Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:06:14 (8653): wrapper (7.7.26015): starting
17:06:14 (8653): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:06:14] Arguments: --nthreads 8
[2025-06-03 17:06:14] Threads: 8
[2025-06-03 17:06:14] Checking for CVMFS
[2025-06-03 17:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:06:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:06:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:06:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:06:17] 2.11.2.0 19945 32107 97648 146743 0 262 15542168 25165824 4644 130560 0 16572672 99.751 19598343 2132 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:06:17] CVMFS is ok
[2025-06-03 17:06:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:06:17] Checking for apptainer binary...
[2025-06-03 17:06:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:06:17] Running /usr/bin/apptainer --version
[2025-06-03 17:06:17] apptainer version 1.3.2-1.el7
[2025-06-03 17:06:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:16:12] cg-vwn324.simple-grid.lan
[2025-06-03 17:16:12] apptainer works
[2025-06-03 17:16:12] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:16:12] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:16:12] Starting ATLAS job with PandaID=6677495073
[2025-06-03 17:16:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:06:02]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:06:02] 2025-06-03 19:13:23,447 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:06:02] 2025-06-03 19:13:23,447 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:06:02] 2025-06-03 19:13:23,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:06:02] 2025-06-03 19:13:23,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:06:02] 2025-06-03 19:13:23,453 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:06:02] 2025-06-03 19:13:23,453 | INFO     | sum of square deviations: 3772712597.5
[2025-06-03 23:06:02] 2025-06-03 19:13:23,455 | INFO     | sum of deviations: -9959878395.000004
[2025-06-03 23:06:02] 2025-06-03 19:13:23,455 | INFO     | mean x: 1748970829.5
[2025-06-03 23:06:02] 2025-06-03 19:13:23,456 | INFO     | mean y: 2495471.695652174
[2025-06-03 23:06:02] 2025-06-03 19:13:23,456 | INFO     | -- intersect: 4619740047.856952
[2025-06-03 23:06:02] 2025-06-03 19:13:23,456 | INFO     | intersect: 4619740047.856952
[2025-06-03 23:06:02] 2025-06-03 19:13:23,456 | INFO     | chi2: 2.5611479440438756
[2025-06-03 23:06:02] 2025-06-03 19:13:23,457 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,458 | INFO     | sum of deviations: 5740995358.000014
[2025-06-03 23:06:02] 2025-06-03 19:13:23,459 | INFO     | mean x: 1748970677.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,459 | INFO     | mean y: 2505248.4266666668
[2025-06-03 23:06:02] 2025-06-03 19:13:23,459 | INFO     | -- intersect: -2840334141.7292786
[2025-06-03 23:06:02] 2025-06-03 19:13:23,459 | INFO     | intersect: -2840334141.7292786
[2025-06-03 23:06:02] 2025-06-03 19:13:23,469 | INFO     | chi2: 1.7891548208207098
[2025-06-03 23:06:02] 2025-06-03 19:13:23,470 | INFO     | current chi2=1.7891548208207098 (change=30.142465023095934 %)
[2025-06-03 23:06:02] 2025-06-03 19:13:23,470 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,472 | INFO     | sum of deviations: 6081231337.000005
[2025-06-03 23:06:02] 2025-06-03 19:13:23,472 | INFO     | mean x: 1748970524.5
[2025-06-03 23:06:02] 2025-06-03 19:13:23,472 | INFO     | mean y: 2505473.727272727
