Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:52 (2792793): wrapper (7.7.26015): starting
05:20:52 (2792793): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:20:52] Arguments: --nthreads 8
[2025-06-03 05:20:52] Threads: 8
[2025-06-03 05:20:52] Checking for CVMFS
[2025-06-03 05:20:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:20:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:20:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:20:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:20:52] 2.12.6.0 6121 113955 338084 146737 3 56 24792754 32935937 3664 130560 2 447695424 99.687 381779761 22806 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 05:20:52] CVMFS is ok
[2025-06-03 05:20:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 05:20:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 05:20:52] Further information can be found at the LHC@home message board.
[2025-06-03 05:20:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:20:52] Checking for apptainer binary...
[2025-06-03 05:20:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:20:52] Running /usr/bin/apptainer --version
[2025-06-03 05:20:52] apptainer version 1.4.1-1.el9
[2025-06-03 05:20:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:20:52] c-8-1.aglt2.org
[2025-06-03 05:20:52] apptainer works
[2025-06-03 05:20:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:20:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:20:52] Starting ATLAS job with PandaID=6677470086
[2025-06-03 05:20:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:46:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:46:25]  protocol_id=None
[2025-06-03 06:46:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 06:46:25]  replicas=None
[2025-06-03 06:46:25]  scope=mc23_13p6TeV
[2025-06-03 06:46:25]  status=None
[2025-06-03 06:46:25]  status_code=0
[2025-06-03 06:46:25]  storage_token=
[2025-06-03 06:46:25]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677470086/log.45006595._020405.job.log.tgz.1
[2025-06-03 06:46:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/45/log.45006595._020405.job.log.tgz.1
[2025-06-03 06:46:25]  workdir=None
[2025-06-03 06:46:25] ]
[2025-06-03 06:46:25] 2025-06-03 10:45:54,432 | INFO     | transferring file log.45006595._020405.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677470086/log.45006595._020405.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 06:46:25] 2025-06-03 10:45:54,433 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677470086/log.45006595._020405.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._020405.job
[2025-06-03 06:46:25] 2025-06-03 10:45:54,450 | INFO     | adding to output.list: log.45006595._020405.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/45/log.45006595._020405.job.log.tg
[2025-06-03 06:46:25] 2025-06-03 10:45:54,452 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 06:46:25] 2025-06-03 10:45:54,452 | INFO     | summary of transferred files:
[2025-06-03 06:46:25] 2025-06-03 10:45:54,452 | INFO     |  -- lfn=log.45006595._020405.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 06:46:25] 2025-06-03 10:45:54,452 | INFO     | stage-out finished correctly
[2025-06-03 06:46:25] 2025-06-03 10:45:56,668 | WARNING  | process 2803437 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 06:46:25] 2025-06-03 10:45:56,668 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677470086/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:46:25] 2025-06-03 10:45:56,919 | INFO     | number of running child processes to parent process 2803437: 1
[2025-06-03 06:46:25] 2025-06-03 10:45:56,920 | INFO     | maximum number of monitored processes: 6
[2025-06-03 06:46:25] 2025-06-03 10:45:57,522 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 06:46:25] 2025-06-03 10:45:59,423 | INFO     | monitor loop #376: job 0:6677470086 is in state 'finished'
[2025-06-03 06:46:25] 2025-06-03 10:45:59,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:46:25] 2025-06-03 10:46:00,599 | INFO     | job 6677470086 has state=finished
[2025-06-03 06:46:25] 2025-06-03 10:46:00,600 | INFO     | preparing for final server update for job 6677470086 in state='finished'
[2025-06-03 06:46:25] 2025-06-03 10:46:00,600 | INFO     | this job has now completed (state=finished)
[2025-06-03 06:46:25] 2025-06-03 10:46:00,601 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 06:46:25] 2025-06-03 10:46:00,601 | INFO     | log transfer has been attempted: DONE
[2025-06-03 06:46:25] 2025-06-03 10:46:00,601 | INFO     | job 6677470086 has finished - writing final server update
[2025-06-03 06:46:25] 2025-06-03 10:46:00,601 | INFO     | total number of processed events: 400 (read)
[2025-06-03 06:46:25] 2025-06-03 10:46:00,616 | INFO     | executing command: lscpu
[2025-06-03 06:46:25] 2025-06-03 10:46:00,671 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 06:46:25] 2025-06-03 10:46:01,926 | INFO     | monitor loop #377: job 0:6677470086 is in state 'finished'
[2025-06-03 06:46:25] 2025-06-03 10:46:01,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:46:25] 2025-06-03 10:46:04,236 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 06:46:25] 2025-06-03 10:46:04,236 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677470086/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:46:25] 2025-06-03 10:46:04,237 | INFO     | extracted standard info from prmon json
