Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:46 (1692640): wrapper (7.7.26015): starting
05:40:46 (1692640): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:40:46] Arguments: --nthreads 8
[2025-06-03 05:40:46] Threads: 8
[2025-06-03 05:40:46] Checking for CVMFS
[2025-06-03 05:40:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:40:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:40:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:40:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:40:46] 2.12.6.0 5013 35704 587448 146737 2 197 22913139 32935936 12486 16776704 1 497456593 99.669 412754409 36174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 05:40:46] CVMFS is ok
[2025-06-03 05:40:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 05:40:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 05:40:46] Further information can be found at the LHC@home message board.
[2025-06-03 05:40:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:40:46] Checking for apptainer binary...
[2025-06-03 05:40:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:40:46] Running /usr/bin/apptainer --version
[2025-06-03 05:40:46] apptainer version 1.4.1-1.el9
[2025-06-03 05:40:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:40:46] c7-9-15.aglt2.org
[2025-06-03 05:40:46] apptainer works
[2025-06-03 05:40:46] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:40:46] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:40:46] Starting ATLAS job with PandaID=6677497451
[2025-06-03 05:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:30:12]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:30:12]  protocol_id=None
[2025-06-03 06:30:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 06:30:12]  replicas=None
[2025-06-03 06:30:12]  scope=mc23_13p6TeV
[2025-06-03 06:30:12]  status=None
[2025-06-03 06:30:12]  status_code=0
[2025-06-03 06:30:12]  storage_token=
[2025-06-03 06:30:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677497451/log.45006595._023424.job.log.tgz.1
[2025-06-03 06:30:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/61/log.45006595._023424.job.log.tgz.1
[2025-06-03 06:30:12]  workdir=None
[2025-06-03 06:30:12] ]
[2025-06-03 06:30:12] 2025-06-03 10:29:47,947 | INFO     | transferring file log.45006595._023424.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677497451/log.45006595._023424.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 06:30:12] 2025-06-03 10:29:47,948 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677497451/log.45006595._023424.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._023424.job
[2025-06-03 06:30:12] 2025-06-03 10:29:47,965 | INFO     | adding to output.list: log.45006595._023424.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/61/log.45006595._023424.job.log.tg
[2025-06-03 06:30:12] 2025-06-03 10:29:47,966 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 06:30:12] 2025-06-03 10:29:47,966 | INFO     | summary of transferred files:
[2025-06-03 06:30:12] 2025-06-03 10:29:47,966 | INFO     |  -- lfn=log.45006595._023424.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 06:30:12] 2025-06-03 10:29:47,966 | INFO     | stage-out finished correctly
[2025-06-03 06:30:12] 2025-06-03 10:29:48,574 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 06:30:12] 2025-06-03 10:29:49,166 | INFO     | job 6677497451 has state=finished
[2025-06-03 06:30:12] 2025-06-03 10:29:49,166 | INFO     | preparing for final server update for job 6677497451 in state='finished'
[2025-06-03 06:30:12] 2025-06-03 10:29:49,166 | INFO     | this job has now completed (state=finished)
[2025-06-03 06:30:12] 2025-06-03 10:29:49,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 06:30:12] 2025-06-03 10:29:49,166 | INFO     | log transfer has been attempted: DONE
[2025-06-03 06:30:12] 2025-06-03 10:29:49,166 | INFO     | job 6677497451 has finished - writing final server update
[2025-06-03 06:30:12] 2025-06-03 10:29:49,167 | INFO     | total number of processed events: 400 (read)
[2025-06-03 06:30:12] 2025-06-03 10:29:49,183 | INFO     | executing command: lscpu
[2025-06-03 06:30:12] 2025-06-03 10:29:49,269 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 06:30:12] 2025-06-03 10:29:52,455 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 06:30:12] 2025-06-03 10:29:52,456 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677497451/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:30:12] 2025-06-03 10:29:52,456 | INFO     | extracted standard info from prmon json
[2025-06-03 06:30:12] 2025-06-03 10:29:52,456 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:30:12] 2025-06-03 10:29:52,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:30:12] 2025-06-03 10:29:52,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:30:12] 2025-06-03 10:29:52,457 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | sum of square deviations: 21358540.0
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | sum of deviations: 4593378385.000001
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | mean x: 1748945202.0
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | mean y: 2090741.1219512196
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | -- intersect: -376126946515.9313
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | intersect: -376126946515.9313
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | chi2: 0.8595330671383486
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | -- intersect: -376126946515.9313
[2025-06-03 06:30:12] 2025-06-03 10:29:52,458 | INFO     | current memory leak: 215.06 B/s (using 41 data points, chi2=0.86)
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | ..............................
