Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:00:36 (22055): wrapper (7.7.26015): starting
22:00:36 (22055): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 22:00:36] Arguments: --nthreads 8
[2025-06-03 22:00:36] Threads: 8
[2025-06-03 22:00:36] Checking for CVMFS
[2025-06-03 22:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:00:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:00:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:00:39] 2.11.2.0 13342 32208 97340 146754 3 16 19427771 25165824 4271 130560 0 16429815 99.759 18004474 1982 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 22:00:39] CVMFS is ok
[2025-06-03 22:00:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:00:39] Checking for apptainer binary...
[2025-06-03 22:00:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:00:39] Running /usr/bin/apptainer --version
[2025-06-03 22:00:39] apptainer version 1.3.2-1.el7
[2025-06-03 22:00:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:00:49] cg-vwn278.simple-grid.lan
[2025-06-03 22:00:49] apptainer works
[2025-06-03 22:00:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 22:00:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 22:00:49] Starting ATLAS job with PandaID=6677495377
[2025-06-03 22:00:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:56:23]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:56:23] 2025-06-03 23:55:27,210 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677495377/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:56:23] 2025-06-03 23:55:27,210 | INFO     | extracted standard info from prmon json
[2025-06-04 01:56:23] 2025-06-03 23:55:27,210 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:56:23] 2025-06-03 23:55:27,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:56:23] 2025-06-03 23:55:27,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:56:23] 2025-06-03 23:55:27,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:56:23] 2025-06-03 23:55:27,216 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:56:23] 2025-06-03 23:55:27,216 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 01:56:23] 2025-06-03 23:55:27,218 | INFO     | sum of deviations: 106697727270.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,218 | INFO     | mean x: 1748988147.5
[2025-06-04 01:56:23] 2025-06-03 23:55:27,218 | INFO     | mean y: 2411078.229357798
[2025-06-04 01:56:23] 2025-06-03 23:55:27,218 | INFO     | -- intersect: -58087842044.539474
[2025-06-04 01:56:23] 2025-06-03 23:55:27,219 | INFO     | intersect: -58087842044.539474
[2025-06-04 01:56:23] 2025-06-03 23:55:27,219 | INFO     | chi2: 8.022572206149041
[2025-06-04 01:56:23] 2025-06-03 23:55:27,219 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,221 | INFO     | sum of deviations: 119609106830.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,221 | INFO     | mean x: 1748987995.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,222 | INFO     | mean y: 2419992.5211267606
[2025-06-04 01:56:23] 2025-06-03 23:55:27,222 | INFO     | -- intersect: -69811723477.7902
[2025-06-04 01:56:23] 2025-06-03 23:55:27,222 | INFO     | intersect: -69811723477.7902
[2025-06-04 01:56:23] 2025-06-03 23:55:27,222 | INFO     | chi2: 7.22278796281803
[2025-06-04 01:56:23] 2025-06-03 23:55:27,222 | INFO     | current chi2=7.22278796281803 (change=9.969174758165499 %)
[2025-06-04 01:56:23] 2025-06-03 23:55:27,222 | INFO     | right removable region: 212
[2025-06-04 01:56:23] 2025-06-03 23:55:27,226 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,228 | INFO     | sum of deviations: 31140375498.999985
[2025-06-04 01:56:23] 2025-06-03 23:55:27,228 | INFO     | mean x: 1748988300.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,228 | INFO     | mean y: 2464384.436619718
[2025-06-04 01:56:23] 2025-06-03 23:55:27,228 | INFO     | -- intersect: -18173735401.250496
[2025-06-04 01:56:23] 2025-06-03 23:55:27,228 | INFO     | intersect: -18173735401.250496
[2025-06-04 01:56:23] 2025-06-03 23:55:27,229 | INFO     | chi2: 2.989611500687382
[2025-06-04 01:56:23] 2025-06-03 23:55:27,229 | INFO     | current chi2=2.989611500687382 (change=62.73500039805262 %)
[2025-06-04 01:56:23] 2025-06-03 23:55:27,229 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,231 | INFO     | sum of deviations: -16118413049.5
[2025-06-04 01:56:23] 2025-06-03 23:55:27,231 | INFO     | mean x: 1748988452.5
[2025-06-04 01:56:23] 2025-06-03 23:55:27,231 | INFO     | mean y: 2499197.668269231
[2025-06-04 01:56:23] 2025-06-03 23:55:27,231 | INFO     | -- intersect: 10105510349.898506
[2025-06-04 01:56:23] 2025-06-03 23:55:27,231 | INFO     | intersect: 10105510349.898506
[2025-06-04 01:56:23] 2025-06-03 23:55:27,231 | INFO     | chi2: 0.9632373312843397
[2025-06-04 01:56:23] 2025-06-03 23:55:27,232 | INFO     | current chi2=0.9632373312843397 (change=67.78051826925106 %)
[2025-06-04 01:56:23] 2025-06-03 23:55:27,232 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,233 | INFO     | sum of deviations: -22568101863.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,234 | INFO     | mean x: 1748988605.0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,234 | INFO     | mean y: 2504170.3891625614
