Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:35 (1340727): wrapper (7.7.26015): starting
05:20:35 (1340727): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:20:35] Arguments: --nthreads 8
[2025-06-03 05:20:35] Threads: 8
[2025-06-03 05:20:35] Checking for CVMFS
[2025-06-03 05:20:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:20:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:20:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:20:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:20:35] 2.12.6.0 213643 30591 369024 146737 1 117 37661215 40960000 9823 16776704 0 368302074 99.746 238049317 23096 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 05:20:35] CVMFS is ok
[2025-06-03 05:20:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 05:20:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 05:20:35] Further information can be found at the LHC@home message board.
[2025-06-03 05:20:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:20:35] Checking for apptainer binary...
[2025-06-03 05:20:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:20:35] Running /usr/bin/apptainer --version
[2025-06-03 05:20:35] apptainer version 1.4.1-1.el9
[2025-06-03 05:20:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:20:35] c7-2-17.aglt2.org
[2025-06-03 05:20:35] apptainer works
[2025-06-03 05:20:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:20:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:20:35] Starting ATLAS job with PandaID=6677495123
[2025-06-03 05:20:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:27:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:27:10]  guid=ac26a21f-a42f-4ae6-ba36-dabb20a6edbe
[2025-06-03 06:27:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 06:27:10]  is_altstaged=None
[2025-06-03 06:27:10]  is_tar=False
[2025-06-03 06:27:10]  lfn=log.45006595._022433.job.log.tgz.1
[2025-06-03 06:27:10]  mtime=0
[2025-06-03 06:27:10]  protocol_id=None
[2025-06-03 06:27:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 06:27:10]  replicas=None
[2025-06-03 06:27:10]  scope=mc23_13p6TeV
[2025-06-03 06:27:10]  status=None
[2025-06-03 06:27:10]  status_code=0
[2025-06-03 06:27:10]  storage_token=
[2025-06-03 06:27:10]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6677495123/log.45006595._022433.job.log.tgz.1
[2025-06-03 06:27:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/58/log.45006595._022433.job.log.tgz.1
[2025-06-03 06:27:10]  workdir=None
[2025-06-03 06:27:10] ]
[2025-06-03 06:27:10] 2025-06-03 10:26:48,760 | INFO     | transferring file log.45006595._022433.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6677495123/log.45006595._022433.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 06:27:10] 2025-06-03 10:26:48,762 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6677495123/log.45006595._022433.job.log.tgz.1 /tmp/boinchome/slots/7/log.45006595._022433.job
[2025-06-03 06:27:10] 2025-06-03 10:26:48,788 | INFO     | adding to output.list: log.45006595._022433.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/58/log.45006595._022433.job.log.tg
[2025-06-03 06:27:10] 2025-06-03 10:26:48,789 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 06:27:10] 2025-06-03 10:26:48,789 | INFO     | summary of transferred files:
[2025-06-03 06:27:10] 2025-06-03 10:26:48,789 | INFO     |  -- lfn=log.45006595._022433.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 06:27:10] 2025-06-03 10:26:48,790 | INFO     | stage-out finished correctly
[2025-06-03 06:27:10] 2025-06-03 10:26:48,910 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 06:27:10] 2025-06-03 10:26:48,992 | INFO     | job 6677495123 has state=finished
[2025-06-03 06:27:10] 2025-06-03 10:26:48,993 | INFO     | preparing for final server update for job 6677495123 in state='finished'
[2025-06-03 06:27:10] 2025-06-03 10:26:49,066 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 06:27:10] 2025-06-03 10:26:49,066 | INFO     | this job has now completed (state=finished)
[2025-06-03 06:27:10] 2025-06-03 10:26:49,066 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 06:27:10] 2025-06-03 10:26:49,067 | INFO     | log transfer has been attempted: DONE
[2025-06-03 06:27:10] 2025-06-03 10:26:49,067 | INFO     | job 6677495123 has finished - writing final server update
[2025-06-03 06:27:10] 2025-06-03 10:26:49,067 | INFO     | total number of processed events: 400 (read)
[2025-06-03 06:27:10] 2025-06-03 10:26:49,088 | INFO     | executing command: lscpu
[2025-06-03 06:27:10] 2025-06-03 10:26:49,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 06:27:10] 2025-06-03 10:26:51,008 | INFO     | monitor loop #286: job 0:6677495123 is in state 'finished'
[2025-06-03 06:27:10] 2025-06-03 10:26:51,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:27:10] 2025-06-03 10:26:53,512 | INFO     | monitor loop #287: job 0:6677495123 is in state 'finished'
[2025-06-03 06:27:10] 2025-06-03 10:26:53,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:27:10] 2025-06-03 10:26:54,109 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 06:27:10] 2025-06-03 10:26:54,110 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677495123/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:27:10] 2025-06-03 10:26:54,111 | INFO     | extracted standard info from prmon json