[2025-06-03 23:06:02] 2025-06-03 19:13:23,473 | INFO     | -- intersect: -3218834203.39795
[2025-06-03 23:06:02] 2025-06-03 19:13:23,473 | INFO     | intersect: -3218834203.39795
[2025-06-03 23:06:02] 2025-06-03 19:13:23,473 | INFO     | chi2: 1.7900509490418768
[2025-06-03 23:06:02] 2025-06-03 19:13:23,473 | INFO     | current chi2=1.7900509490418768 (change=-0.05008667839913143 %)
[2025-06-03 23:06:02] 2025-06-03 19:13:23,473 | INFO     | right removable region: 219
[2025-06-03 23:06:02] 2025-06-03 19:13:23,474 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,475 | INFO     | sum of deviations: -50616273109.000015
[2025-06-03 23:06:02] 2025-06-03 19:13:23,476 | INFO     | mean x: 1748970982.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,476 | INFO     | mean y: 2521026.351111111
[2025-06-03 23:06:02] 2025-06-03 19:13:23,476 | INFO     | -- intersect: 25066808854.080933
[2025-06-03 23:06:02] 2025-06-03 19:13:23,476 | INFO     | intersect: 25066808854.080933
[2025-06-03 23:06:02] 2025-06-03 19:13:23,476 | INFO     | chi2: 0.9056038908236492
[2025-06-03 23:06:02] 2025-06-03 19:13:23,476 | INFO     | current chi2=0.9056038908236492 (change=64.64070367626779 %)
[2025-06-03 23:06:02] 2025-06-03 19:13:23,477 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,479 | INFO     | sum of deviations: -55462707066.000046
[2025-06-03 23:06:02] 2025-06-03 19:13:23,479 | INFO     | mean x: 1748971134.5
[2025-06-03 23:06:02] 2025-06-03 19:13:23,479 | INFO     | mean y: 2524202.309090909
[2025-06-03 23:06:02] 2025-06-03 19:13:23,479 | INFO     | -- intersect: 29382146730.288372
[2025-06-03 23:06:02] 2025-06-03 19:13:23,479 | INFO     | intersect: 29382146730.288372
[2025-06-03 23:06:02] 2025-06-03 19:13:23,479 | INFO     | chi2: 0.8542492241138331
[2025-06-03 23:06:02] 2025-06-03 19:13:23,480 | INFO     | current chi2=0.8542492241138331 (change=5.670764804589005 %)
[2025-06-03 23:06:02] 2025-06-03 19:13:23,480 | INFO     | left removable region: 20
[2025-06-03 23:06:02] 2025-06-03 19:13:23,480 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,481 | INFO     | sum of deviations: -33727214637.999996
[2025-06-03 23:06:02] 2025-06-03 19:13:23,482 | INFO     | mean x: 1748971104.0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,482 | INFO     | mean y: 2532924.095477387
[2025-06-03 23:06:02] 2025-06-03 19:13:23,482 | INFO     | -- intersect: 24142486157.589184
[2025-06-03 23:06:02] 2025-06-03 19:13:23,482 | INFO     | intersect: 24142486157.589184
[2025-06-03 23:06:02] 2025-06-03 19:13:23,482 | INFO     | chi2: 0.05584020944938264
[2025-06-03 23:06:02] 2025-06-03 19:13:23,482 | INFO     | -- intersect: 24142486157.589184
[2025-06-03 23:06:02] 2025-06-03 19:13:23,482 | INFO     | current memory leak: -13.80 B/s (using 199 data points, chi2=0.06)
[2025-06-03 23:06:02] 2025-06-03 19:13:23,483 | INFO     | ..............................
[2025-06-03 23:06:02] 2025-06-03 19:13:23,483 | INFO     | . Timing measurements:
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | . get job = 0 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | . initial setup = 2 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | . payload setup = 11 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | . stage-in = 0 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | . payload execution = 14042 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | . stage-out = 4 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | . log creation = 1 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,484 | INFO     | ..............................