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . Timing measurements:
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . get job = 0 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . initial setup = 2 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . payload setup = 4 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . stage-in = 0 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . payload execution = 2910 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . stage-out = 0 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | . log creation = 0 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,459 | INFO     | ..............................
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | 
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | job summary report
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | --------------------------------------------------
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | PanDA job id: 6677497451
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | task id: 45006595
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | errors: (none)
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | pilot state: finished 
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | transexitcode: 0
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | exeerrorcode: 0
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | exeerrordiag: 
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | exitcode: 0
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | exitmsg: OK
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | cpuconsumptiontime: 18928 s
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | nevents: 400
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | neventsw: 0
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | pid: 1721464
[2025-06-03 06:30:12] 2025-06-03 10:29:52,514 | INFO     | pgrp: 1721464
[2025-06-03 06:30:12] 2025-06-03 10:29:52,515 | INFO     | corecount: 8
[2025-06-03 06:30:12] 2025-06-03 10:29:52,515 | INFO     | event service: False
[2025-06-03 06:30:12] 2025-06-03 10:29:52,515 | INFO     | sizes: {0: 2404955, 1: 2405210, 4: 2405416, 11: 2405444, 2919: 2430776, 2920: 2439717, 2921: 2439901, 2925: 2440071}
[2025-06-03 06:30:12] 2025-06-03 10:29:52,515 | INFO     | --------------------------------------------------
[2025-06-03 06:30:12] 2025-06-03 10:29:52,515 | INFO     | 
[2025-06-03 06:30:12] 2025-06-03 10:29:52,515 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | job 6677497451 has completed (purged errors)
[2025-06-03 06:30:12] 2025-06-03 10:29:52,532 | INFO     | overall cleanup function is called
[2025-06-03 06:30:12] 2025-06-03 10:29:53,536 | INFO     | --- collectZombieJob: --- 10, [1721464]
[2025-06-03 06:30:12] 2025-06-03 10:29:53,536 | INFO     | zombie collector waiting for pid 1721464
[2025-06-03 06:30:12] 2025-06-03 10:29:53,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:30:12] 2025-06-03 10:29:53,536 | INFO     | collected zombie processes
[2025-06-03 06:30:12] 2025-06-03 10:29:53,536 | INFO     | will attempt to kill all subprocesses of pid=1721464
[2025-06-03 06:30:12] 2025-06-03 10:29:54,200 | INFO     | process IDs to be killed: [1721464] (in reverse order)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,282 | WARNING  | process 1721464 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 06:30:12] 2025-06-03 10:29:54,323 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:30:12] 2025-06-03 10:29:54,369 | INFO     | did not find any defunct processes belonging to 1721464
[2025-06-03 06:30:12] 2025-06-03 10:29:54,413 | INFO     | did not find any defunct processes belonging to 1721464
[2025-06-03 06:30:12] 2025-06-03 10:29:54,413 | INFO     | ready for new job
[2025-06-03 06:30:12] 2025-06-03 10:29:54,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:30:12] 2025-06-03 10:29:54,414 | INFO     | **************************************
[2025-06-03 06:30:12] 2025-06-03 10:29:54,414 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:30:12] 2025-06-03 10:29:54,414 | INFO     | **************************************
[2025-06-03 06:30:12] 2025-06-03 10:29:54,414 | INFO     | 
[2025-06-03 06:30:12] 2025-06-03 10:29:54,432 | INFO     | architecture information:
[2025-06-03 06:30:12] 2025-06-03 10:29:54,432 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:30:12] 2025-06-03 10:29:54,447 | INFO     | cat /etc/os-release:
[2025-06-03 06:30:12] NAME="CentOS Linux"
[2025-06-03 06:30:12] VERSION="7 (Core)"
[2025-06-03 06:30:12] ID="centos"
[2025-06-03 06:30:12] ID_LIKE="rhel fedora"
[2025-06-03 06:30:12] VERSION_ID="7"
[2025-06-03 06:30:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:30:12] ANSI_COLOR="0;31"
[2025-06-03 06:30:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:30:12] HOME_URL="https://www.centos.org/"
[2025-06-03 06:30:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:30:12] 