[2025-06-03 06:46:25] 2025-06-03 10:46:04,237 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:46:25] 2025-06-03 10:46:04,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:46:25] 2025-06-03 10:46:04,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:46:25] 2025-06-03 10:46:04,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:46:25] 2025-06-03 10:46:04,240 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:46:25] 2025-06-03 10:46:04,240 | INFO     | sum of square deviations: 136095575.0
[2025-06-03 06:46:25] 2025-06-03 10:46:04,241 | INFO     | sum of deviations: 2916909864.4999995
[2025-06-03 06:46:25] 2025-06-03 10:46:04,241 | INFO     | mean x: 1748945080.5
[2025-06-03 06:46:25] 2025-06-03 10:46:04,241 | INFO     | mean y: 2135906.4342105263
[2025-06-03 06:46:25] 2025-06-03 10:46:04,241 | INFO     | -- intersect: -37482662242.06691
[2025-06-03 06:46:25] 2025-06-03 10:46:04,241 | INFO     | intersect: -37482662242.06691
[2025-06-03 06:46:25] 2025-06-03 10:46:04,242 | INFO     | chi2: 0.9596448182033905
[2025-06-03 06:46:25] 2025-06-03 10:46:04,242 | INFO     | -- intersect: -37482662242.06691
[2025-06-03 06:46:25] 2025-06-03 10:46:04,242 | INFO     | current memory leak: 21.43 B/s (using 76 data points, chi2=0.96)
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | ..............................
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . Timing measurements:
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . get job = 0 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . initial setup = 2 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . payload setup = 6 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . stage-in = 0 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . payload execution = 5064 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . stage-out = 0 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,243 | INFO     | . log creation = 0 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,244 | INFO     | ..............................
[2025-06-03 06:46:25] 2025-06-03 10:46:04,620 | INFO     | 
[2025-06-03 06:46:25] 2025-06-03 10:46:04,620 | INFO     | job summary report
[2025-06-03 06:46:25] 2025-06-03 10:46:04,620 | INFO     | --------------------------------------------------
[2025-06-03 06:46:25] 2025-06-03 10:46:04,620 | INFO     | PanDA job id: 6677470086
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | task id: 45006595
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | errors: (none)
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | pilot state: finished 
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | transexitcode: 0
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | exeerrorcode: 0
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | exeerrordiag: 
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | exitcode: 0
[2025-06-03 06:46:25] 2025-06-03 10:46:04,621 | INFO     | exitmsg: OK
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | cpuconsumptiontime: 35007 s
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | nevents: 400
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | neventsw: 0
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | pid: 2803437
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | pgrp: 2803437
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | corecount: 8
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | event service: False
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | sizes: {0: 2405176, 1: 2405176, 4: 2405410, 11: 2405438, 5074: 2431686, 5076: 2440627, 5079: 2440811, 5086: 2440981}
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | --------------------------------------------------
[2025-06-03 06:46:25] 2025-06-03 10:46:04,622 | INFO     | 
[2025-06-03 06:46:25] 2025-06-03 10:46:04,623 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 06:46:25] 2025-06-03 10:46:04,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:46:25] 2025-06-03 10:46:04,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:46:25] 2025-06-03 10:46:04,643 | INFO     | job 6677470086 has completed (purged errors)
[2025-06-03 06:46:25] 2025-06-03 10:46:04,643 | INFO     | overall cleanup function is called
[2025-06-03 06:46:25] 2025-06-03 10:46:05,649 | INFO     | --- collectZombieJob: --- 10, [2803437]
[2025-06-03 06:46:25] 2025-06-03 10:46:05,650 | INFO     | zombie collector waiting for pid 2803437
[2025-06-03 06:46:25] 2025-06-03 10:46:05,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:46:25] 2025-06-03 10:46:05,650 | INFO     | collected zombie processes
[2025-06-03 06:46:25] 2025-06-03 10:46:05,650 | INFO     | will attempt to kill all subprocesses of pid=2803437
[2025-06-03 06:46:25] 2025-06-03 10:46:05,906 | INFO     | process IDs to be killed: [2803437] (in reverse order)
[2025-06-03 06:46:25] 2025-06-03 10:46:05,976 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:46:25] 2025-06-03 10:46:05,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:46:25] 2025-06-03 10:46:05,985 | INFO     | did not find any defunct processes belonging to 2803437