[2025-06-03 23:06:02] 2025-06-03 19:13:23,708 | INFO     | 
[2025-06-03 23:06:02] 2025-06-03 19:13:23,709 | INFO     | job summary report
[2025-06-03 23:06:02] 2025-06-03 19:13:23,709 | INFO     | --------------------------------------------------
[2025-06-03 23:06:02] 2025-06-03 19:13:23,709 | INFO     | PanDA job id: 6677495073
[2025-06-03 23:06:02] 2025-06-03 19:13:23,709 | INFO     | task id: 45006595
[2025-06-03 23:06:02] 2025-06-03 19:13:23,709 | INFO     | errors: (none)
[2025-06-03 23:06:02] 2025-06-03 19:13:23,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | pilot state: finished 
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | transexitcode: 0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | exeerrorcode: 0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | exeerrordiag: 
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | exitcode: 0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | exitmsg: OK
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | cpuconsumptiontime: 52926 s
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | nevents: 400
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | neventsw: 0
[2025-06-03 23:06:02] 2025-06-03 19:13:23,710 | INFO     | pid: 27415
[2025-06-03 23:06:02] 2025-06-03 19:13:23,711 | INFO     | pgrp: 27415
[2025-06-03 23:06:02] 2025-06-03 19:13:23,711 | INFO     | corecount: 8
[2025-06-03 23:06:02] 2025-06-03 19:13:23,711 | INFO     | event service: False
[2025-06-03 23:06:02] 2025-06-03 19:13:23,711 | INFO     | sizes: {0: 2405176, 1: 2405204, 9: 2405410, 12: 2405438, 14058: 2435338, 14059: 2435337, 14063: 2444462, 14066: 2444518, 14191: 2444688}
[2025-06-03 23:06:02] 2025-06-03 19:13:23,711 | INFO     | --------------------------------------------------
[2025-06-03 23:06:02] 2025-06-03 19:13:23,711 | INFO     | 
[2025-06-03 23:06:02] 2025-06-03 19:13:23,711 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 23:06:02] 2025-06-03 19:13:24,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:06:02] 2025-06-03 19:13:24,092 | INFO     | job 6677495073 has completed (purged errors)
[2025-06-03 23:06:02] 2025-06-03 19:13:24,092 | INFO     | overall cleanup function is called
[2025-06-03 23:06:02] 2025-06-03 19:13:25,101 | INFO     | --- collectZombieJob: --- 10, [27415]
[2025-06-03 23:06:02] 2025-06-03 19:13:25,102 | INFO     | zombie collector waiting for pid 27415
[2025-06-03 23:06:02] 2025-06-03 19:13:25,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:06:02] 2025-06-03 19:13:25,102 | INFO     | collected zombie processes
[2025-06-03 23:06:02] 2025-06-03 19:13:25,102 | INFO     | will attempt to kill all subprocesses of pid=27415
[2025-06-03 23:06:02] 2025-06-03 19:13:25,227 | INFO     | process IDs to be killed: [27415] (in reverse order)
[2025-06-03 23:06:02] 2025-06-03 19:13:25,772 | INFO     | PID=18825 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 23:06:02] 2025-06-03 19:13:25,773 | INFO     | .. there are 9 such processes running
[2025-06-03 23:06:02] 2025-06-03 19:13:26,133 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:06:02] 2025-06-03 19:13:26,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:06:02] 2025-06-03 19:13:26,142 | INFO     | did not find any defunct processes belonging to 27415
[2025-06-03 23:06:02] 2025-06-03 19:13:26,146 | INFO     | did not find any defunct processes belonging to 27415
[2025-06-03 23:06:02] 2025-06-03 19:13:26,147 | INFO     | ready for new job
[2025-06-03 23:06:02] 2025-06-03 19:13:26,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:06:02] 2025-06-03 19:13:26,149 | INFO     | **************************************
[2025-06-03 23:06:02] 2025-06-03 19:13:26,149 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:06:02] 2025-06-03 19:13:26,149 | INFO     | **************************************
[2025-06-03 23:06:02] 2025-06-03 19:13:26,149 | INFO     | 
[2025-06-03 23:06:02] 2025-06-03 19:13:26,150 | INFO     | pilot is running in a VM
[2025-06-03 23:06:02] 2025-06-03 19:13:26,150 | INFO     | architecture information:
[2025-06-03 23:06:02] 2025-06-03 19:13:26,155 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:06:02] 2025-06-03 19:13:26,421 | INFO     | cat /etc/os-release:
[2025-06-03 23:06:02] NAME="CentOS Linux"
[2025-06-03 23:06:02] VERSION="7 (Core)"
[2025-06-03 23:06:02] ID="centos"
[2025-06-03 23:06:02] ID_LIKE="rhel fedora"
[2025-06-03 23:06:02] VERSION_ID="7"