[2025-06-04 01:56:23] 2025-06-03 23:55:27,234 | INFO     | -- intersect: 15219398143.559357
[2025-06-04 01:56:23] 2025-06-03 23:55:27,234 | INFO     | intersect: 15219398143.559357
[2025-06-04 01:56:23] 2025-06-03 23:55:27,234 | INFO     | chi2: 0.9058810469406107
[2025-06-04 01:56:23] 2025-06-03 23:55:27,234 | INFO     | current chi2=0.9058810469406107 (change=5.954532956821 %)
[2025-06-04 01:56:23] 2025-06-03 23:55:27,234 | INFO     | left removable region: 30
[2025-06-04 01:56:23] 2025-06-03 23:55:27,235 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 01:56:23] 2025-06-03 23:55:27,236 | INFO     | sum of deviations: -9035628141.5
[2025-06-04 01:56:23] 2025-06-03 23:55:27,236 | INFO     | mean x: 1748988879.5
[2025-06-04 01:56:23] 2025-06-03 23:55:27,236 | INFO     | mean y: 2517503.0714285714
[2025-06-04 01:56:23] 2025-06-03 23:55:27,236 | INFO     | -- intersect: 8456589088.723146
[2025-06-04 01:56:23] 2025-06-03 23:55:27,237 | INFO     | intersect: 8456589088.723146
[2025-06-04 01:56:23] 2025-06-03 23:55:27,240 | INFO     | chi2: 0.00482936358431309
[2025-06-04 01:56:23] 2025-06-03 23:55:27,240 | INFO     | -- intersect: 8456589088.723146
[2025-06-04 01:56:23] 2025-06-03 23:55:27,241 | INFO     | current memory leak: -4.83 B/s (using 182 data points, chi2=0.00)
[2025-06-04 01:56:23] 2025-06-03 23:55:27,241 | INFO     | ..............................
[2025-06-04 01:56:23] 2025-06-03 23:55:27,241 | INFO     | . Timing measurements:
[2025-06-04 01:56:23] 2025-06-03 23:55:27,241 | INFO     | . get job = 0 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,242 | INFO     | . initial setup = 10 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,242 | INFO     | . payload setup = 127 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,242 | INFO     | . stage-in = 0 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,242 | INFO     | . payload execution = 13451 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,242 | INFO     | . stage-out = 11 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,242 | INFO     | . log creation = 1 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,242 | INFO     | ..............................
[2025-06-04 01:56:23] 2025-06-03 23:55:27,459 | INFO     | 
[2025-06-04 01:56:23] 2025-06-03 23:55:27,459 | INFO     | job summary report
[2025-06-04 01:56:23] 2025-06-03 23:55:27,459 | INFO     | --------------------------------------------------
[2025-06-04 01:56:23] 2025-06-03 23:55:27,459 | INFO     | PanDA job id: 6677495377
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | task id: 45006595
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | errors: (none)
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | pilot state: finished 
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | transexitcode: 0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | exeerrorcode: 0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | exeerrordiag: 
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | exitcode: 0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | exitmsg: OK
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | cpuconsumptiontime: 49740 s
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | nevents: 400
[2025-06-04 01:56:23] 2025-06-03 23:55:27,460 | INFO     | neventsw: 0
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | pid: 4686
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | pgrp: 4686
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | corecount: 8
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | event service: False
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 66: 2405506, 76: 2405534, 87: 2405590, 91: 2405824, 98: 2406132, 1
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | --------------------------------------------------
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | 
[2025-06-04 01:56:23] 2025-06-03 23:55:27,461 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 01:56:23] 2025-06-03 23:55:28,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:56:23] 2025-06-03 23:55:28,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:56:23] 2025-06-03 23:55:28,020 | INFO     | job 6677495377 has completed (purged errors)
[2025-06-04 01:56:23] 2025-06-03 23:55:28,020 | INFO     | overall cleanup function is called
[2025-06-04 01:56:23] 2025-06-03 23:55:29,029 | INFO     | --- collectZombieJob: --- 10, [4686]
[2025-06-04 01:56:23] 2025-06-03 23:55:29,029 | INFO     | zombie collector waiting for pid 4686
[2025-06-04 01:56:23] 2025-06-03 23:55:29,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:56:23] 2025-06-03 23:55:29,029 | INFO     | collected zombie processes
[2025-06-04 01:56:23] 2025-06-03 23:55:29,030 | INFO     | will attempt to kill all subprocesses of pid=4686
[2025-06-04 01:56:23] 2025-06-03 23:55:29,148 | INFO     | process IDs to be killed: [4686] (in reverse order)