[2025-06-03 06:46:25] 2025-06-03 10:46:05,992 | INFO     | did not find any defunct processes belonging to 2803437
[2025-06-03 06:46:25] 2025-06-03 10:46:05,992 | INFO     | ready for new job
[2025-06-03 06:46:25] 2025-06-03 10:46:05,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:46:25] 2025-06-03 10:46:05,994 | INFO     | **************************************
[2025-06-03 06:46:25] 2025-06-03 10:46:05,994 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:46:25] 2025-06-03 10:46:05,994 | INFO     | **************************************
[2025-06-03 06:46:25] 2025-06-03 10:46:05,994 | INFO     | 
[2025-06-03 06:46:25] 2025-06-03 10:46:06,008 | INFO     | architecture information:
[2025-06-03 06:46:25] 2025-06-03 10:46:06,009 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:46:25] 2025-06-03 10:46:06,022 | INFO     | cat /etc/os-release:
[2025-06-03 06:46:25] NAME="CentOS Linux"
[2025-06-03 06:46:25] VERSION="7 (Core)"
[2025-06-03 06:46:25] ID="centos"
[2025-06-03 06:46:25] ID_LIKE="rhel fedora"
[2025-06-03 06:46:25] VERSION_ID="7"
[2025-06-03 06:46:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:46:25] ANSI_COLOR="0;31"
[2025-06-03 06:46:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:46:25] HOME_URL="https://www.centos.org/"
[2025-06-03 06:46:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:46:25] 
[2025-06-03 06:46:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:46:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:46:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:46:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:46:25] 
[2025-06-03 06:46:25] 2025-06-03 10:46:06,022 | INFO     | **************************************
[2025-06-03 06:46:25] 2025-06-03 10:46:06,525 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 06:46:25] 2025-06-03 10:46:06,539 | INFO     | sufficient remaining disk space (74240229376 B)
[2025-06-03 06:46:25] 2025-06-03 10:46:06,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:46:25] 2025-06-03 10:46:06,540 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:46:25] 2025-06-03 10:46:06,540 | INFO     | update_server=False
[2025-06-03 06:46:25] 2025-06-03 10:46:06,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:46:25] 2025-06-03 10:46:06,555 | INFO     | all payload control threads have been joined
[2025-06-03 06:46:25] 2025-06-03 10:46:06,907 | INFO     | PID=2796368 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 06:46:25] 2025-06-03 10:46:06,907 | INFO     | .. there are 5 such processes running
[2025-06-03 06:46:25] 2025-06-03 10:46:06,907 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:46:25] 2025-06-03 10:46:06,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:46:25] 2025-06-03 10:46:06,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:46:25] 2025-06-03 10:46:06,931 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 06:46:25] 2025-06-03 10:46:06,931 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 06:46:25] 2025-06-03 10:46:06,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:46:25] 2025-06-03 10:46:06,931 | INFO     | will abort loop
[2025-06-03 06:46:25] 2025-06-03 10:46:07,403 | INFO     | all data control threads have been joined
[2025-06-03 06:46:25] 2025-06-03 10:46:07,545 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:07,560 | INFO     | [payload] control thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:07,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:46:25] 2025-06-03 10:46:07,761 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:07,894 | INFO     | all job control threads have been joined
[2025-06-03 06:46:25] 2025-06-03 10:46:07,936 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,014 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:46:25] 2025-06-03 10:46:08,254 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,357 | INFO     | [job] validate thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,408 | INFO     | [data] control thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,618 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,855 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,899 | INFO     | [job] control thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:08,986 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:09,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:46:25] 2025-06-03 10:46:09,582 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:10,368 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:12,151 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:17,523 | INFO     | job.realtimelogging is not enabled
[2025-06-03 06:46:25] 2025-06-03 10:46:18,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:46:25] 2025-06-03 10:46:20,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336792631104)>', '<ExcThread(monitor, started 140336168953600)>']
[2025-06-03 06:46:25] 2025-06-03 10:46:20,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:46:25] 2025-06-03 10:46:20,978 | INFO     | [monitor] control thread has ended
[2025-06-03 06:46:25] 2025-06-03 10:46:25,089 | INFO     | all workflow threads have been joined
[2025-06-03 06:46:25] 2025-06-03 10:46:25,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:46:25] 2025-06-03 10:46:25,089 | INFO     | traces error code: 0
