Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:28:31 (2538767): wrapper (7.7.26015): starting
02:28:31 (2538767): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 02:28:31] Arguments: --nthreads 12
[2025-06-03 02:28:31] Threads: 12
[2025-06-03 02:28:31] Checking for CVMFS
[2025-06-03 02:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:28:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:28:32] 2.11.5.0 2907452 22255 232840 146737 1 525 35570216 45568001 13296 130560 0 283322616 99.851 140015399 28250 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 02:28:32] CVMFS is ok
[2025-06-03 02:28:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 02:28:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 02:28:32] Further information can be found at the LHC@home message board.
[2025-06-03 02:28:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:28:32] Checking for apptainer binary...
[2025-06-03 02:28:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:28:32] Running /usr/bin/apptainer --version
[2025-06-03 02:28:32] apptainer version 1.4.0-1.el9
[2025-06-03 02:28:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:28:32] wns0082.triumf.lcg
[2025-06-03 02:28:32] apptainer works
[2025-06-03 02:28:32] Set ATHENA_PROC_NUMBER=12
[2025-06-03 02:28:32] Set ATHENA_CORE_NUMBER=12
[2025-06-03 02:28:32] Starting ATLAS job with PandaID=6677545170
[2025-06-03 02:28:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:32:30]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | INFO     | extracted standard info from prmon json
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | found no stored workdir sizes
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | WARNING  | wrong length of table data, x=[1748942974.0], y=[1049.0] (must be same and length>=4)
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | ..............................
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . Timing measurements:
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . get job = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . initial setup = 3 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . payload setup = 11 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . stage-in = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . payload execution = 41 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . stage-out = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | . log creation = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | ..............................
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677545170/pilotlog.txt
[2025-06-03 02:32:30] 2025-06-03 09:32:15,850 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 02:32:30] - Log from pilotlog.txt -
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | INFO     | extracted standard info from prmon json
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | found no stored workdir sizes
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | WARNING  | wrong length of table data, x=[1748942974.0], y=[1049.0] (must be same and length>=4)
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | ..............................
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . Timing measurements:
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . get job = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . initial setup = 3 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . payload setup = 11 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . stage-in = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . payload execution = 41 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . stage-out = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | . log creation = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | ..............................
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677545170/pilotlog.txt
[2025-06-03 02:32:30] 2025-06-03 09:32:15,850 | WARNING  | 
[2025-06-03 02:32:30] [begin log extracts]
[2025-06-03 02:32:30] - Log from pilotlog.txt -
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | INFO     | extracted standard info from prmon json
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:32:30] 2025-06-03 09:32:15,835 | WARNING  | found no stored workdir sizes
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | WARNING  | wrong length of table data, x=[1748942974.0], y=[1049.0] (must be same and length>=4)
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | ..............................
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . Timing measurements:
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . get job = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . initial setup = 3 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . payload setup = 11 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . stage-in = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . payload execution = 41 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,836 | INFO     | . stage-out = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | . log creation = 0 s
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | ..............................
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 02:32:30] 2025-06-03 09:32:15,837 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677545170/pilotlog.txt
[2025-06-03 02:32:30] [end log extracts]
[2025-06-03 02:32:30] 2025-06-03 09:32:15,850 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 02:32:30] 2025-06-03 09:32:15,851 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 02:32:30] 2025-06-03 09:32:16,013 | INFO     | 
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | job summary report
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | --------------------------------------------------
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | PanDA job id: 6677545170
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | task id: 45006595
