Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:52:49 (3685): wrapper (7.7.26015): starting
18:52:49 (3685): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:52:49] Arguments: --nthreads 8
[2025-06-03 18:52:49] Threads: 8
[2025-06-03 18:52:49] Checking for CVMFS
[2025-06-03 18:52:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:52:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:52:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:52:52] 2.11.2.0 29033 32048 91032 146749 1 103 18125126 25165824 3906 130560 0 17261065 99.789 19596561 2104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 18:52:52] CVMFS is ok
[2025-06-03 18:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:52:52] Checking for apptainer binary...
[2025-06-03 18:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:52:52] Running /usr/bin/apptainer --version
[2025-06-03 18:52:52] apptainer version 1.3.2-1.el7
[2025-06-03 18:52:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:07:35] cg-vwn393.simple-grid.lan
[2025-06-03 20:07:35] apptainer works
[2025-06-03 20:07:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 20:07:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 20:07:35] Starting ATLAS job with PandaID=6677495744
[2025-06-03 20:07:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:16:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:16:31] 2025-06-03 21:42:04,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:16:31] 2025-06-03 21:42:04,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:16:31] 2025-06-03 21:42:04,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:16:31] 2025-06-03 21:42:04,205 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:16:31] 2025-06-03 21:42:04,206 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 00:16:31] 2025-06-03 21:42:04,208 | INFO     | sum of deviations: -46482226584.5
[2025-06-04 00:16:31] 2025-06-03 21:42:04,208 | INFO     | mean x: 1748980529.5
[2025-06-04 00:16:31] 2025-06-03 21:42:04,208 | INFO     | mean y: 2537108.1796116503
[2025-06-04 00:16:31] 2025-06-03 21:42:04,208 | INFO     | -- intersect: 29994303678.707485
[2025-06-04 00:16:31] 2025-06-03 21:42:04,208 | INFO     | intersect: 29994303678.707485
[2025-06-04 00:16:31] 2025-06-03 21:42:04,209 | INFO     | chi2: 2.654926812070242
[2025-06-04 00:16:31] 2025-06-03 21:42:04,209 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,211 | INFO     | sum of deviations: -30401573876.999996
[2025-06-04 00:16:31] 2025-06-03 21:42:04,211 | INFO     | mean x: 1748980377.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,211 | INFO     | mean y: 2549617.890547264
[2025-06-04 00:16:31] 2025-06-03 21:42:04,212 | INFO     | -- intersect: 21119206233.906902
[2025-06-04 00:16:31] 2025-06-03 21:42:04,212 | INFO     | intersect: 21119206233.906902
[2025-06-04 00:16:31] 2025-06-03 21:42:04,212 | INFO     | chi2: 1.809618650895313
[2025-06-04 00:16:31] 2025-06-03 21:42:04,212 | INFO     | current chi2=1.809618650895313 (change=31.83922650266129 %)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,213 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,214 | INFO     | sum of deviations: -28796360005.49999
[2025-06-04 00:16:31] 2025-06-03 21:42:04,214 | INFO     | mean x: 1748980224.5
[2025-06-04 00:16:31] 2025-06-03 21:42:04,215 | INFO     | mean y: 2550953.7704081633
[2025-06-04 00:16:31] 2025-06-03 21:42:04,215 | INFO     | -- intersect: 21574389467.734234
[2025-06-04 00:16:31] 2025-06-03 21:42:04,215 | INFO     | intersect: 21574389467.734234
[2025-06-04 00:16:31] 2025-06-03 21:42:04,215 | INFO     | chi2: 1.807963162571472
[2025-06-04 00:16:31] 2025-06-03 21:42:04,215 | INFO     | current chi2=1.807963162571472 (change=0.09148271781028697 %)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,215 | INFO     | right removable region: 195
[2025-06-04 00:16:31] 2025-06-03 21:42:04,216 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,217 | INFO     | sum of deviations: -80402623495.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,218 | INFO     | mean x: 1748980682.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,218 | INFO     | mean y: 2563695.3233830845
[2025-06-04 00:16:31] 2025-06-03 21:42:04,218 | INFO     | -- intersect: 55849504196.52114
[2025-06-04 00:16:31] 2025-06-03 21:42:04,218 | INFO     | intersect: 55849504196.52114
[2025-06-04 00:16:31] 2025-06-03 21:42:04,218 | INFO     | chi2: 1.0723831576619673
[2025-06-04 00:16:31] 2025-06-03 21:42:04,218 | INFO     | current chi2=1.0723831576619673 (change=59.60780716114162 %)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,219 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,220 | INFO     | sum of deviations: -77990748185.50002
[2025-06-04 00:16:31] 2025-06-03 21:42:04,221 | INFO     | mean x: 1748980834.5
[2025-06-04 00:16:31] 2025-06-03 21:42:04,221 | INFO     | mean y: 2561656.576530612
[2025-06-04 00:16:31] 2025-06-03 21:42:04,221 | INFO     | -- intersect: 58426765684.42344
[2025-06-04 00:16:31] 2025-06-03 21:42:04,221 | INFO     | intersect: 58426765684.42344
[2025-06-04 00:16:31] 2025-06-03 21:42:04,221 | INFO     | chi2: 1.058737007300573