[2025-06-03 06:27:10] 2025-06-03 10:26:54,111 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:27:10] 2025-06-03 10:26:54,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:27:10] 2025-06-03 10:26:54,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:27:10] 2025-06-03 10:26:54,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:27:10] 2025-06-03 10:26:54,114 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:27:10] 2025-06-03 10:26:54,114 | INFO     | sum of square deviations: 60482994.5
[2025-06-03 06:27:10] 2025-06-03 10:26:54,114 | INFO     | sum of deviations: 5746648441.5
[2025-06-03 06:27:10] 2025-06-03 10:26:54,114 | INFO     | mean x: 1748944515.5
[2025-06-03 06:27:10] 2025-06-03 10:26:54,114 | INFO     | mean y: 2165514.0517241377
[2025-06-03 06:27:10] 2025-06-03 10:26:54,114 | INFO     | -- intersect: -166169654471.94528
[2025-06-03 06:27:10] 2025-06-03 10:26:54,115 | INFO     | intersect: -166169654471.94528
[2025-06-03 06:27:10] 2025-06-03 10:26:54,115 | INFO     | chi2: 0.7257535188965757
[2025-06-03 06:27:10] 2025-06-03 10:26:54,115 | INFO     | -- intersect: -166169654471.94528
[2025-06-03 06:27:10] 2025-06-03 10:26:54,115 | INFO     | current memory leak: 95.01 B/s (using 58 data points, chi2=0.73)
[2025-06-03 06:27:10] 2025-06-03 10:26:54,115 | INFO     | ..............................
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . Timing measurements:
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . get job = 0 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . initial setup = 2 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . payload setup = 6 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . stage-in = 0 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . payload execution = 3936 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . stage-out = 1 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | . log creation = 0 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,116 | INFO     | ..............................
[2025-06-03 06:27:10] 2025-06-03 10:26:54,460 | INFO     | 
[2025-06-03 06:27:10] 2025-06-03 10:26:54,460 | INFO     | job summary report
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | --------------------------------------------------
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | PanDA job id: 6677495123
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | task id: 45006595
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | errors: (none)
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | pilot state: finished 
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | transexitcode: 0
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | exeerrorcode: 0
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | exeerrordiag: 
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | exitcode: 0
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | exitmsg: OK
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | cpuconsumptiontime: 24896 s
[2025-06-03 06:27:10] 2025-06-03 10:26:54,461 | INFO     | nevents: 400
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | neventsw: 0
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | pid: 1363838
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | pgrp: 1363838
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | corecount: 8
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | event service: False
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | sizes: {0: 2405176, 4: 2405382, 11: 2405410, 3947: 2431124, 3948: 2440121, 3953: 2440235}
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | --------------------------------------------------
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | 
[2025-06-03 06:27:10] 2025-06-03 10:26:54,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-06-03 06:27:10] 2025-06-03 10:26:54,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,492 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,492 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,493 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:27:10] 2025-06-03 10:26:54,494 | INFO     | job 6677495123 has completed (purged errors)
[2025-06-03 06:27:10] 2025-06-03 10:26:54,494 | INFO     | overall cleanup function is called
[2025-06-03 06:27:10] 2025-06-03 10:26:55,393 | INFO     | 3972s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 06:27:10] 2025-06-03 10:26:55,503 | INFO     | --- collectZombieJob: --- 10, [1363838]
[2025-06-03 06:27:10] 2025-06-03 10:26:55,503 | INFO     | zombie collector waiting for pid 1363838
[2025-06-03 06:27:10] 2025-06-03 10:26:55,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:27:10] 2025-06-03 10:26:55,503 | INFO     | collected zombie processes
[2025-06-03 06:27:10] 2025-06-03 10:26:55,503 | INFO     | will attempt to kill all subprocesses of pid=1363838
[2025-06-03 06:27:10] 2025-06-03 10:26:56,026 | INFO     | process IDs to be killed: [1363838] (in reverse order)
[2025-06-03 06:27:10] 2025-06-03 10:26:56,196 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:27:10] 2025-06-03 10:26:56,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:27:10] 2025-06-03 10:26:56,216 | INFO     | did not find any defunct processes belonging to 1363838
[2025-06-03 06:27:10] 2025-06-03 10:26:56,239 | INFO     | did not find any defunct processes belonging to 1363838
[2025-06-03 06:27:10] 2025-06-03 10:26:56,240 | INFO     | ready for new job
[2025-06-03 06:27:10] 2025-06-03 10:26:56,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:27:10] 2025-06-03 10:26:56,243 | INFO     | **************************************
[2025-06-03 06:27:10] 2025-06-03 10:26:56,243 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:27:10] 2025-06-03 10:26:56,243 | INFO     | **************************************
[2025-06-03 06:27:10] 2025-06-03 10:26:56,243 | INFO     | 
[2025-06-03 06:27:10] 2025-06-03 10:26:56,260 | INFO     | architecture information:
[2025-06-03 06:27:10] 2025-06-03 10:26:56,260 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:27:10] 2025-06-03 10:26:56,281 | INFO     | cat /etc/os-release:
[2025-06-03 06:27:10] NAME="CentOS Linux"
[2025-06-03 06:27:10] VERSION="7 (Core)"
[2025-06-03 06:27:10] ID="centos"
[2025-06-03 06:27:10] ID_LIKE="rhel fedora"
[2025-06-03 06:27:10] VERSION_ID="7"
[2025-06-03 06:27:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:27:10] ANSI_COLOR="0;31"
[2025-06-03 06:27:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:27:10] HOME_URL="https://www.centos.org/"
[2025-06-03 06:27:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:27:10] 
[2025-06-03 06:27:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:27:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:27:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:27:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:27:10] 
[2025-06-03 06:27:10] 2025-06-03 10:26:56,282 | INFO     | **************************************
[2025-06-03 06:27:10] 2025-06-03 10:26:56,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-06-03 06:27:10] 2025-06-03 10:26:56,813 | INFO     | sufficient remaining disk space (124146155520 B)
[2025-06-03 06:27:10] 2025-06-03 10:26:56,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:27:10] 2025-06-03 10:26:56,813 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:27:10] 2025-06-03 10:26:56,813 | INFO     | update_server=False
[2025-06-03 06:27:10] 2025-06-03 10:26:56,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:27:10] 2025-06-03 10:26:56,814 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 06:27:10] 2025-06-03 10:26:56,814 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:27:10] 2025-06-03 10:26:56,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:27:10] 2025-06-03 10:26:56,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:27:10] 2025-06-03 10:26:56,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:27:10] 2025-06-03 10:26:57,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:27:10] 2025-06-03 10:26:57,019 | INFO     | aborting loop
[2025-06-03 06:27:10] 2025-06-03 10:26:57,023 | INFO     | all payload control threads have been joined
[2025-06-03 06:27:10] 2025-06-03 10:26:57,747 | INFO     | all data control threads have been joined
[2025-06-03 06:27:10] 2025-06-03 10:26:57,819 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:57,835 | INFO     | all job control threads have been joined
[2025-06-03 06:27:10] 2025-06-03 10:26:58,025 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,029 | INFO     | [payload] control thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,330 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,424 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,503 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,592 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,730 | INFO     | [job] validate thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,755 | INFO     | [data] control thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,840 | INFO     | [job] control thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,857 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:58,902 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:59,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:27:10] 2025-06-03 10:26:59,228 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:26:59,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:27:10] 2025-06-03 10:27:00,224 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:27:03,517 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:27:10] 2025-06-03 10:27:05,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915827377984)>', '<ExcThread(monitor, started 139915052439296)>']
[2025-06-03 06:27:10] 2025-06-03 10:27:05,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:27:10] 2025-06-03 10:27:05,865 | INFO     | [monitor] control thread has ended
[2025-06-03 06:27:10] 2025-06-03 10:27:10,291 | INFO     | all workflow threads have been joined
[2025-06-03 06:27:10] 2025-06-03 10:27:10,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:27:10] 2025-06-03 10:27:10,291 | INFO     | traces error code: 0
[2025-06-03 06:27:10] 2025-06-03 10:27:10,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:27:10] 2025-06-03 10:27:10,446 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:27:10] 2025-06-03 10:27:10,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:27:10] 2025-06-03 10:27:10,460 [wrapper] pilotpid: 1347133
[2025-06-03 06:27:10] 2025-06-03 10:27:10,463 [wrapper] Pilot exit status: 0
[2025-06-03 06:27:10] 2025-06-03 10:27:10,475 [wrapper] pandaids: 6677495123
[2025-06-03 06:27:10] 2025-06-03 10:27:10,585 [wrapper] cleanup supervisor_pilot 2095087 1347134
[2025-06-03 06:27:10] 2025-06-03 10:27:10,591 [wrapper] Test setup, not cleaning
[2025-06-03 06:27:10] 2025-06-03 10:27:10,594 [wrapper] apfmon messages muted
[2025-06-03 06:27:10] 2025-06-03 10:27:10,597 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:27:10] 2025-06-03 10:27:10,600 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:27:10]  *** Error codes and diagnostics ***
[2025-06-03 06:27:10]     "exeErrorCode": 0,
[2025-06-03 06:27:10]     "exeErrorDiag": "",
[2025-06-03 06:27:10]     "pilotErrorCode": 0,
[2025-06-03 06:27:10]     "pilotErrorDiag": "",
[2025-06-03 06:27:10]  *** Listing of results directory ***
[2025-06-03 06:27:10] total 386076
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 02:33 pilot3.tar.gz
[2025-06-03 06:27:10] -rwx------. 1 boincer umatlas     37140 Jun  3 02:34 runpilot2-wrapper.sh
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 02:34 queuedata.json
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas       100 Jun  3 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:27:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 05:20 run_atlas
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas       105 Jun  3 05:20 job.xml
[2025-06-03 06:27:10] -rw-r--r--. 2 boincer umatlas 213572529 Jun  3 05:20 EVNT.45006593._000898.pool.root.1
[2025-06-03 06:27:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:20 start_atlas.sh
[2025-06-03 06:27:10] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 05:20 shared
[2025-06-03 06:27:10] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 05:20 input.tar.gz
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas         0 Jun  3 05:20 boinc_lockfile
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas      2521 Jun  3 05:20 pandaJob.out
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas    985490 Jun  3 05:20 agis_schedconf.cvmfs.json
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas   1603667 Jun  3 05:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:27:10] drwx------. 4 boincer umatlas      4096 Jun  3 05:20 pilot3
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas      6936 Jun  3 06:18 init_data.xml
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas        95 Jun  3 06:26 pilot_heartbeat.json
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas       529 Jun  3 06:26 boinc_task_state.xml
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas 176578017 Jun  3 06:26 HITS.45006595._022433.pool.root.1
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas      1028 Jun  3 06:26 memory_monitor_summary.json
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas    285101 Jun  3 06:26 log.45006595._022433.job.log.tgz.1
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas      7680 Jun  3 06:26 heartbeat.json
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 06:27 boinc_mmap_file
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas        27 Jun  3 06:27 wrapper_checkpoint.txt
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas      4477 Jun  3 06:27 pilotlog.txt
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas    394587 Jun  3 06:27 log.45006595._022433.job.log.1
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas       357 Jun  3 06:27 output.list
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas       620 Jun  3 06:27 runtime_log
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas    696320 Jun  3 06:27 result.tar.gz
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 06:27 runtime_log.err
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas       650 Jun  3 06:27 paEMDmSPag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhRiKDmdqAkKn.diag
[2025-06-03 06:27:10] -rw-r--r--. 1 boincer umatlas     21320 Jun  3 06:27 stderr.txt
[2025-06-03 06:27:10] HITS file was successfully produced:
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas 176578017 Jun  3 06:26 shared/HITS.pool.root.1
[2025-06-03 06:27:10]  *** Contents of shared directory: ***
[2025-06-03 06:27:10] total 382212
[2025-06-03 06:27:10] -rw-r--r--. 2 boincer umatlas 213572529 Jun  3 05:20 ATLAS.root_0
[2025-06-03 06:27:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:20 start_atlas.sh
[2025-06-03 06:27:10] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 05:20 input.tar.gz
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas 176578017 Jun  3 06:26 HITS.pool.root.1
[2025-06-03 06:27:10] -rw-------. 1 boincer umatlas    696320 Jun  3 06:27 result.tar.gz
06:27:11 (1340727): run_atlas exited; CPU time 25040.532615
06:27:11 (1340727): called boinc_finish(0)

</stderr_txt>
]]>

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