[2025-06-03 06:30:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:30:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:30:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:30:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:30:12] 
[2025-06-03 06:30:12] 2025-06-03 10:29:54,447 | INFO     | **************************************
[2025-06-03 06:30:12] 2025-06-03 10:29:54,610 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,610 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,611 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6677497451/payload.stdout) since it has not been created yet
[2025-06-03 06:30:12] 2025-06-03 10:29:54,611 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 06:30:12] 2025-06-03 10:29:54,625 | INFO     | sufficient remaining disk space (68208820224 B)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,625 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-03 06:30:12] 2025-06-03 10:29:54,625 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6677497451/HITS.45006595._023424.pool.root.1 since it does not exist
[2025-06-03 06:30:12] 2025-06-03 10:29:54,950 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 06:30:12] 2025-06-03 10:29:54,965 | INFO     | sufficient remaining disk space (68208820224 B)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:30:12] 2025-06-03 10:29:54,966 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:30:12] 2025-06-03 10:29:54,966 | INFO     | update_server=False
[2025-06-03 06:30:12] 2025-06-03 10:29:54,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:30:12] 2025-06-03 10:29:54,966 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 06:30:12] 2025-06-03 10:29:54,967 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:30:12] 2025-06-03 10:29:54,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:30:12] 2025-06-03 10:29:54,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:30:12] 2025-06-03 10:29:54,975 | INFO     | number of running child processes to parent process 1721464: 1
[2025-06-03 06:30:12] 2025-06-03 10:29:54,975 | INFO     | maximum number of monitored processes: 6
[2025-06-03 06:30:12] 2025-06-03 10:29:54,975 | INFO     | aborting job monitoring since job object (job id=6677497451) has expired
[2025-06-03 06:30:12] 2025-06-03 10:29:54,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:30:12] 2025-06-03 10:29:54,976 | INFO     | will abort loop
[2025-06-03 06:30:12] 2025-06-03 10:29:55,249 | INFO     | all job control threads have been joined
[2025-06-03 06:30:12] 2025-06-03 10:29:55,309 | INFO     | all payload control threads have been joined
[2025-06-03 06:30:12] 2025-06-03 10:29:55,637 | INFO     | all data control threads have been joined
[2025-06-03 06:30:12] 2025-06-03 10:29:55,971 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:55,980 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:30:12] 2025-06-03 10:29:56,255 | INFO     | [job] control thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,291 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,314 | INFO     | [payload] control thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,501 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,620 | INFO     | [job] validate thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,643 | INFO     | [data] control thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,805 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,898 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:56,950 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:57,421 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:57,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:30:12] 2025-06-03 10:29:58,041 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:58,525 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:29:58,972 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:30:05,242 | INFO     | job.realtimelogging is not enabled
[2025-06-03 06:30:12] 2025-06-03 10:30:06,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:30:12] 2025-06-03 10:30:07,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747696092992)>', '<ExcThread(monitor, started 139747213170432)>']
[2025-06-03 06:30:12] 2025-06-03 10:30:08,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:30:12] 2025-06-03 10:30:08,016 | INFO     | [monitor] control thread has ended
[2025-06-03 06:30:12] 2025-06-03 10:30:12,680 | INFO     | all workflow threads have been joined
[2025-06-03 06:30:12] 2025-06-03 10:30:12,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:30:12] 2025-06-03 10:30:12,680 | INFO     | traces error code: 0
[2025-06-03 06:30:12] 2025-06-03 10:30:12,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:30:12] 2025-06-03 10:30:12,758 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:30:12] 2025-06-03 10:30:12,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:30:12] 2025-06-03 10:30:12,760 [wrapper] pilotpid: 1699830