[2025-06-03 23:06:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:06:02] ANSI_COLOR="0;31"
[2025-06-03 23:06:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:06:02] HOME_URL="https://www.centos.org/"
[2025-06-03 23:06:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:06:02] 
[2025-06-03 23:06:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:06:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:06:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:06:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:06:02] 
[2025-06-03 23:06:02] 2025-06-03 19:13:26,421 | INFO     | **************************************
[2025-06-03 23:06:02] 2025-06-03 19:13:26,924 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 23:06:02] 2025-06-03 19:13:27,131 | INFO     | sufficient remaining disk space (497118347264 B)
[2025-06-03 23:06:02] 2025-06-03 19:13:27,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:06:02] 2025-06-03 19:13:27,132 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:06:02] 2025-06-03 19:13:27,132 | INFO     | update_server=False
[2025-06-03 23:06:02] 2025-06-03 19:13:27,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:06:02] 2025-06-03 19:13:27,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:06:02] 2025-06-03 19:13:27,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:06:02] 2025-06-03 19:13:27,571 | INFO     | all job control threads have been joined
[2025-06-03 23:06:02] 2025-06-03 19:13:27,780 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:06:02] 2025-06-03 19:13:27,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:06:02] 2025-06-03 19:13:27,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:06:02] 2025-06-03 19:13:27,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:06:02] 2025-06-03 19:13:27,784 | INFO     | aborting loop
[2025-06-03 23:06:02] 2025-06-03 19:13:28,139 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:28,169 | INFO     | all data control threads have been joined
[2025-06-03 23:06:02] 2025-06-03 19:13:28,275 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:28,286 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:28,367 | INFO     | all payload control threads have been joined
[2025-06-03 23:06:02] 2025-06-03 19:13:28,387 | INFO     | [job] validate thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:28,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:28,577 | INFO     | [job] control thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:28,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:06:02] 2025-06-03 19:13:28,749 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:28,790 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:29,062 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:29,141 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:29,176 | INFO     | [data] control thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:29,257 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:29,374 | INFO     | [payload] control thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:29,443 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:29,735 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:31,151 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:06:02] 2025-06-03 19:13:32,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571836360512)>', '<ExcThread(monitor, started 140571117086464)>']
[2025-06-03 23:06:02] 2025-06-03 19:13:32,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:06:02] 2025-06-03 19:13:32,810 | INFO     | [monitor] control thread has ended
[2025-06-03 23:06:02] 2025-06-03 19:13:37,193 | INFO     | all workflow threads have been joined
[2025-06-03 23:06:02] 2025-06-03 19:13:37,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:06:02] 2025-06-03 19:13:37,193 | INFO     | traces error code: 0
[2025-06-03 23:06:02] 2025-06-03 19:13:37,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:06:02] 2025-06-03 19:13:37,589 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:06:02] 2025-06-03 19:13:37,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:06:02] 2025-06-03 19:13:37,825 [wrapper] pilotpid: 18825
[2025-06-03 23:06:02] 2025-06-03 19:13:37,936 [wrapper] Pilot exit status: 0
[2025-06-03 23:06:02] 2025-06-03 19:13:38,384 [wrapper] pandaids: 6677495073
[2025-06-03 23:06:02] 2025-06-03 19:13:39,011 [wrapper] cleanup supervisor_pilot 24398 18826
