 2025-06-03 10:38:58,197 | INFO     | did not find any defunct processes belonging to 3868247
[2025-06-03 06:39:16] 2025-06-03 10:38:58,213 | INFO     | did not find any defunct processes belonging to 3868247
[2025-06-03 06:39:16] 2025-06-03 10:38:58,213 | INFO     | ready for new job
[2025-06-03 06:39:16] 2025-06-03 10:38:58,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:39:16] 2025-06-03 10:38:58,214 | INFO     | **************************************
[2025-06-03 06:39:16] 2025-06-03 10:38:58,214 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:39:16] 2025-06-03 10:38:58,214 | INFO     | **************************************
[2025-06-03 06:39:16] 2025-06-03 10:38:58,214 | INFO     | 
[2025-06-03 06:39:16] 2025-06-03 10:38:58,231 | INFO     | architecture information:
[2025-06-03 06:39:16] 2025-06-03 10:38:58,231 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:39:16] 2025-06-03 10:38:58,241 | INFO     | cat /etc/os-release:
[2025-06-03 06:39:16] NAME="CentOS Linux"
[2025-06-03 06:39:16] VERSION="7 (Core)"
[2025-06-03 06:39:16] ID="centos"
[2025-06-03 06:39:16] ID_LIKE="rhel fedora"
[2025-06-03 06:39:16] VERSION_ID="7"
[2025-06-03 06:39:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:39:16] ANSI_COLOR="0;31"
[2025-06-03 06:39:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:39:16] HOME_URL="https://www.centos.org/"
[2025-06-03 06:39:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:39:16] 
[2025-06-03 06:39:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:39:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:39:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:39:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:39:16] 
[2025-06-03 06:39:16] 2025-06-03 10:38:58,241 | INFO     | **************************************
[2025-06-03 06:39:16] 2025-06-03 10:38:58,744 | INFO     | executing command: df -mP /tmp/boinchome/slots/13
[2025-06-03 06:39:16] 2025-06-03 10:38:58,760 | INFO     | sufficient remaining disk space (87916806144 B)
[2025-06-03 06:39:16] 2025-06-03 10:38:58,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:39:16] 2025-06-03 10:38:58,760 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:39:16] 2025-06-03 10:38:58,760 | INFO     | update_server=False
[2025-06-03 06:39:16] 2025-06-03 10:38:58,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:39:16] 2025-06-03 10:38:58,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:39:16] 2025-06-03 10:38:58,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:39:16] 2025-06-03 10:38:58,761 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 06:39:16] 2025-06-03 10:38:58,762 | INFO     | aborting loop
[2025-06-03 06:39:16] 2025-06-03 10:38:58,762 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:39:16] 2025-06-03 10:38:58,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:39:16] 2025-06-03 10:38:58,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:39:16] 2025-06-03 10:38:59,591 | INFO     | all data control threads have been joined
[2025-06-03 06:39:16] 2025-06-03 10:38:59,766 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:38:59,766 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:38:59,781 | INFO     | [job] validate thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:38:59,914 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:38:59,968 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:38:59,985 | INFO     | all job control threads have been joined
[2025-06-03 06:39:16] 2025-06-03 10:39:00,085 | INFO     | all payload control threads have been joined
[2025-06-03 06:39:16] 2025-06-03 10:39:00,112 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:00,597 | INFO     | [data] control thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:00,618 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:00,767 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:00,820 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:00,990 | INFO     | [job] control thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:01,090 | INFO     | [payload] control thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:01,175 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:01,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:39:16] 2025-06-03 10:39:01,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:39:16] 2025-06-03 10:39:02,595 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:05,788 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:09,404 | INFO     | job.realtimelogging is not enabled
[2025-06-03 06:39:16] 2025-06-03 10:39:10,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:39:16] 2025-06-03 10:39:11,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976238044992)>', '<ExcThread(monitor, started 139975886608128)>']
[2025-06-03 06:39:16] 2025-06-03 10:39:11,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:39:16] 2025-06-03 10:39:11,815 | INFO     | [monitor] control thread has ended
[2025-06-03 06:39:16] 2025-06-03 10:39:16,657 | INFO     | all workflow threads have been joined
[2025-06-03 06:39:16] 2025-06-03 10:39:16,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:39:16] 2025-06-03 10:39:16,658 | INFO     | traces error code: 0