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 02:29:56,972 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | pilot state: failed 
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | transexitcode: 65
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | exeerrorcode: 65
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | exitcode: 65
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | nevents: 0
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | neventsw: 0
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | pid: 2548660
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | pgrp: 2548660
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | corecount: 12
[2025-06-03 02:32:30] 2025-06-03 09:32:16,014 | INFO     | event service: False
[2025-06-03 02:32:30] 2025-06-03 09:32:16,015 | INFO     | sizes: {0: 2405010, 1: 2405209, 11: 2405415, 12: 2405443, 57: 2428588, 58: 2428564, 59: 2432955, 61: 2432983, 188: 2433125}
[2025-06-03 02:32:30] 2025-06-03 09:32:16,015 | INFO     | --------------------------------------------------
[2025-06-03 02:32:30] 2025-06-03 09:32:16,015 | INFO     | 
[2025-06-03 02:32:30] 2025-06-03 09:32:16,015 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 02:32:30] 2025-06-03 09:32:16,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | job 6677545170 has completed (purged errors)
[2025-06-03 02:32:30] 2025-06-03 09:32:16,135 | INFO     | overall cleanup function is called
[2025-06-03 02:32:30] 2025-06-03 09:32:17,142 | INFO     | --- collectZombieJob: --- 10, [2548660]
[2025-06-03 02:32:30] 2025-06-03 09:32:17,142 | INFO     | zombie collector waiting for pid 2548660
[2025-06-03 02:32:30] 2025-06-03 09:32:17,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:32:30] 2025-06-03 09:32:17,142 | INFO     | collected zombie processes
[2025-06-03 02:32:30] 2025-06-03 09:32:17,142 | INFO     | will attempt to kill all subprocesses of pid=2548660
[2025-06-03 02:32:30] 2025-06-03 09:32:17,327 | INFO     | process IDs to be killed: [2548660] (in reverse order)
[2025-06-03 02:32:30] 2025-06-03 09:32:17,495 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:32:30] 2025-06-03 09:32:17,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:32:30] 2025-06-03 09:32:17,519 | INFO     | did not find any defunct processes belonging to 2548660
[2025-06-03 02:32:30] 2025-06-03 09:32:17,549 | INFO     | did not find any defunct processes belonging to 2548660
[2025-06-03 02:32:30] 2025-06-03 09:32:17,549 | INFO     | ready for new job
[2025-06-03 02:32:30] 2025-06-03 09:32:17,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:32:30] 2025-06-03 09:32:17,551 | INFO     | **************************************
[2025-06-03 02:32:30] 2025-06-03 09:32:17,551 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:32:30] 2025-06-03 09:32:17,551 | INFO     | **************************************
[2025-06-03 02:32:30] 2025-06-03 09:32:17,551 | INFO     | 
[2025-06-03 02:32:30] 2025-06-03 09:32:17,554 | INFO     | architecture information:
[2025-06-03 02:32:30] 2025-06-03 09:32:17,555 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:32:30] 2025-06-03 09:32:17,600 | INFO     | cat /etc/os-release:
[2025-06-03 02:32:30] NAME="CentOS Linux"
[2025-06-03 02:32:30] VERSION="7 (Core)"
[2025-06-03 02:32:30] ID="centos"
[2025-06-03 02:32:30] ID_LIKE="rhel fedora"
[2025-06-03 02:32:30] VERSION_ID="7"
[2025-06-03 02:32:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:32:30] ANSI_COLOR="0;31"
[2025-06-03 02:32:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:32:30] HOME_URL="https://www.centos.org/"
[2025-06-03 02:32:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:32:30] 
[2025-06-03 02:32:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:32:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:32:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:32:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:32:30] 
[2025-06-03 02:32:30] 2025-06-03 09:32:17,600 | INFO     | **************************************
[2025-06-03 02:32:30] 2025-06-03 09:32:18,102 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 02:32:30] 2025-06-03 09:32:18,117 | INFO     | sufficient remaining disk space (1987239215104 B)
[2025-06-03 02:32:30] 2025-06-03 09:32:18,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:32:30] 2025-06-03 09:32:18,117 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:32:30] 2025-06-03 09:32:18,117 | INFO     | update_server=False
[2025-06-03 02:32:30] 2025-06-03 09:32:18,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:32:30] 2025-06-03 09:32:18,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:32:30] 2025-06-03 09:32:18,256 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:32:30] 2025-06-03 09:32:18,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:32:30] 2025-06-03 09:32:18,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:32:30] 2025-06-03 09:32:18,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:32:30] 2025-06-03 09:32:18,409 | INFO     | aborting loop
[2025-06-03 02:32:30] 2025-06-03 09:32:18,482 | INFO     | all data control threads have been joined
[2025-06-03 02:32:30] 2025-06-03 09:32:18,776 | INFO     | all job control threads have been joined
[2025-06-03 02:32:30] 2025-06-03 09:32:18,885 | INFO     | all payload control threads have been joined
[2025-06-03 02:32:30] 2025-06-03 09:32:19,135 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:19,158 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:19,415 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:19,460 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:19,488 | INFO     | [data] control thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:19,732 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:19,781 | INFO     | [job] control thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:19,890 | INFO     | [payload] control thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:20,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:20,123 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:20,337 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:20,364 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:20,429 | INFO     | [job] validate thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:20,436 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:21,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:32:30] 2025-06-03 09:32:21,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:32:30] 2025-06-03 09:32:22,029 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:25,280 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:32:30] 2025-06-03 09:32:25,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285518907200)>', '<ExcThread(monitor, started 140285191358208)>']
[2025-06-03 02:32:30] 2025-06-03 09:32:26,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:32:30] 2025-06-03 09:32:26,301 | INFO     | [monitor] control thread has ended
[2025-06-03 02:32:30] 2025-06-03 09:32:30,527 | INFO     | all workflow threads have been joined
[2025-06-03 02:32:30] 2025-06-03 09:32:30,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:32:30] 2025-06-03 09:32:30,527 | INFO     | traces error code: 0
[2025-06-03 02:32:30] 2025-06-03 09:32:30,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:32:30] 2025-06-03 09:32:30,669 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:32:30] 2025-06-03 09:32:30,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:32:30] 2025-06-03 09:32:30,673 [wrapper] pilotpid: 2542333
[2025-06-03 02:32:30] 2025-06-03 09:32:30,675 [wrapper] Pilot exit status: 0
[2025-06-03 02:32:30] 2025-06-03 09:32:30,685 [wrapper] pandaids: 6677545170
[2025-06-03 02:32:30] 2025-06-03 09:32:30,733 [wrapper] cleanup supervisor_pilot 2542339 2542334
[2025-06-03 02:32:30] 2025-06-03 09:32:30,737 [wrapper] Test setup, not cleaning
[2025-06-03 02:32:30] 2025-06-03 09:32:30,740 [wrapper] apfmon messages muted
[2025-06-03 02:32:30] 2025-06-03 09:32:30,742 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:32:30] 2025-06-03 09:32:30,744 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:32:30]  *** Error codes and diagnostics ***
[2025-06-03 02:32:30]     "exeErrorCode": 65,
[2025-06-03 02:32:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 02:32:30]     "pilotErrorCode": 1305,
[2025-06-03 02:32:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 02:32:30]  *** Listing of results directory ***
[2025-06-03 02:32:30] total 215292
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:07 pilot3.tar.gz
[2025-06-03 02:32:30] -rwx------. 1 boinc boinc     37140 Jun  3 01:13 runpilot2-wrapper.sh
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc      5111 Jun  3 01:13 queuedata.json
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:32:30] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:28 run_atlas
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:28 job.xml
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc      6602 Jun  3 02:28 init_data.xml
[2025-06-03 02:32:30] -rw-r--r--. 2 boinc boinc 216434440 Jun  3 02:28 EVNT.45006593._001013.pool.root.1
[2025-06-03 02:32:30] -rw-r--r--. 2 boinc boinc    508877 Jun  3 02:28 input.tar.gz
[2025-06-03 02:32:30] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:28 start_atlas.sh
[2025-06-03 02:32:30] drwxrwx--x. 2 boinc boinc      4096 Jun  3 02:28 shared
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:28 boinc_lockfile
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc      2525 Jun  3 02:28 pandaJob.out
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc    985490 Jun  3 02:28 agis_schedconf.cvmfs.json
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc   1603667 Jun  3 02:28 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:32:30] drwx------. 4 boinc boinc      4096 Jun  3 02:28 pilot3
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc       522 Jun  3 02:29 boinc_task_state.xml
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc       972 Jun  3 02:30 memory_monitor_summary.json
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc     20796 Jun  3 02:30 log.45006595._025335.job.log.tgz.1
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc        95 Jun  3 02:31 pilot_heartbeat.json
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc      8313 Jun  3 02:32 heartbeat.json
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc        22 Jun  3 02:32 wrapper_checkpoint.txt
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc      4352 Jun  3 02:32 pilotlog.txt
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc     76057 Jun  3 02:32 log.45006595._025335.job.log.1
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc       188 Jun  3 02:32 output.list
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:32 runtime_log
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc    112640 Jun  3 02:32 result.tar.gz
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc      8484 Jun  3 02:32 runtime_log.err
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc       645 Jun  3 02:32 6zvMDmexbg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4wXKDmcWqoom.diag
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc      8192 Jun  3 02:32 boinc_mmap_file
[2025-06-03 02:32:30] -rw-r--r--. 1 boinc boinc     21468 Jun  3 02:32 stderr.txt
[2025-06-03 02:32:30] No HITS result produced
[2025-06-03 02:32:30]  *** Contents of shared directory: ***
[2025-06-03 02:32:30] total 211992
[2025-06-03 02:32:30] -rw-r--r--. 2 boinc boinc 216434440 Jun  3 02:28 ATLAS.root_0
[2025-06-03 02:32:30] -rw-r--r--. 2 boinc boinc    508877 Jun  3 02:28 input.tar.gz
[2025-06-03 02:32:30] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:28 start_atlas.sh
[2025-06-03 02:32:30] -rw-------. 1 boinc boinc    112640 Jun  3 02:32 result.tar.gz
02:32:32 (2538767): run_atlas exited; CPU time 23.426695
02:32:32 (2538767): called boinc_finish(0)

</stderr_txt>
]]>

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