[2025-06-04 00:16:31] 2025-06-03 21:42:04,221 | INFO     | current chi2=1.058737007300573 (change=1.2725069639424307 %)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,222 | INFO     | left removable region: 20
[2025-06-04 00:16:31] 2025-06-03 21:42:04,222 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,223 | INFO     | sum of deviations: -50176704547.000015
[2025-06-04 00:16:31] 2025-06-03 21:42:04,223 | INFO     | mean x: 1748980804.0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,224 | INFO     | mean y: 2568836.2285714285
[2025-06-04 00:16:31] 2025-06-03 21:42:04,224 | INFO     | -- intersect: 52811671612.390816
[2025-06-04 00:16:31] 2025-06-03 21:42:04,224 | INFO     | intersect: 52811671612.390816
[2025-06-04 00:16:31] 2025-06-03 21:42:04,224 | INFO     | chi2: 0.17350624445693055
[2025-06-04 00:16:31] 2025-06-03 21:42:04,224 | INFO     | -- intersect: 52811671612.390816
[2025-06-04 00:16:31] 2025-06-03 21:42:04,224 | INFO     | current memory leak: -30.19 B/s (using 175 data points, chi2=0.17)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,225 | INFO     | ..............................
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . Timing measurements:
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . get job = 0 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . initial setup = 2 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . payload setup = 14 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . stage-in = 0 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . payload execution = 12569 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . stage-out = 5 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | . log creation = 1 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,226 | INFO     | ..............................
[2025-06-04 00:16:31] 2025-06-03 21:42:04,666 | INFO     | 
[2025-06-04 00:16:31] 2025-06-03 21:42:04,667 | INFO     | job summary report
[2025-06-04 00:16:31] 2025-06-03 21:42:04,667 | INFO     | --------------------------------------------------
[2025-06-04 00:16:31] 2025-06-03 21:42:04,667 | INFO     | PanDA job id: 6677495744
[2025-06-04 00:16:31] 2025-06-03 21:42:04,667 | INFO     | task id: 45006595
[2025-06-04 00:16:31] 2025-06-03 21:42:04,667 | INFO     | errors: (none)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:16:31] 2025-06-03 21:42:04,667 | INFO     | pilot state: finished 
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | transexitcode: 0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | exeerrorcode: 0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | exeerrordiag: 
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | exitcode: 0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | exitmsg: OK
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | cpuconsumptiontime: 47447 s
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | nevents: 400
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | neventsw: 0
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | pid: 21789
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | pgrp: 21789
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | corecount: 8
[2025-06-04 00:16:31] 2025-06-03 21:42:04,668 | INFO     | event service: False
[2025-06-04 00:16:31] 2025-06-03 21:42:04,669 | INFO     | sizes: {0: 2404960, 1: 2405159, 10: 2405365, 12: 2405393, 12587: 2434591, 12593: 2443716, 12682: 2443830}
[2025-06-04 00:16:31] 2025-06-03 21:42:04,669 | INFO     | --------------------------------------------------
[2025-06-04 00:16:31] 2025-06-03 21:42:04,669 | INFO     | 
[2025-06-04 00:16:31] 2025-06-03 21:42:04,669 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 00:16:31] 2025-06-03 21:42:04,995 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,995 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,995 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:16:31] 2025-06-03 21:42:04,997 | INFO     | job 6677495744 has completed (purged errors)
[2025-06-04 00:16:31] 2025-06-03 21:42:04,998 | INFO     | overall cleanup function is called
[2025-06-04 00:16:31] 2025-06-03 21:42:05,352 | INFO     | PID=15233 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 00:16:31] 2025-06-03 21:42:05,353 | INFO     | .. there are 9 such processes running
[2025-06-04 00:16:31] 2025-06-03 21:42:06,006 | INFO     | --- collectZombieJob: --- 10, [21789]
[2025-06-04 00:16:31] 2025-06-03 21:42:06,007 | INFO     | zombie collector waiting for pid 21789
[2025-06-04 00:16:31] 2025-06-03 21:42:06,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:16:31] 2025-06-03 21:42:06,007 | INFO     | collected zombie processes
[2025-06-04 00:16:31] 2025-06-03 21:42:06,007 | INFO     | will attempt to kill all subprocesses of pid=21789
[2025-06-04 00:16:31] 2025-06-03 21:42:06,110 | INFO     | process IDs to be killed: [21789] (in reverse order)
[2025-06-04 00:16:31] 2025-06-03 21:42:07,171 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:16:31] 2025-06-03 21:42:07,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:16:31] 2025-06-03 21:42:07,175 | INFO     | did not find any defunct processes belonging to 21789
