Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:15:49 (3472094): wrapper (7.7.26015): starting
05:15:49 (3472094): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:15:49] Arguments: --nthreads 8
[2025-06-03 05:15:49] Threads: 8
[2025-06-03 05:15:49] Checking for CVMFS
[2025-06-03 05:15:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:15:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:15:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:15:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:15:49] 2.12.6.0 1145515 200190 273800 146735 2 187 24984388 32935936 2840 130560 1 344342161 99.600 369877534 27466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 05:15:49] CVMFS is ok
[2025-06-03 05:15:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 05:15:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 05:15:49] Further information can be found at the LHC@home message board.
[2025-06-03 05:15:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:15:49] Checking for apptainer binary...
[2025-06-03 05:15:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:15:49] Running /usr/bin/apptainer --version
[2025-06-03 05:15:49] apptainer version 1.4.1-1.el9
[2025-06-03 05:15:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:15:49] c-8-17.aglt2.org
[2025-06-03 05:15:49] apptainer works
[2025-06-03 05:15:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:15:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:15:49] Starting ATLAS job with PandaID=6677495221
[2025-06-03 05:15:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:52:18]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:52:18]  filetype=log
[2025-06-03 06:52:18]  guid=13c801d0-7fe4-4e89-acd3-50deff5bfad7
[2025-06-03 06:52:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 06:52:18]  is_altstaged=None
[2025-06-03 06:52:18]  is_tar=False
[2025-06-03 06:52:18]  lfn=log.45006595._022531.job.log.tgz.1
[2025-06-03 06:52:18]  mtime=0
[2025-06-03 06:52:18]  protocol_id=None
[2025-06-03 06:52:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 06:52:18]  replicas=None
[2025-06-03 06:52:18]  scope=mc23_13p6TeV
[2025-06-03 06:52:18]  status=None
[2025-06-03 06:52:18]  status_code=0
[2025-06-03 06:52:18]  storage_token=
[2025-06-03 06:52:18]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677495221/log.45006595._022531.job.log.tgz.1
[2025-06-03 06:52:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/bb/log.45006595._022531.job.log.tgz.1
[2025-06-03 06:52:18]  workdir=None
[2025-06-03 06:52:18] ]
[2025-06-03 06:52:18] 2025-06-03 10:51:53,072 | INFO     | transferring file log.45006595._022531.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677495221/log.45006595._022531.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 06:52:18] 2025-06-03 10:51:53,073 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677495221/log.45006595._022531.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._022531.job
[2025-06-03 06:52:18] 2025-06-03 10:51:53,089 | INFO     | adding to output.list: log.45006595._022531.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/bb/log.45006595._022531.job.log.tg
[2025-06-03 06:52:18] 2025-06-03 10:51:53,090 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 06:52:18] 2025-06-03 10:51:53,090 | INFO     | summary of transferred files:
[2025-06-03 06:52:18] 2025-06-03 10:51:53,091 | INFO     |  -- lfn=log.45006595._022531.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 06:52:18] 2025-06-03 10:51:53,091 | INFO     | stage-out finished correctly
[2025-06-03 06:52:18] 2025-06-03 10:51:53,197 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 06:52:18] 2025-06-03 10:51:54,327 | INFO     | monitor loop #421: job 0:6677495221 is in state 'finished'
[2025-06-03 06:52:18] 2025-06-03 10:51:54,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:52:18] 2025-06-03 10:51:55,006 | INFO     | job 6677495221 has state=finished
[2025-06-03 06:52:18] 2025-06-03 10:51:55,007 | INFO     | preparing for final server update for job 6677495221 in state='finished'
[2025-06-03 06:52:18] 2025-06-03 10:51:55,007 | INFO     | this job has now completed (state=finished)
[2025-06-03 06:52:18] 2025-06-03 10:51:55,007 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 06:52:18] 2025-06-03 10:51:55,008 | INFO     | log transfer has been attempted: DONE
[2025-06-03 06:52:18] 2025-06-03 10:51:55,008 | INFO     | job 6677495221 has finished - writing final server update
[2025-06-03 06:52:18] 2025-06-03 10:51:55,008 | INFO     | total number of processed events: 400 (read)
[2025-06-03 06:52:18] 2025-06-03 10:51:55,024 | INFO     | executing command: lscpu
[2025-06-03 06:52:18] 2025-06-03 10:51:55,066 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 06:52:18] 2025-06-03 10:51:56,832 | INFO     | monitor loop #422: job 0:6677495221 is in state 'finished'
[2025-06-03 06:52:18] 2025-06-03 10:51:56,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:52:18] 2025-06-03 10:51:58,550 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 06:52:18] 2025-06-03 10:51:58,550 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677495221/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:52:18] 2025-06-03 10:51:58,551 | INFO     | extracted standard info from prmon json