[2025-06-03 23:06:02] 2025-06-03 19:13:39,041 [wrapper] Test setup, not cleaning
[2025-06-03 23:06:02] 2025-06-03 19:13:39,069 [wrapper] apfmon messages muted
[2025-06-03 23:06:02] 2025-06-03 19:13:39,105 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:06:02] 2025-06-03 19:13:39,132 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:06:02]  *** Error codes and diagnostics ***
[2025-06-03 23:06:02]     "exeErrorCode": 0,
[2025-06-03 23:06:02]     "exeErrorDiag": "",
[2025-06-03 23:06:02]     "pilotErrorCode": 0,
[2025-06-03 23:06:02]     "pilotErrorDiag": "",
[2025-06-03 23:06:02]  *** Listing of results directory ***
[2025-06-03 23:06:02] total 397276
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:25 pilot3.tar.gz
[2025-06-03 23:06:02] -rwx------. 1 boinc boinc     37140 Jun  3 08:32 runpilot2-wrapper.sh
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:32 queuedata.json
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:06:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:06 run_atlas
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:06 job.xml
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc      6390 Jun  3 17:06 init_data.xml
[2025-06-03 23:06:02] -rw-r--r--. 2 boinc boinc 212917261 Jun  3 17:06 EVNT.45006593._000896.pool.root.1
[2025-06-03 23:06:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:06 start_atlas.sh
[2025-06-03 23:06:02] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:06 shared
[2025-06-03 23:06:02] -rw-r--r--. 2 boinc boinc    508883 Jun  3 17:06 input.tar.gz
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:06 boinc_lockfile
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc      2521 Jun  3 17:16 pandaJob.out
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc    982724 Jun  3 17:16 agis_schedconf.cvmfs.json
[2025-06-03 23:06:02] drwx------. 4 boinc boinc      4096 Jun  3 17:16 pilot3
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc 186878500 Jun  3 21:09 HITS.45006595._022383.pool.root.1
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:10 boinc_task_state.xml
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc      1018 Jun  3 21:11 memory_monitor_summary.json
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc   1603667 Jun  3 21:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc    370816 Jun  3 21:11 log.45006595._022383.job.log.tgz.1
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc        95 Jun  3 21:12 pilot_heartbeat.json
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc      7689 Jun  3 21:13 heartbeat.json
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc      4416 Jun  3 21:13 pilotlog.txt
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc   1230106 Jun  3 21:13 log.45006595._022383.job.log.1
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc       357 Jun  3 21:13 output.list
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:13 runtime_log
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc   1617920 Jun  3 21:13 result.tar.gz
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc      8659 Jun  3 21:13 runtime_log.err
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc       656 Jun  3 21:13 3WkMDmKNag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUcXKDm5UfsPm.diag
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc        28 Jun  3 23:06 wrapper_checkpoint.txt
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:06 boinc_mmap_file
[2025-06-03 23:06:02] -rw-r--r--. 1 boinc boinc     20575 Jun  3 23:06 stderr.txt
[2025-06-03 23:06:02] HITS file was successfully produced:
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc 186878500 Jun  3 21:09 shared/HITS.pool.root.1
[2025-06-03 23:06:02]  *** Contents of shared directory: ***
[2025-06-03 23:06:02] total 392524
[2025-06-03 23:06:02] -rw-r--r--. 2 boinc boinc 212917261 Jun  3 17:06 ATLAS.root_0
[2025-06-03 23:06:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:06 start_atlas.sh
[2025-06-03 23:06:02] -rw-r--r--. 2 boinc boinc    508883 Jun  3 17:06 input.tar.gz
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc 186878500 Jun  3 21:09 HITS.pool.root.1
[2025-06-03 23:06:02] -rw-------. 1 boinc boinc   1617920 Jun  3 21:13 result.tar.gz
23:06:04 (8653): run_atlas exited; CPU time 53108.883290
23:06:04 (8653): called boinc_finish(0)

</stderr_txt>
]]>

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