[2025-06-04 00:16:31] 2025-06-03 21:42:07,179 | INFO     | did not find any defunct processes belonging to 21789
[2025-06-04 00:16:31] 2025-06-03 21:42:07,179 | INFO     | ready for new job
[2025-06-04 00:16:31] 2025-06-03 21:42:07,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:16:31] 2025-06-03 21:42:07,181 | INFO     | **************************************
[2025-06-04 00:16:31] 2025-06-03 21:42:07,181 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:16:31] 2025-06-03 21:42:07,181 | INFO     | **************************************
[2025-06-04 00:16:31] 2025-06-03 21:42:07,181 | INFO     | 
[2025-06-04 00:16:31] 2025-06-03 21:42:07,182 | INFO     | pilot is running in a VM
[2025-06-04 00:16:31] 2025-06-03 21:42:07,182 | INFO     | architecture information:
[2025-06-04 00:16:31] 2025-06-03 21:42:07,186 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:16:31] 2025-06-03 21:42:07,392 | INFO     | cat /etc/os-release:
[2025-06-04 00:16:31] NAME="CentOS Linux"
[2025-06-04 00:16:31] VERSION="7 (Core)"
[2025-06-04 00:16:31] ID="centos"
[2025-06-04 00:16:31] ID_LIKE="rhel fedora"
[2025-06-04 00:16:31] VERSION_ID="7"
[2025-06-04 00:16:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:16:31] ANSI_COLOR="0;31"
[2025-06-04 00:16:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:16:31] HOME_URL="https://www.centos.org/"
[2025-06-04 00:16:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:16:31] 
[2025-06-04 00:16:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:16:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:16:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:16:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:16:31] 
[2025-06-04 00:16:31] 2025-06-03 21:42:07,392 | INFO     | **************************************
[2025-06-04 00:16:31] 2025-06-03 21:42:07,896 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 00:16:31] 2025-06-03 21:42:08,167 | INFO     | sufficient remaining disk space (496715694080 B)
[2025-06-04 00:16:31] 2025-06-03 21:42:08,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:16:31] 2025-06-03 21:42:08,168 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:16:31] 2025-06-03 21:42:08,168 | INFO     | update_server=False
[2025-06-04 00:16:31] 2025-06-03 21:42:08,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:16:31] 2025-06-03 21:42:08,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:16:31] 2025-06-03 21:42:08,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:16:31] 2025-06-03 21:42:08,171 | INFO     | aborting loop
[2025-06-04 00:16:31] 2025-06-03 21:42:08,173 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:16:31] 2025-06-03 21:42:08,173 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:16:31] 2025-06-03 21:42:08,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:16:31] 2025-06-03 21:42:08,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:16:31] 2025-06-03 21:42:08,396 | INFO     | all data control threads have been joined
[2025-06-04 00:16:31] 2025-06-03 21:42:08,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:16:31] 2025-06-03 21:42:08,763 | INFO     | all job control threads have been joined
[2025-06-04 00:16:31] 2025-06-03 21:42:09,175 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,177 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,357 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:16:31] 2025-06-03 21:42:09,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,402 | INFO     | [data] control thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,492 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,505 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,657 | INFO     | all payload control threads have been joined
[2025-06-04 00:16:31] 2025-06-03 21:42:09,770 | INFO     | [job] control thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,883 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:09,938 | INFO     | [job] validate thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:10,124 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:10,398 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:10,516 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:10,665 | INFO     | [payload] control thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:10,725 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:12,179 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:16:31] 2025-06-03 21:42:13,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295347001152)>', '<ExcThread(monitor, started 140295120103168)>']
[2025-06-04 00:16:31] 2025-06-03 21:42:13,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:16:31] 2025-06-03 21:42:13,204 | INFO     | [monitor] control thread has ended
[2025-06-04 00:16:31] 2025-06-03 21:42:18,136 | INFO     | all workflow threads have been joined
[2025-06-04 00:16:31] 2025-06-03 21:42:18,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:16:31] 2025-06-03 21:42:18,137 | INFO     | traces error code: 0