[2025-06-03 06:52:18] 2025-06-03 10:51:58,551 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:52:18] 2025-06-03 10:51:58,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:52:18] 2025-06-03 10:51:58,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:52:18] 2025-06-03 10:51:58,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:52:18] 2025-06-03 10:51:58,553 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:52:18] 2025-06-03 10:51:58,553 | INFO     | sum of square deviations: 204163828.0
[2025-06-03 06:52:18] 2025-06-03 10:51:58,553 | INFO     | sum of deviations: 12250539232.000004
[2025-06-03 06:52:18] 2025-06-03 10:51:58,553 | INFO     | mean x: 1748945111.0
[2025-06-03 06:52:18] 2025-06-03 10:51:58,553 | INFO     | mean y: 2129057.5977011495
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | -- intersect: -104940655895.08305
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | intersect: -104940655895.08305
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | chi2: 0.9913029531723109
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | -- intersect: -104940655895.08305
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | current memory leak: 60.00 B/s (using 87 data points, chi2=0.99)
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | ..............................
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | . Timing measurements:
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | . get job = 0 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,554 | INFO     | . initial setup = 2 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,555 | INFO     | . payload setup = 5 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,555 | INFO     | . stage-in = 0 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,555 | INFO     | . payload execution = 5728 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,555 | INFO     | . stage-out = 0 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,555 | INFO     | . log creation = 0 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,555 | INFO     | ..............................
[2025-06-03 06:52:18] 2025-06-03 10:51:58,928 | INFO     | 
[2025-06-03 06:52:18] 2025-06-03 10:51:58,928 | INFO     | job summary report
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | --------------------------------------------------
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | PanDA job id: 6677495221
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | task id: 45006595
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | errors: (none)
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | pilot state: finished 
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | transexitcode: 0
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | exeerrorcode: 0
[2025-06-03 06:52:18] 2025-06-03 10:51:58,929 | INFO     | exeerrordiag: 
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | exitcode: 0
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | exitmsg: OK
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | cpuconsumptiontime: 39811 s
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | nevents: 400
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | neventsw: 0
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | pid: 3489914
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | pgrp: 3489914
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | corecount: 8
[2025-06-03 06:52:18] 2025-06-03 10:51:58,930 | INFO     | event service: False
[2025-06-03 06:52:18] 2025-06-03 10:51:58,931 | INFO     | sizes: {0: 2405131, 4: 2405337, 11: 2405365, 5737: 2431909, 5739: 2440906, 5744: 2441020}
[2025-06-03 06:52:18] 2025-06-03 10:51:58,931 | INFO     | --------------------------------------------------
[2025-06-03 06:52:18] 2025-06-03 10:51:58,931 | INFO     | 
[2025-06-03 06:52:18] 2025-06-03 10:51:58,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 06:52:18] 2025-06-03 10:51:58,949 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,949 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:52:18] 2025-06-03 10:51:58,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:52:18] 2025-06-03 10:51:58,952 | INFO     | job 6677495221 has completed (purged errors)
[2025-06-03 06:52:18] 2025-06-03 10:51:58,952 | INFO     | overall cleanup function is called
[2025-06-03 06:52:18] 2025-06-03 10:51:59,960 | INFO     | --- collectZombieJob: --- 10, [3489914]
[2025-06-03 06:52:18] 2025-06-03 10:51:59,961 | INFO     | zombie collector waiting for pid 3489914
[2025-06-03 06:52:18] 2025-06-03 10:51:59,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:52:18] 2025-06-03 10:51:59,961 | INFO     | collected zombie processes
[2025-06-03 06:52:18] 2025-06-03 10:51:59,961 | INFO     | will attempt to kill all subprocesses of pid=3489914
[2025-06-03 06:52:18] 2025-06-03 10:52:00,217 | INFO     | process IDs to be killed: [3489914] (in reverse order)
[2025-06-03 06:52:18] 2025-06-03 10:52:00,285 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:52:18] 2025-06-03 10:52:00,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:52:18] 2025-06-03 10:52:00,293 | INFO     | did not find any defunct processes belonging to 3489914