[2025-06-03 06:39:16] 2025-06-03 10:39:16,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:39:16] 2025-06-03 10:39:16,739 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:39:16] 2025-06-03 10:39:16,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:39:16] 2025-06-03 10:39:16,744 [wrapper] pilotpid: 3848044
[2025-06-03 06:39:16] 2025-06-03 10:39:16,746 [wrapper] Pilot exit status: 0
[2025-06-03 06:39:16] 2025-06-03 10:39:16,755 [wrapper] pandaids: 6677496531
[2025-06-03 06:39:16] 2025-06-03 10:39:16,856 [wrapper] cleanup supervisor_pilot  252245 3848045
[2025-06-03 06:39:16] 2025-06-03 10:39:16,859 [wrapper] Test setup, not cleaning
[2025-06-03 06:39:16] 2025-06-03 10:39:16,861 [wrapper] apfmon messages muted
[2025-06-03 06:39:16] 2025-06-03 10:39:16,863 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:39:16] 2025-06-03 10:39:16,865 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:39:16]  *** Error codes and diagnostics ***
[2025-06-03 06:39:16]     "exeErrorCode": 0,
[2025-06-03 06:39:16]     "exeErrorDiag": "",
[2025-06-03 06:39:16]     "pilotErrorCode": 0,
[2025-06-03 06:39:16]     "pilotErrorDiag": "",
[2025-06-03 06:39:16]  *** Listing of results directory ***
[2025-06-03 06:39:16] total 396144
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 03:01 pilot3.tar.gz
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 03:03 queuedata.json
[2025-06-03 06:39:16] -rwx------. 1 boincer umatlas     37140 Jun  3 03:04 runpilot2-wrapper.sh
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas       100 Jun  3 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:39:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 05:45 run_atlas
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas       105 Jun  3 05:45 job.xml
[2025-06-03 06:39:16] -rw-r--r--. 2 boincer umatlas 215089126 Jun  3 05:45 EVNT.45006593._000933.pool.root.1
[2025-06-03 06:39:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:45 start_atlas.sh
[2025-06-03 06:39:16] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 05:45 shared
[2025-06-03 06:39:16] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 05:45 input.tar.gz
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas         0 Jun  3 05:45 boinc_lockfile
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 05:45 pandaJob.out
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas    985490 Jun  3 05:45 agis_schedconf.cvmfs.json
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas   1603667 Jun  3 05:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:39:16] drwx------. 4 boincer umatlas      4096 Jun  3 05:45 pilot3
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas      7162 Jun  3 06:36 init_data.xml
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas        95 Jun  3 06:38 pilot_heartbeat.json
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas       530 Jun  3 06:38 boinc_task_state.xml
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas 185502200 Jun  3 06:38 HITS.45006595._023315.pool.root.1
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas      1033 Jun  3 06:38 memory_monitor_summary.json
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas    284868 Jun  3 06:38 log.45006595._023315.job.log.tgz.1
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas      7687 Jun  3 06:38 heartbeat.json
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas        27 Jun  3 06:39 wrapper_checkpoint.txt
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 06:39 boinc_mmap_file
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas      4549 Jun  3 06:39 pilotlog.txt
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas    328853 Jun  3 06:39 log.45006595._023315.job.log.1
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas       357 Jun  3 06:39 output.list
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas       620 Jun  3 06:39 runtime_log
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas    634880 Jun  3 06:39 result.tar.gz
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas       649 Jun  3 06:39 t56NDmJsag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNbiKDm6LO3Do.diag
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas      8663 Jun  3 06:39 runtime_log.err
[2025-06-03 06:39:16] -rw-r--r--. 1 boincer umatlas     21220 Jun  3 06:39 stderr.txt
[2025-06-03 06:39:16] HITS file was successfully produced:
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas 185502200 Jun  3 06:38 shared/HITS.pool.root.1
[2025-06-03 06:39:16]  *** Contents of shared directory: ***
[2025-06-03 06:39:16] total 392344
[2025-06-03 06:39:16] -rw-r--r--. 2 boincer umatlas 215089126 Jun  3 05:45 ATLAS.root_0
[2025-06-03 06:39:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:45 start_atlas.sh
[2025-06-03 06:39:16] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 05:45 input.tar.gz
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas 185502200 Jun  3 06:38 HITS.pool.root.1
[2025-06-03 06:39:16] -rw-------. 1 boincer umatlas    634880 Jun  3 06:39 result.tar.gz
06:39:18 (3840056): run_atlas exited; CPU time 20113.548960
06:39:18 (3840056): called boinc_finish(0)

</stderr_txt>
]]>

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