[2025-06-03 06:30:12] 2025-06-03 10:30:12,762 [wrapper] Pilot exit status: 0
[2025-06-03 06:30:12] 2025-06-03 10:30:12,767 [wrapper] pandaids: 6677497451
[2025-06-03 06:30:12] 2025-06-03 10:30:12,827 [wrapper] cleanup supervisor_pilot 2396392 1699831
[2025-06-03 06:30:12] 2025-06-03 10:30:12,829 [wrapper] Test setup, not cleaning
[2025-06-03 06:30:12] 2025-06-03 10:30:12,832 [wrapper] apfmon messages muted
[2025-06-03 06:30:12] 2025-06-03 10:30:12,833 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:30:12] 2025-06-03 10:30:12,835 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:30:12]  *** Error codes and diagnostics ***
[2025-06-03 06:30:12]     "exeErrorCode": 0,
[2025-06-03 06:30:12]     "exeErrorDiag": "",
[2025-06-03 06:30:12]     "pilotErrorCode": 0,
[2025-06-03 06:30:12]     "pilotErrorDiag": "",
[2025-06-03 06:30:12]  *** Listing of results directory ***
[2025-06-03 06:30:12] total 388584
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 03:01 pilot3.tar.gz
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 03:02 queuedata.json
[2025-06-03 06:30:12] -rwx------. 1 boincer umatlas     37140 Jun  3 03:03 runpilot2-wrapper.sh
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas       100 Jun  3 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:30:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 05:40 run_atlas
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas       105 Jun  3 05:40 job.xml
[2025-06-03 06:30:12] -rw-r--r--. 2 boincer umatlas 213760504 Jun  3 05:40 EVNT.45006593._000937.pool.root.1
[2025-06-03 06:30:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 05:40 shared
[2025-06-03 06:30:12] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 05:40 input.tar.gz
[2025-06-03 06:30:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:40 start_atlas.sh
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas         0 Jun  3 05:40 boinc_lockfile
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 05:40 pandaJob.out
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas    985490 Jun  3 05:40 agis_schedconf.cvmfs.json
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas   1603667 Jun  3 05:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:30:12] drwx------. 4 boincer umatlas      4096 Jun  3 05:40 pilot3
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas      7161 Jun  3 06:29 init_data.xml
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas 179104303 Jun  3 06:29 HITS.45006595._023424.pool.root.1
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas       529 Jun  3 06:29 boinc_task_state.xml
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas      1032 Jun  3 06:29 memory_monitor_summary.json
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas    294242 Jun  3 06:29 log.45006595._023424.job.log.tgz.1
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas      7681 Jun  3 06:29 heartbeat.json
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas        95 Jun  3 06:29 pilot_heartbeat.json
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 06:30 boinc_mmap_file
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas        27 Jun  3 06:30 wrapper_checkpoint.txt
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas      5713 Jun  3 06:30 pilotlog.txt
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas    310382 Jun  3 06:30 log.45006595._023424.job.log.1
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas       357 Jun  3 06:30 output.list
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas       620 Jun  3 06:30 runtime_log
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas    624640 Jun  3 06:30 result.tar.gz
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas       650 Jun  3 06:30 W3JKDmBrag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIkXKDmUpODOo.diag
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 06:30 runtime_log.err
[2025-06-03 06:30:12] -rw-r--r--. 1 boincer umatlas     21880 Jun  3 06:30 stderr.txt
[2025-06-03 06:30:12] HITS file was successfully produced:
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas 179104303 Jun  3 06:29 shared/HITS.pool.root.1
[2025-06-03 06:30:12]  *** Contents of shared directory: ***
[2025-06-03 06:30:12] total 384796
[2025-06-03 06:30:12] -rw-r--r--. 2 boincer umatlas 213760504 Jun  3 05:40 ATLAS.root_0
[2025-06-03 06:30:12] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 05:40 input.tar.gz
[2025-06-03 06:30:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:40 start_atlas.sh
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas 179104303 Jun  3 06:29 HITS.pool.root.1
[2025-06-03 06:30:12] -rw-------. 1 boincer umatlas    624640 Jun  3 06:30 result.tar.gz
06:30:14 (1692640): run_atlas exited; CPU time 18997.405598
06:30:14 (1692640): called boinc_finish(0)

</stderr_txt>
]]>

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