[2025-06-04 01:56:23] 2025-06-03 23:55:29,963 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:56:23] 2025-06-03 23:55:29,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:56:23] 2025-06-03 23:55:29,967 | INFO     | did not find any defunct processes belonging to 4686
[2025-06-04 01:56:23] 2025-06-03 23:55:29,970 | INFO     | did not find any defunct processes belonging to 4686
[2025-06-04 01:56:23] 2025-06-03 23:55:29,971 | INFO     | ready for new job
[2025-06-04 01:56:23] 2025-06-03 23:55:29,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:56:23] 2025-06-03 23:55:29,976 | INFO     | **************************************
[2025-06-04 01:56:23] 2025-06-03 23:55:29,976 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:56:23] 2025-06-03 23:55:29,977 | INFO     | **************************************
[2025-06-04 01:56:23] 2025-06-03 23:55:29,977 | INFO     | 
[2025-06-04 01:56:23] 2025-06-03 23:55:29,977 | INFO     | pilot is running in a VM
[2025-06-04 01:56:23] 2025-06-03 23:55:29,977 | INFO     | architecture information:
[2025-06-04 01:56:23] 2025-06-03 23:55:29,991 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:56:23] 2025-06-03 23:55:30,216 | INFO     | cat /etc/os-release:
[2025-06-04 01:56:23] NAME="CentOS Linux"
[2025-06-04 01:56:23] VERSION="7 (Core)"
[2025-06-04 01:56:23] ID="centos"
[2025-06-04 01:56:23] ID_LIKE="rhel fedora"
[2025-06-04 01:56:23] VERSION_ID="7"
[2025-06-04 01:56:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:56:23] ANSI_COLOR="0;31"
[2025-06-04 01:56:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:56:23] HOME_URL="https://www.centos.org/"
[2025-06-04 01:56:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:56:23] 
[2025-06-04 01:56:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:56:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:56:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:56:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:56:23] 
[2025-06-04 01:56:23] 2025-06-03 23:55:30,217 | INFO     | **************************************
[2025-06-04 01:56:23] 2025-06-03 23:55:30,720 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 01:56:23] 2025-06-03 23:55:30,924 | INFO     | sufficient remaining disk space (496489201664 B)
[2025-06-04 01:56:23] 2025-06-03 23:55:30,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:56:23] 2025-06-03 23:55:30,925 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:56:23] 2025-06-03 23:55:30,925 | INFO     | update_server=False
[2025-06-04 01:56:23] 2025-06-03 23:55:30,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:56:23] 2025-06-03 23:55:30,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:56:23] 2025-06-03 23:55:30,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:56:23] 2025-06-03 23:55:30,929 | INFO     | aborting loop
[2025-06-04 01:56:23] 2025-06-03 23:55:31,543 | INFO     | all data control threads have been joined
[2025-06-04 01:56:23] 2025-06-03 23:55:31,701 | INFO     | all job control threads have been joined
[2025-06-04 01:56:23] 2025-06-03 23:55:31,853 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:56:23] 2025-06-03 23:55:31,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:56:23] 2025-06-03 23:55:31,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:56:23] 2025-06-03 23:55:31,921 | INFO     | all payload control threads have been joined
[2025-06-04 01:56:23] 2025-06-03 23:55:31,931 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:31,935 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,318 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,351 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:56:23] 2025-06-03 23:55:32,535 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,549 | INFO     | [data] control thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,552 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,704 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,707 | INFO     | [job] control thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,927 | INFO     | [payload] control thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,933 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:32,947 | INFO     | [job] validate thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:33,253 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:33,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:33,479 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:33,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:56:23] 2025-06-03 23:55:37,970 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:56:23] 2025-06-03 23:55:39,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118796793664)>', '<ExcThread(monitor, started 140118140647168)>']
[2025-06-04 01:56:23] 2025-06-03 23:55:39,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:56:23] 2025-06-03 23:55:39,900 | INFO     | [monitor] control thread has ended
[2025-06-04 01:56:23] 2025-06-03 23:55:44,064 | INFO     | all workflow threads have been joined
[2025-06-04 01:56:23] 2025-06-03 23:55:44,064 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:56:23] 2025-06-03 23:55:44,064 | INFO     | traces error code: 0