[2025-06-03 06:46:25] 2025-06-03 10:46:25,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:46:25] 2025-06-03 10:46:25,196 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:46:25] 2025-06-03 10:46:25,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:46:25] 2025-06-03 10:46:25,201 [wrapper] pilotpid: 2796368
[2025-06-03 06:46:25] 2025-06-03 10:46:25,203 [wrapper] Pilot exit status: 0
[2025-06-03 06:46:25] 2025-06-03 10:46:25,213 [wrapper] pandaids: 6677470086
[2025-06-03 06:46:25] 2025-06-03 10:46:25,261 [wrapper] cleanup supervisor_pilot 2984820 2796369
[2025-06-03 06:46:25] 2025-06-03 10:46:25,263 [wrapper] Test setup, not cleaning
[2025-06-03 06:46:25] 2025-06-03 10:46:25,266 [wrapper] apfmon messages muted
[2025-06-03 06:46:25] 2025-06-03 10:46:25,268 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:46:25] 2025-06-03 10:46:25,270 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:46:25]  *** Error codes and diagnostics ***
[2025-06-03 06:46:25]     "exeErrorCode": 0,
[2025-06-03 06:46:25]     "exeErrorDiag": "",
[2025-06-03 06:46:25]     "pilotErrorCode": 0,
[2025-06-03 06:46:25]     "pilotErrorDiag": "",
[2025-06-03 06:46:25]  *** Listing of results directory ***
[2025-06-03 06:46:25] total 381316
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:53 pilot3.tar.gz
[2025-06-03 06:46:25] -rwx------. 1 boincer umatlas     37140 Jun  3 01:11 runpilot2-wrapper.sh
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 01:11 queuedata.json
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas       100 Jun  3 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:46:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 05:20 run_atlas
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas       105 Jun  3 05:20 job.xml
[2025-06-03 06:46:25] -rw-r--r--. 2 boincer umatlas 215626069 Jun  3 05:20 EVNT.45006593._000817.pool.root.1
[2025-06-03 06:46:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:20 start_atlas.sh
[2025-06-03 06:46:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 05:20 shared
[2025-06-03 06:46:25] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 05:20 input.tar.gz
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas         0 Jun  3 05:20 boinc_lockfile
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas      2521 Jun  3 05:20 pandaJob.out
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas    985490 Jun  3 05:21 agis_schedconf.cvmfs.json
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas   1603667 Jun  3 05:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:46:25] drwx------. 4 boincer umatlas      4096 Jun  3 05:21 pilot3
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas      6657 Jun  3 06:38 init_data.xml
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas 169419605 Jun  3 06:45 HITS.45006595._020405.pool.root.1
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas       529 Jun  3 06:45 boinc_task_state.xml
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas        95 Jun  3 06:45 pilot_heartbeat.json
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas      1032 Jun  3 06:45 memory_monitor_summary.json
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas    294385 Jun  3 06:45 log.45006595._020405.job.log.tgz.1
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas      7698 Jun  3 06:46 heartbeat.json
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 06:46 boinc_mmap_file
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas        27 Jun  3 06:46 wrapper_checkpoint.txt
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas      5006 Jun  3 06:46 pilotlog.txt
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas    496573 Jun  3 06:46 log.45006595._020405.job.log.1
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas       357 Jun  3 06:46 output.list
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas       620 Jun  3 06:46 runtime_log
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas    808960 Jun  3 06:46 result.tar.gz
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 06:46 runtime_log.err
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas       649 Jun  3 06:46 i6aLDmP7Yg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnRXKDmGwEfhn.diag
[2025-06-03 06:46:25] -rw-r--r--. 1 boincer umatlas     21794 Jun  3 06:46 stderr.txt
[2025-06-03 06:46:25] HITS file was successfully produced:
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas 169419605 Jun  3 06:45 shared/HITS.pool.root.1
[2025-06-03 06:46:25]  *** Contents of shared directory: ***
[2025-06-03 06:46:25] total 377344
[2025-06-03 06:46:25] -rw-r--r--. 2 boincer umatlas 215626069 Jun  3 05:20 ATLAS.root_0
[2025-06-03 06:46:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:20 start_atlas.sh
[2025-06-03 06:46:25] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 05:20 input.tar.gz
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas 169419605 Jun  3 06:45 HITS.pool.root.1
[2025-06-03 06:46:25] -rw-------. 1 boincer umatlas    808960 Jun  3 06:46 result.tar.gz
06:46:26 (2792793): run_atlas exited; CPU time 35154.536912
06:46:26 (2792793): called boinc_finish(0)

</stderr_txt>
]]>

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