[2025-06-04 00:16:31] 2025-06-03 21:42:18,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:16:31] 2025-06-03 21:42:18,475 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:16:31] 2025-06-03 21:42:18,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:16:31] 2025-06-03 21:42:18,638 [wrapper] pilotpid: 15233
[2025-06-04 00:16:31] 2025-06-03 21:42:18,692 [wrapper] Pilot exit status: 0
[2025-06-04 00:16:31] 2025-06-03 21:42:18,969 [wrapper] pandaids: 6677495744
[2025-06-04 00:16:31] 2025-06-03 21:42:19,846 [wrapper] cleanup supervisor_pilot 29992 15234
[2025-06-04 00:16:31] 2025-06-03 21:42:19,908 [wrapper] Test setup, not cleaning
[2025-06-04 00:16:31] 2025-06-03 21:42:19,957 [wrapper] apfmon messages muted
[2025-06-04 00:16:31] 2025-06-03 21:42:20,039 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:16:31] 2025-06-03 21:42:20,143 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:16:31]  *** Error codes and diagnostics ***
[2025-06-04 00:16:31]     "exeErrorCode": 0,
[2025-06-04 00:16:31]     "exeErrorDiag": "",
[2025-06-04 00:16:31]     "pilotErrorCode": 0,
[2025-06-04 00:16:31]     "pilotErrorDiag": "",
[2025-06-04 00:16:31]  *** Listing of results directory ***
[2025-06-04 00:16:31] total 382816
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:46 queuedata.json
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:46 pilot3.tar.gz
[2025-06-04 00:16:31] -rwx------. 1 boinc boinc     37140 Jun  3 08:47 runpilot2-wrapper.sh
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc       100 Jun  3 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:16:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 18:52 run_atlas
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc       105 Jun  3 18:52 job.xml
[2025-06-04 00:16:31] -rw-r--r--. 2 boinc boinc 214676679 Jun  3 18:52 EVNT.45006593._000916.pool.root.1
[2025-06-04 00:16:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:52 start_atlas.sh
[2025-06-04 00:16:31] drwxrwx--x. 2 boinc boinc        68 Jun  3 18:52 shared
[2025-06-04 00:16:31] -rw-r--r--. 2 boinc boinc    508873 Jun  3 18:52 input.tar.gz
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc      6392 Jun  3 18:52 init_data.xml
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc         0 Jun  3 18:52 boinc_lockfile
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc      2523 Jun  3 20:07 pandaJob.out
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc    985078 Jun  3 20:10 agis_schedconf.cvmfs.json
[2025-06-04 00:16:31] drwx------. 4 boinc boinc      4096 Jun  3 20:10 pilot3
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc 170573722 Jun  3 23:39 HITS.45006595._022889.pool.root.1
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc       531 Jun  3 23:39 boinc_task_state.xml
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc      1015 Jun  3 23:40 memory_monitor_summary.json
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc   1603667 Jun  3 23:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc    366401 Jun  3 23:40 log.45006595._022889.job.log.tgz.1
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc        95 Jun  3 23:41 pilot_heartbeat.json
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc      7688 Jun  3 23:42 heartbeat.json
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc      4539 Jun  3 23:42 pilotlog.txt
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc   1101545 Jun  3 23:42 log.45006595._022889.job.log.1
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc       357 Jun  3 23:42 output.list
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc       620 Jun  3 23:42 runtime_log
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc   1484800 Jun  3 23:42 result.tar.gz
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc       656 Jun  3 23:42 UpsKDmWbag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2WiKDmcpVUCn.diag
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc      8659 Jun  3 23:42 runtime_log.err
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc      8192 Jun  4 00:16 boinc_mmap_file
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc        28 Jun  4 00:16 wrapper_checkpoint.txt
[2025-06-04 00:16:31] -rw-r--r--. 1 boinc boinc     20567 Jun  4 00:16 stderr.txt
[2025-06-04 00:16:31] HITS file was successfully produced:
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc 170573722 Jun  3 23:39 shared/HITS.pool.root.1
[2025-06-04 00:16:31]  *** Contents of shared directory: ***
[2025-06-04 00:16:31] total 378192
[2025-06-04 00:16:31] -rw-r--r--. 2 boinc boinc 214676679 Jun  3 18:52 ATLAS.root_0
[2025-06-04 00:16:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:52 start_atlas.sh
[2025-06-04 00:16:31] -rw-r--r--. 2 boinc boinc    508873 Jun  3 18:52 input.tar.gz
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc 170573722 Jun  3 23:39 HITS.pool.root.1
[2025-06-04 00:16:31] -rw-------. 1 boinc boinc   1484800 Jun  3 23:42 result.tar.gz
00:16:32 (3685): run_atlas exited; CPU time 47609.558881
00:16:32 (3685): called boinc_finish(0)

</stderr_txt>
]]>

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