[2025-06-04 01:56:23] 2025-06-03 23:55:44,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:56:23] 2025-06-03 23:55:44,453 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:56:23] 2025-06-03 23:55:44,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:56:23] 2025-06-03 23:55:44,538 [wrapper] pilotpid: 26601
[2025-06-04 01:56:23] 2025-06-03 23:55:44,631 [wrapper] Pilot exit status: 0
[2025-06-04 01:56:23] 2025-06-03 23:55:44,998 [wrapper] pandaids: 6677495377
[2025-06-04 01:56:23] 2025-06-03 23:55:45,787 [wrapper] cleanup supervisor_pilot 17129 26602
[2025-06-04 01:56:23] 2025-06-03 23:55:45,842 [wrapper] Test setup, not cleaning
[2025-06-04 01:56:23] 2025-06-03 23:55:45,924 [wrapper] apfmon messages muted
[2025-06-04 01:56:23] 2025-06-03 23:55:45,984 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:56:23] 2025-06-03 23:55:46,030 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:56:23]  *** Error codes and diagnostics ***
[2025-06-04 01:56:23]     "exeErrorCode": 0,
[2025-06-04 01:56:23]     "exeErrorDiag": "",
[2025-06-04 01:56:23]     "pilotErrorCode": 0,
[2025-06-04 01:56:23]     "pilotErrorDiag": "",
[2025-06-04 01:56:23]  *** Listing of results directory ***
[2025-06-04 01:56:23] total 392000
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:33 pilot3.tar.gz
[2025-06-04 01:56:23] -rwx------. 1 boinc boinc     37140 Jun  3 08:42 runpilot2-wrapper.sh
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:42 queuedata.json
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc       100 Jun  3 22:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:56:23] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 22:00 run_atlas
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc       105 Jun  3 22:00 job.xml
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc      6391 Jun  3 22:00 init_data.xml
[2025-06-04 01:56:23] -rw-r--r--. 2 boinc boinc 216348906 Jun  3 22:00 EVNT.45006593._000906.pool.root.1
[2025-06-04 01:56:23] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:00 start_atlas.sh
[2025-06-04 01:56:23] drwxrwx--x. 2 boinc boinc        68 Jun  3 22:00 shared
[2025-06-04 01:56:23] -rw-r--r--. 2 boinc boinc    508876 Jun  3 22:00 input.tar.gz
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc         0 Jun  3 22:00 boinc_lockfile
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc      2524 Jun  3 22:00 pandaJob.out
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc    986893 Jun  3 22:04 agis_schedconf.cvmfs.json
[2025-06-04 01:56:23] drwx------. 4 boinc boinc      4096 Jun  3 22:04 pilot3
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc 178119862 Jun  4 01:52 HITS.45006595._022640.pool.root.1
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc       531 Jun  4 01:52 boinc_task_state.xml
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc      1017 Jun  4 01:53 memory_monitor_summary.json
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc   1603667 Jun  4 01:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc    377001 Jun  4 01:54 log.45006595._022640.job.log.tgz.1
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc      7694 Jun  4 01:55 heartbeat.json
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc        95 Jun  4 01:55 pilot_heartbeat.json
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc      4416 Jun  4 01:55 pilotlog.txt
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc   1180626 Jun  4 01:55 log.45006595._022640.job.log.1
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc       357 Jun  4 01:55 output.list
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc       620 Jun  4 01:55 runtime_log
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc   1576960 Jun  4 01:55 result.tar.gz
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc      8659 Jun  4 01:55 runtime_log.err
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc       657 Jun  4 01:55 k2hNDmRXag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2TiKDmqlvo1m.diag
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc      8192 Jun  4 01:56 boinc_mmap_file
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc        28 Jun  4 01:56 wrapper_checkpoint.txt
[2025-06-04 01:56:23] -rw-r--r--. 1 boinc boinc     20505 Jun  4 01:56 stderr.txt
[2025-06-04 01:56:23] HITS file was successfully produced:
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc 178119862 Jun  4 01:52 shared/HITS.pool.root.1
[2025-06-04 01:56:23]  *** Contents of shared directory: ***
[2025-06-04 01:56:23] total 387284
[2025-06-04 01:56:23] -rw-r--r--. 2 boinc boinc 216348906 Jun  3 22:00 ATLAS.root_0
[2025-06-04 01:56:23] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:00 start_atlas.sh
[2025-06-04 01:56:23] -rw-r--r--. 2 boinc boinc    508876 Jun  3 22:00 input.tar.gz
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc 178119862 Jun  4 01:52 HITS.pool.root.1
[2025-06-04 01:56:23] -rw-------. 1 boinc boinc   1576960 Jun  4 01:55 result.tar.gz
01:56:25 (22055): run_atlas exited; CPU time 49931.340542
01:56:25 (22055): called boinc_finish(0)

</stderr_txt>
]]>

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