[2025-06-03 06:52:18] 2025-06-03 10:52:00,299 | INFO     | did not find any defunct processes belonging to 3489914
[2025-06-03 06:52:18] 2025-06-03 10:52:00,300 | INFO     | ready for new job
[2025-06-03 06:52:18] 2025-06-03 10:52:00,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:52:18] 2025-06-03 10:52:00,301 | INFO     | **************************************
[2025-06-03 06:52:18] 2025-06-03 10:52:00,302 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:52:18] 2025-06-03 10:52:00,302 | INFO     | **************************************
[2025-06-03 06:52:18] 2025-06-03 10:52:00,302 | INFO     | 
[2025-06-03 06:52:18] 2025-06-03 10:52:00,316 | INFO     | architecture information:
[2025-06-03 06:52:18] 2025-06-03 10:52:00,317 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:52:18] 2025-06-03 10:52:00,330 | INFO     | cat /etc/os-release:
[2025-06-03 06:52:18] NAME="CentOS Linux"
[2025-06-03 06:52:18] VERSION="7 (Core)"
[2025-06-03 06:52:18] ID="centos"
[2025-06-03 06:52:18] ID_LIKE="rhel fedora"
[2025-06-03 06:52:18] VERSION_ID="7"
[2025-06-03 06:52:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:52:18] ANSI_COLOR="0;31"
[2025-06-03 06:52:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:52:18] HOME_URL="https://www.centos.org/"
[2025-06-03 06:52:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:52:18] 
[2025-06-03 06:52:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:52:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:52:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:52:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:52:18] 
[2025-06-03 06:52:18] 2025-06-03 10:52:00,330 | INFO     | **************************************
[2025-06-03 06:52:18] 2025-06-03 10:52:00,833 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 06:52:18] 2025-06-03 10:52:00,848 | INFO     | sufficient remaining disk space (74188849152 B)
[2025-06-03 06:52:18] 2025-06-03 10:52:00,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:52:18] 2025-06-03 10:52:00,848 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:52:18] 2025-06-03 10:52:00,848 | INFO     | update_server=False
[2025-06-03 06:52:18] 2025-06-03 10:52:00,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:52:18] 2025-06-03 10:52:00,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:52:18] 2025-06-03 10:52:00,849 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 06:52:18] 2025-06-03 10:52:00,849 | INFO     | aborting loop
[2025-06-03 06:52:18] 2025-06-03 10:52:00,849 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:52:18] 2025-06-03 10:52:00,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:52:18] 2025-06-03 10:52:00,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:52:18] 2025-06-03 10:52:01,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:52:18] 2025-06-03 10:52:01,499 | INFO     | all data control threads have been joined
[2025-06-03 06:52:18] 2025-06-03 10:52:01,849 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:01,855 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:01,938 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:01,958 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:01,968 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:02,131 | INFO     | all payload control threads have been joined
[2025-06-03 06:52:18] 2025-06-03 10:52:02,197 | INFO     | [job] validate thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:02,436 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:02,495 | INFO     | all job control threads have been joined
[2025-06-03 06:52:18] 2025-06-03 10:52:02,505 | INFO     | [data] control thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:02,560 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:03,137 | INFO     | [payload] control thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:03,213 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:03,274 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:03,501 | INFO     | [job] control thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:03,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:52:18] 2025-06-03 10:52:03,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:52:18] 2025-06-03 10:52:04,625 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:07,815 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:11,244 | INFO     | job.realtimelogging is not enabled
[2025-06-03 06:52:18] 2025-06-03 10:52:12,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:52:18] 2025-06-03 10:52:13,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009536403264)>', '<ExcThread(monitor, started 140008686089984)>']
[2025-06-03 06:52:18] 2025-06-03 10:52:13,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:52:18] 2025-06-03 10:52:13,915 | INFO     | [monitor] control thread has ended
[2025-06-03 06:52:18] 2025-06-03 10:52:18,337 | INFO     | all workflow threads have been joined
[2025-06-03 06:52:18] 2025-06-03 10:52:18,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:52:18] 2025-06-03 10:52:18,338 | INFO     | traces error code: 0
