Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:36:28 (2246255): wrapper (7.7.26015): starting
17:36:28 (2246255): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 17:36:28] Arguments: --nthreads 4
[2025-06-04 17:36:28] Threads: 4
[2025-06-04 17:36:28] Checking for CVMFS
[2025-06-04 17:36:28] No cvmfs_config command found, will try listing directly
[2025-06-04 17:36:28] CVMFS is ok
[2025-06-04 17:36:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:36:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:36:28] Further information can be found at the LHC@home message board.
[2025-06-04 17:36:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:36:28] Checking for apptainer binary...
[2025-06-04 17:36:28] which: no apptainer in ((null))
[2025-06-04 17:36:28] apptainer is not installed, using version from CVMFS
[2025-06-04 17:36:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:36:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-04 17:36:28] apptainer works
[2025-06-04 17:36:28] Set ATHENA_PROC_NUMBER=4
[2025-06-04 17:36:28] Set ATHENA_CORE_NUMBER=4
[2025-06-04 17:36:28] Starting ATLAS job with PandaID=6677495367
[2025-06-04 17:36:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:45:43]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:45:43] 2025-06-04 17:45:23,045 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:45:43] 2025-06-04 17:45:23,355 | INFO     | monitor loop #542: job 0:6677495367 is in state 'finished'
[2025-06-04 19:45:43] 2025-06-04 17:45:23,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:45:43] 2025-06-04 17:45:25,864 | INFO     | monitor loop #543: job 0:6677495367 is in state 'finished'
[2025-06-04 19:45:43] 2025-06-04 17:45:25,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:45:43] 2025-06-04 17:45:28,368 | INFO     | monitor loop #544: job 0:6677495367 is in state 'finished'
[2025-06-04 19:45:43] 2025-06-04 17:45:28,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:45:43] 2025-06-04 17:45:28,998 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 19:45:43] 2025-06-04 17:45:28,998 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6677495367/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:45:43] 2025-06-04 17:45:28,999 | INFO     | extracted standard info from prmon json
[2025-06-04 19:45:43] 2025-06-04 17:45:28,999 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:45:43] 2025-06-04 17:45:28,999 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:45:43] 2025-06-04 17:45:29,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:45:43] 2025-06-04 17:45:29,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:45:43] 2025-06-04 17:45:29,002 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:45:43] 2025-06-04 17:45:29,003 | INFO     | sum of square deviations: 620244187.5
[2025-06-04 19:45:43] 2025-06-04 17:45:29,003 | INFO     | sum of deviations: 15727375355.5
[2025-06-04 19:45:43] 2025-06-04 17:45:29,003 | INFO     | mean x: 1749055248.5
[2025-06-04 19:45:43] 2025-06-04 17:45:29,003 | INFO     | mean y: 2303017.5
[2025-06-04 19:45:43] 2025-06-04 17:45:29,003 | INFO     | -- intersect: -44348049577.56858
[2025-06-04 19:45:43] 2025-06-04 17:45:29,003 | INFO     | intersect: -44348049577.56858
[2025-06-04 19:45:43] 2025-06-04 17:45:29,003 | INFO     | chi2: 1.5183077368244917
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | sum of square deviations: 549294020.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | sum of deviations: 15118092807.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | mean x: 1749055096.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | mean y: 2301707.5454545454
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | -- intersect: -48136538882.5711
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | intersect: -48136538882.5711
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | chi2: 1.5204979558390022
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | current chi2=1.5204979558390022 (change=-0.1442539586270724 %)
[2025-06-04 19:45:43] 2025-06-04 17:45:29,004 | INFO     | right removable region: 120
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | sum of square deviations: 549294020.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | sum of deviations: -2282976911.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | mean x: 1749055401.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | mean y: 2341027.371900826
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | -- intersect: 7271768603.777786
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | intersect: 7271768603.777786
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | chi2: 0.004259219414315074
[2025-06-04 19:45:43] 2025-06-04 17:45:29,005 | INFO     | current chi2=0.004259219414315074 (change=99.71947588021759 %)
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | sum of deviations: -2388455091.5
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | mean x: 1749055553.5
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | mean y: 2341263.543103448
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | -- intersect: 8634125348.912252
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | intersect: 8634125348.912252
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | chi2: 0.003710236480780615
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | current chi2=0.003710236480780615 (change=12.889285104433657 %)
[2025-06-04 19:45:43] 2025-06-04 17:45:29,006 | INFO     | left removable region: 20
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | sum of deviations: -1574533830.0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | mean x: 1749055675.5
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | mean y: 2339556.3
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | -- intersect: 8884541396.354746
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | intersect: 8884541396.354746
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | chi2: 0.0032290918883347425
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | -- intersect: 8884541396.354746
[2025-06-04 19:45:43] 2025-06-04 17:45:29,007 | INFO     | current memory leak: -5.08 B/s (using 100 data points, chi2=0.00)
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | ..............................
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . Timing measurements:
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . get job = 0 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . initial setup = 1 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . payload setup = 9 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . stage-in = 0 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . payload execution = 7685 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . stage-out = 0 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | . log creation = 0 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,008 | INFO     | ..............................
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | 
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | job summary report
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | --------------------------------------------------
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | PanDA job id: 6677495367
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | task id: 45006595
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | errors: (none)
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | pilot state: finished 
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | transexitcode: 0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,074 | INFO     | exeerrorcode: 0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | exeerrordiag: 
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | exitcode: 0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | exitmsg: OK
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | cpuconsumptiontime: 29416 s
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | nevents: 400
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | neventsw: 0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | pid: 2258885
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | pgrp: 2258885
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | corecount: 4
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | event service: False
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | sizes: {0: 2397352, 7: 2397558, 11: 2397586, 7698: 2425189, 7699: 2425188, 7700: 2434209, 7703: 2434393, 7710: 2434563}
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | --------------------------------------------------
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | 
[2025-06-04 19:45:43] 2025-06-04 17:45:29,075 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-06-04 19:45:43] 2025-06-04 17:45:29,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | job 6677495367 has completed (purged errors)
[2025-06-04 19:45:43] 2025-06-04 17:45:29,102 | INFO     | overall cleanup function is called
[2025-06-04 19:45:43] 2025-06-04 17:45:30,111 | INFO     | --- collectZombieJob: --- 10, [2258885]
[2025-06-04 19:45:43] 2025-06-04 17:45:30,112 | INFO     | zombie collector waiting for pid 2258885
[2025-06-04 19:45:43] 2025-06-04 17:45:30,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:45:43] 2025-06-04 17:45:30,112 | INFO     | collected zombie processes
[2025-06-04 19:45:43] 2025-06-04 17:45:30,112 | INFO     | will attempt to kill all subprocesses of pid=2258885
[2025-06-04 19:45:43] 2025-06-04 17:45:30,770 | INFO     | process IDs to be killed: [2258885] (in reverse order)
[2025-06-04 19:45:43] 2025-06-04 17:45:30,991 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:45:43] 2025-06-04 17:45:30,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:45:43] 2025-06-04 17:45:31,017 | INFO     | did not find any defunct processes belonging to 2258885
[2025-06-04 19:45:43] 2025-06-04 17:45:31,041 | INFO     | did not find any defunct processes belonging to 2258885
[2025-06-04 19:45:43] 2025-06-04 17:45:31,041 | INFO     | ready for new job
[2025-06-04 19:45:43] 2025-06-04 17:45:31,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:45:43] 2025-06-04 17:45:31,043 | INFO     | **************************************
[2025-06-04 19:45:43] 2025-06-04 17:45:31,043 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:45:43] 2025-06-04 17:45:31,043 | INFO     | **************************************
[2025-06-04 19:45:43] 2025-06-04 17:45:31,043 | INFO     | 
[2025-06-04 19:45:43] 2025-06-04 17:45:31,051 | INFO     | architecture information:
[2025-06-04 19:45:43] 2025-06-04 17:45:31,051 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:45:43] 2025-06-04 17:45:31,073 | INFO     | cat /etc/os-release:
[2025-06-04 19:45:43] NAME="CentOS Linux"
[2025-06-04 19:45:43] VERSION="7 (Core)"
[2025-06-04 19:45:43] ID="centos"
[2025-06-04 19:45:43] ID_LIKE="rhel fedora"
[2025-06-04 19:45:43] VERSION_ID="7"
[2025-06-04 19:45:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:45:43] ANSI_COLOR="0;31"
[2025-06-04 19:45:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:45:43] HOME_URL="https://www.centos.org/"
[2025-06-04 19:45:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:45:43] 
[2025-06-04 19:45:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:45:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:45:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:45:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:45:43] 
[2025-06-04 19:45:43] 2025-06-04 17:45:31,074 | INFO     | **************************************
[2025-06-04 19:45:43] 2025-06-04 17:45:31,577 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-06-04 19:45:43] 2025-06-04 17:45:31,595 | INFO     | sufficient remaining disk space (3216680943616 B)
[2025-06-04 19:45:43] 2025-06-04 17:45:31,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:45:43] 2025-06-04 17:45:31,596 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:45:43] 2025-06-04 17:45:31,596 | INFO     | update_server=False
[2025-06-04 19:45:43] 2025-06-04 17:45:31,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:45:43] 2025-06-04 17:45:31,596 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:45:43] 2025-06-04 17:45:31,596 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:45:43] 2025-06-04 17:45:31,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:45:43] 2025-06-04 17:45:31,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:45:43] 2025-06-04 17:45:31,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:45:43] 2025-06-04 17:45:31,701 | INFO     | all payload control threads have been joined
[2025-06-04 19:45:43] 2025-06-04 17:45:31,752 | INFO     | all job control threads have been joined
[2025-06-04 19:45:43] 2025-06-04 17:45:31,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:45:43] 2025-06-04 17:45:31,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:45:43] 2025-06-04 17:45:31,877 | INFO     | aborting loop
[2025-06-04 19:45:43] 2025-06-04 17:45:32,193 | INFO     | all data control threads have been joined
[2025-06-04 19:45:43] 2025-06-04 17:45:32,600 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:32,707 | INFO     | [payload] control thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:32,757 | INFO     | [job] control thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:32,832 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:32,881 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,197 | INFO     | [data] control thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,213 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,255 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,277 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,323 | INFO     | [job] validate thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,630 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,769 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:33,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:34,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:34,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:45:43] 2025-06-04 17:45:35,088 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:35,820 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:45:43] 2025-06-04 17:45:37,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23268058085184)>', '<ExcThread(monitor, started 23267819616000)>']
[2025-06-04 19:45:43] 2025-06-04 17:45:38,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:45:43] 2025-06-04 17:45:38,631 | INFO     | [monitor] control thread has ended
[2025-06-04 19:45:43] 2025-06-04 17:45:42,714 | INFO     | all workflow threads have been joined
[2025-06-04 19:45:43] 2025-06-04 17:45:42,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:45:43] 2025-06-04 17:45:42,719 | INFO     | traces error code: 0
[2025-06-04 19:45:43] 2025-06-04 17:45:42,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:45:43] 2025-06-04 17:45:42,844 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:45:43] 2025-06-04 17:45:42,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:45:43] 2025-06-04 17:45:42,852 [wrapper] pilotpid: 2251450
[2025-06-04 19:45:43] 2025-06-04 17:45:42,855 [wrapper] Pilot exit status: 0
[2025-06-04 19:45:43] 2025-06-04 17:45:42,868 [wrapper] pandaids: 6677495367
[2025-06-04 19:45:43] 2025-06-04 17:45:43,010 [wrapper] cleanup supervisor_pilot 2670022 2251451
[2025-06-04 19:45:43] 2025-06-04 17:45:43,014 [wrapper] Test setup, not cleaning
[2025-06-04 19:45:43] 2025-06-04 17:45:43,018 [wrapper] apfmon messages muted
[2025-06-04 19:45:43] 2025-06-04 17:45:43,021 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:45:43] 2025-06-04 17:45:43,025 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:45:43]  *** Error codes and diagnostics ***
[2025-06-04 19:45:43]     "exeErrorCode": 0,
[2025-06-04 19:45:43]     "exeErrorDiag": "",
[2025-06-04 19:45:43]     "pilotErrorCode": 0,
[2025-06-04 19:45:43]     "pilotErrorDiag": "",
[2025-06-04 19:45:43]  *** Listing of results directory ***
[2025-06-04 19:45:43] total 396992
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc    495897 Jun  3 08:33 pilot3.tar.gz
[2025-06-04 19:45:43] -rwx------ 1 boinc boinc     37140 Jun  3 08:39 runpilot2-wrapper.sh
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc      5111 Jun  3 08:39 queuedata.json
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:45:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:36 run_atlas
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:36 job.xml
[2025-06-04 19:45:43] -rw-r--r-- 2 boinc boinc 218240037 Jun  4 17:36 EVNT.45006593._000905.pool.root.1
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc      6686 Jun  4 17:36 init_data.xml
[2025-06-04 19:45:43] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:36 start_atlas.sh
[2025-06-04 19:45:43] drwxrwx--x 2 boinc boinc      4096 Jun  4 17:36 shared
[2025-06-04 19:45:43] -rw-r--r-- 2 boinc boinc    508877 Jun  4 17:36 input.tar.gz
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:36 boinc_lockfile
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc      2524 Jun  4 17:36 pandaJob.out
[2025-06-04 19:45:43] -rw------- 1 boinc boinc    990989 Jun  4 17:36 agis_schedconf.cvmfs.json
[2025-06-04 19:45:43] -rw------- 1 boinc boinc   1598969 Jun  4 17:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:45:43] drwx------ 4 boinc boinc      4096 Jun  4 17:36 pilot3
[2025-06-04 19:45:43] -rw------- 1 boinc boinc        95 Jun  4 19:44 pilot_heartbeat.json
[2025-06-04 19:45:43] -rw------- 1 boinc boinc 182406823 Jun  4 19:44 HITS.45006595._022630.pool.root.1
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc       529 Jun  4 19:45 boinc_task_state.xml
[2025-06-04 19:45:43] -rw------- 1 boinc boinc      1030 Jun  4 19:45 memory_monitor_summary.json
[2025-06-04 19:45:43] -rw------- 1 boinc boinc    285765 Jun  4 19:45 log.45006595._022630.job.log.tgz.1
[2025-06-04 19:45:43] -rw------- 1 boinc boinc      7701 Jun  4 19:45 heartbeat.json
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:45 boinc_mmap_file
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc        26 Jun  4 19:45 wrapper_checkpoint.txt
[2025-06-04 19:45:43] -rw------- 1 boinc boinc      4488 Jun  4 19:45 pilotlog.txt
[2025-06-04 19:45:43] -rw------- 1 boinc boinc    733485 Jun  4 19:45 log.45006595._022630.job.log.1
[2025-06-04 19:45:43] -rw------- 1 boinc boinc       357 Jun  4 19:45 output.list
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:45 runtime_log
[2025-06-04 19:45:43] -rw------- 1 boinc boinc   1034240 Jun  4 19:45 result.tar.gz
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc      9040 Jun  4 19:45 runtime_log.err
[2025-06-04 19:45:43] -rw------- 1 boinc boinc       663 Jun  4 19:45 rp0NDmVUag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnfXKDmM5vIsm.diag
[2025-06-04 19:45:43] -rw-r--r-- 1 boinc boinc     20972 Jun  4 19:45 stderr.txt
[2025-06-04 19:45:43] HITS file was successfully produced:
[2025-06-04 19:45:43] -rw------- 1 boinc boinc 182406823 Jun  4 19:44 shared/HITS.pool.root.1
[2025-06-04 19:45:43]  *** Contents of shared directory: ***
[2025-06-04 19:45:43] total 392796
[2025-06-04 19:45:43] -rw-r--r-- 2 boinc boinc 218240037 Jun  4 17:36 ATLAS.root_0
[2025-06-04 19:45:43] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:36 start_atlas.sh
[2025-06-04 19:45:43] -rw-r--r-- 2 boinc boinc    508877 Jun  4 17:36 input.tar.gz
[2025-06-04 19:45:43] -rw------- 1 boinc boinc 182406823 Jun  4 19:44 HITS.pool.root.1
[2025-06-04 19:45:43] -rw------- 1 boinc boinc   1034240 Jun  4 19:45 result.tar.gz
19:45:45 (2246255): run_atlas exited; CPU time 29739.910386
19:45:45 (2246255): called boinc_finish(0)

</stderr_txt>
]]>

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