[2025-06-03 06:52:18] 2025-06-03 10:52:18,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:52:18] 2025-06-03 10:52:18,439 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:52:18] 2025-06-03 10:52:18,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:52:18] 2025-06-03 10:52:18,444 [wrapper] pilotpid: 3482117
[2025-06-03 06:52:18] 2025-06-03 10:52:18,446 [wrapper] Pilot exit status: 0
[2025-06-03 06:52:18] 2025-06-03 10:52:18,455 [wrapper] pandaids: 6677495221
[2025-06-03 06:52:18] 2025-06-03 10:52:18,500 [wrapper] cleanup supervisor_pilot 3659148 3482118
[2025-06-03 06:52:18] 2025-06-03 10:52:18,503 [wrapper] Test setup, not cleaning
[2025-06-03 06:52:18] 2025-06-03 10:52:18,505 [wrapper] apfmon messages muted
[2025-06-03 06:52:18] 2025-06-03 10:52:18,508 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:52:18] 2025-06-03 10:52:18,510 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:52:18]  *** Error codes and diagnostics ***
[2025-06-03 06:52:18]     "exeErrorCode": 0,
[2025-06-03 06:52:18]     "exeErrorDiag": "",
[2025-06-03 06:52:18]     "pilotErrorCode": 0,
[2025-06-03 06:52:18]     "pilotErrorDiag": "",
[2025-06-03 06:52:18]  *** Listing of results directory ***
[2025-06-03 06:52:18] total 384980
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 02:33 pilot3.tar.gz
[2025-06-03 06:52:18] -rwx------. 1 boincer umatlas     37140 Jun  3 02:34 runpilot2-wrapper.sh
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 02:34 queuedata.json
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas       100 Jun  3 05:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:52:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 05:15 run_atlas
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas       105 Jun  3 05:15 job.xml
[2025-06-03 06:52:18] -rw-r--r--. 2 boincer umatlas 213902565 Jun  3 05:15 EVNT.45006593._000901.pool.root.1
[2025-06-03 06:52:18] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 05:15 shared
[2025-06-03 06:52:18] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 05:15 input.tar.gz
[2025-06-03 06:52:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:15 start_atlas.sh
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas         0 Jun  3 05:15 boinc_lockfile
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas      2523 Jun  3 05:15 pandaJob.out
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas    985498 Jun  3 05:15 agis_schedconf.cvmfs.json
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas   1603667 Jun  3 05:15 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:52:18] drwx------. 4 boincer umatlas      4096 Jun  3 05:15 pilot3
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas      6675 Jun  3 06:45 init_data.xml
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas       530 Jun  3 06:51 boinc_task_state.xml
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas 174716923 Jun  3 06:51 HITS.45006595._022531.pool.root.1
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas      1032 Jun  3 06:51 memory_monitor_summary.json
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas        95 Jun  3 06:51 pilot_heartbeat.json
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas    330488 Jun  3 06:51 log.45006595._022531.job.log.tgz.1
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas      7708 Jun  3 06:51 heartbeat.json
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 06:52 boinc_mmap_file
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas        27 Jun  3 06:52 wrapper_checkpoint.txt
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas      4548 Jun  3 06:52 pilotlog.txt
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas    552320 Jun  3 06:52 log.45006595._022531.job.log.1
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas       357 Jun  3 06:52 output.list
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas       620 Jun  3 06:52 runtime_log
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas    901120 Jun  3 06:52 result.tar.gz
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas       649 Jun  3 06:52 WPyMDmSPag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvRiKDmbimsWo.diag
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 06:52 runtime_log.err
[2025-06-03 06:52:18] -rw-r--r--. 1 boincer umatlas     21197 Jun  3 06:52 stderr.txt
[2025-06-03 06:52:18] HITS file was successfully produced:
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas 174716923 Jun  3 06:51 shared/HITS.pool.root.1
[2025-06-03 06:52:18]  *** Contents of shared directory: ***
[2025-06-03 06:52:18] total 380920
[2025-06-03 06:52:18] -rw-r--r--. 2 boincer umatlas 213902565 Jun  3 05:15 ATLAS.root_0
[2025-06-03 06:52:18] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 05:15 input.tar.gz
[2025-06-03 06:52:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:15 start_atlas.sh
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas 174716923 Jun  3 06:51 HITS.pool.root.1
[2025-06-03 06:52:18] -rw-------. 1 boincer umatlas    901120 Jun  3 06:52 result.tar.gz
06:52:19 (3472094): run_atlas exited; CPU time 39942.027351
06:52:19 (3472094): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN