Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:11:43 (1033549): wrapper (7.7.26015): starting
05:11:43 (1033549): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:11:43] Arguments: --nthreads 8
[2025-06-03 05:11:43] Threads: 8
[2025-06-03 05:11:43] Checking for CVMFS
[2025-06-03 05:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:11:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:11:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:11:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:11:43] 2.12.6.0 976873 21603 365340 146735 1 229 25468797 32935936 7283 16776704 1 99755266 99.497 121388899 24343 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 05:11:43] CVMFS is ok
[2025-06-03 05:11:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 05:11:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 05:11:43] Further information can be found at the LHC@home message board.
[2025-06-03 05:11:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:11:43] Checking for apptainer binary...
[2025-06-03 05:11:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:11:43] Running /usr/bin/apptainer --version
[2025-06-03 05:11:43] apptainer version 1.4.1-1.el9
[2025-06-03 05:11:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:11:44] c6-4-5-1.aglt2.org
[2025-06-03 05:11:44] apptainer works
[2025-06-03 05:11:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:11:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:11:44] Starting ATLAS job with PandaID=6677495096
[2025-06-03 05:11:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:26:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:26:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 06:26:55]  is_altstaged=None
[2025-06-03 06:26:55]  is_tar=False
[2025-06-03 06:26:55]  lfn=log.45006595._022406.job.log.tgz.1
[2025-06-03 06:26:55]  mtime=0
[2025-06-03 06:26:55]  protocol_id=None
[2025-06-03 06:26:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 06:26:55]  replicas=None
[2025-06-03 06:26:55]  scope=mc23_13p6TeV
[2025-06-03 06:26:55]  status=None
[2025-06-03 06:26:55]  status_code=0
[2025-06-03 06:26:55]  storage_token=
[2025-06-03 06:26:55]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6677495096/log.45006595._022406.job.log.tgz.1
[2025-06-03 06:26:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/39/log.45006595._022406.job.log.tgz.1
[2025-06-03 06:26:55]  workdir=None
[2025-06-03 06:26:55] ]
[2025-06-03 06:26:55] 2025-06-03 10:26:29,682 | INFO     | transferring file log.45006595._022406.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6677495096/log.45006595._022406.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 06:26:55] 2025-06-03 10:26:29,683 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6677495096/log.45006595._022406.job.log.tgz.1 /tmp/boinchome/slots/7/log.45006595._022406.job
[2025-06-03 06:26:55] 2025-06-03 10:26:29,698 | INFO     | adding to output.list: log.45006595._022406.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/39/log.45006595._022406.job.log.tg
[2025-06-03 06:26:55] 2025-06-03 10:26:29,699 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 06:26:55] 2025-06-03 10:26:29,699 | INFO     | summary of transferred files:
[2025-06-03 06:26:55] 2025-06-03 10:26:29,699 | INFO     |  -- lfn=log.45006595._022406.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 06:26:55] 2025-06-03 10:26:29,699 | INFO     | stage-out finished correctly
[2025-06-03 06:26:55] 2025-06-03 10:26:29,782 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 06:26:55] 2025-06-03 10:26:31,315 | INFO     | job 6677495096 has state=finished
[2025-06-03 06:26:55] 2025-06-03 10:26:31,316 | INFO     | preparing for final server update for job 6677495096 in state='finished'
[2025-06-03 06:26:55] 2025-06-03 10:26:31,316 | INFO     | this job has now completed (state=finished)
[2025-06-03 06:26:55] 2025-06-03 10:26:31,316 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 06:26:55] 2025-06-03 10:26:31,316 | INFO     | log transfer has been attempted: DONE
[2025-06-03 06:26:55] 2025-06-03 10:26:31,317 | INFO     | job 6677495096 has finished - writing final server update
[2025-06-03 06:26:55] 2025-06-03 10:26:31,317 | INFO     | total number of processed events: 400 (read)
[2025-06-03 06:26:55] 2025-06-03 10:26:31,333 | INFO     | executing command: lscpu
[2025-06-03 06:26:55] 2025-06-03 10:26:31,390 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 06:26:55] 2025-06-03 10:26:31,611 | INFO     | monitor loop #333: job 0:6677495096 is in state 'finished'
[2025-06-03 06:26:55] 2025-06-03 10:26:31,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:26:55] 2025-06-03 10:26:34,113 | INFO     | monitor loop #334: job 0:6677495096 is in state 'finished'
[2025-06-03 06:26:55] 2025-06-03 10:26:34,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 06:26:55] 2025-06-03 10:26:34,541 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 06:26:55] 2025-06-03 10:26:34,542 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677495096/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:26:55] 2025-06-03 10:26:34,542 | INFO     | extracted standard info from prmon json
[2025-06-03 06:26:55] 2025-06-03 10:26:34,543 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:26:55] 2025-06-03 10:26:34,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:26:55] 2025-06-03 10:26:34,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:26:55] 2025-06-03 10:26:34,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:26:55] 2025-06-03 10:26:34,545 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:26:55] 2025-06-03 10:26:34,545 | INFO     | sum of square deviations: 89127252.5
[2025-06-03 06:26:55] 2025-06-03 10:26:34,545 | INFO     | sum of deviations: 10200598973.999994
[2025-06-03 06:26:55] 2025-06-03 10:26:34,545 | INFO     | mean x: 1748944225.5
[2025-06-03 06:26:55] 2025-06-03 10:26:34,546 | INFO     | mean y: 2119546.787878788
[2025-06-03 06:26:55] 2025-06-03 10:26:34,546 | INFO     | -- intersect: -200164251252.29532
[2025-06-03 06:26:55] 2025-06-03 10:26:34,546 | INFO     | intersect: -200164251252.29532
[2025-06-03 06:26:55] 2025-06-03 10:26:34,546 | INFO     | chi2: 1.05170379048742
[2025-06-03 06:26:55] 2025-06-03 10:26:34,546 | INFO     | -- intersect: -200164251252.29532
[2025-06-03 06:26:55] 2025-06-03 10:26:34,546 | INFO     | current memory leak: 114.45 B/s (using 66 data points, chi2=1.05)
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | ..............................
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . Timing measurements:
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . get job = 0 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . initial setup = 2 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . payload setup = 5 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . stage-in = 0 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . payload execution = 4450 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . stage-out = 0 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | . log creation = 0 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,547 | INFO     | ..............................
[2025-06-03 06:26:55] 2025-06-03 10:26:34,846 | INFO     | 
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | job summary report
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | --------------------------------------------------
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | PanDA job id: 6677495096
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | task id: 45006595
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | errors: (none)
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | pilot state: finished 
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | transexitcode: 0
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | exeerrorcode: 0
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | exeerrordiag: 
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | exitcode: 0
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | exitmsg: OK
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | cpuconsumptiontime: 29985 s
[2025-06-03 06:26:55] 2025-06-03 10:26:34,847 | INFO     | nevents: 400
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | neventsw: 0
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | pid: 1043706
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | pgrp: 1043706
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | corecount: 8
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | event service: False
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | sizes: {0: 2404955, 1: 2405210, 5: 2405416, 12: 2405472, 4460: 2431556, 4462: 2440681, 4467: 2440795}
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | --------------------------------------------------
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | 
[2025-06-03 06:26:55] 2025-06-03 10:26:34,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-06-03 06:26:55] 2025-06-03 10:26:34,865 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,865 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:26:55] 2025-06-03 10:26:34,867 | INFO     | job 6677495096 has completed (purged errors)
[2025-06-03 06:26:55] 2025-06-03 10:26:34,867 | INFO     | overall cleanup function is called
[2025-06-03 06:26:55] 2025-06-03 10:26:35,874 | INFO     | --- collectZombieJob: --- 10, [1043706]
[2025-06-03 06:26:55] 2025-06-03 10:26:35,875 | INFO     | zombie collector waiting for pid 1043706
[2025-06-03 06:26:55] 2025-06-03 10:26:35,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:26:55] 2025-06-03 10:26:35,875 | INFO     | collected zombie processes
[2025-06-03 06:26:55] 2025-06-03 10:26:35,875 | INFO     | will attempt to kill all subprocesses of pid=1043706
[2025-06-03 06:26:55] 2025-06-03 10:26:36,116 | INFO     | process IDs to be killed: [1043706] (in reverse order)
[2025-06-03 06:26:55] 2025-06-03 10:26:36,186 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:26:55] 2025-06-03 10:26:36,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:26:55] 2025-06-03 10:26:36,195 | INFO     | did not find any defunct processes belonging to 1043706
[2025-06-03 06:26:55] 2025-06-03 10:26:36,202 | INFO     | did not find any defunct processes belonging to 1043706
[2025-06-03 06:26:55] 2025-06-03 10:26:36,203 | INFO     | ready for new job
[2025-06-03 06:26:55] 2025-06-03 10:26:36,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:26:55] 2025-06-03 10:26:36,204 | INFO     | **************************************
[2025-06-03 06:26:55] 2025-06-03 10:26:36,204 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:26:55] 2025-06-03 10:26:36,204 | INFO     | **************************************
[2025-06-03 06:26:55] 2025-06-03 10:26:36,204 | INFO     | 
[2025-06-03 06:26:55] 2025-06-03 10:26:36,220 | INFO     | architecture information:
[2025-06-03 06:26:55] 2025-06-03 10:26:36,220 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:26:55] 2025-06-03 10:26:36,233 | INFO     | cat /etc/os-release:
[2025-06-03 06:26:55] NAME="CentOS Linux"
[2025-06-03 06:26:55] VERSION="7 (Core)"
[2025-06-03 06:26:55] ID="centos"
[2025-06-03 06:26:55] ID_LIKE="rhel fedora"
[2025-06-03 06:26:55] VERSION_ID="7"
[2025-06-03 06:26:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:26:55] ANSI_COLOR="0;31"
[2025-06-03 06:26:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:26:55] HOME_URL="https://www.centos.org/"
[2025-06-03 06:26:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:26:55] 
[2025-06-03 06:26:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:26:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:26:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:26:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:26:55] 
[2025-06-03 06:26:55] 2025-06-03 10:26:36,233 | INFO     | **************************************
[2025-06-03 06:26:55] 2025-06-03 10:26:36,736 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-06-03 06:26:55] 2025-06-03 10:26:36,753 | INFO     | sufficient remaining disk space (72670511104 B)
[2025-06-03 06:26:55] 2025-06-03 10:26:36,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:26:55] 2025-06-03 10:26:36,753 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:26:55] 2025-06-03 10:26:36,754 | INFO     | update_server=False
[2025-06-03 06:26:55] 2025-06-03 10:26:36,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:26:55] 2025-06-03 10:26:36,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:26:55] 2025-06-03 10:26:36,792 | INFO     | all data control threads have been joined
[2025-06-03 06:26:55] 2025-06-03 10:26:37,089 | INFO     | PID=1037252 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 06:26:55] 2025-06-03 10:26:37,089 | INFO     | .. there are 10 such processes running
[2025-06-03 06:26:55] 2025-06-03 10:26:37,089 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:26:55] 2025-06-03 10:26:37,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:26:55] 2025-06-03 10:26:37,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:26:55] 2025-06-03 10:26:37,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:26:55] 2025-06-03 10:26:37,622 | INFO     | aborting loop
[2025-06-03 06:26:55] 2025-06-03 10:26:37,755 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:37,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:26:55] 2025-06-03 10:26:37,797 | INFO     | [data] control thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:37,809 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:38,112 | INFO     | all payload control threads have been joined
[2025-06-03 06:26:55] 2025-06-03 10:26:38,372 | INFO     | all job control threads have been joined
[2025-06-03 06:26:55] 2025-06-03 10:26:38,422 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:38,627 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:38,692 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:38,825 | INFO     | [job] validate thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:38,871 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:38,957 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:39,118 | INFO     | [payload] control thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:39,192 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:39,377 | INFO     | [job] control thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:39,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:26:55] 2025-06-03 10:26:39,798 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:40,651 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:40,761 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:47,413 | INFO     | job.realtimelogging is not enabled
[2025-06-03 06:26:55] 2025-06-03 10:26:48,418 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:26:55] 2025-06-03 10:26:50,000 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-06-03 06:26:55] 2025-06-03 10:26:50,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355800811328)>', '<ExcThread(monitor, started 140355018151680)>']
[2025-06-03 06:26:55] 2025-06-03 10:26:50,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:26:55] 2025-06-03 10:26:50,145 | INFO     | [monitor] control thread has ended
[2025-06-03 06:26:55] 2025-06-03 10:26:55,107 | INFO     | all workflow threads have been joined
[2025-06-03 06:26:55] 2025-06-03 10:26:55,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:26:55] 2025-06-03 10:26:55,107 | INFO     | traces error code: 0
[2025-06-03 06:26:55] 2025-06-03 10:26:55,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:26:55] 2025-06-03 10:26:55,258 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:26:55] 2025-06-03 10:26:55,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:26:55] 2025-06-03 10:26:55,263 [wrapper] pilotpid: 1037252
[2025-06-03 06:26:55] 2025-06-03 10:26:55,265 [wrapper] Pilot exit status: 0
[2025-06-03 06:26:55] 2025-06-03 10:26:55,274 [wrapper] pandaids: 6677495096
[2025-06-03 06:26:55] 2025-06-03 10:26:55,321 [wrapper] cleanup supervisor_pilot 1311874 1037253
[2025-06-03 06:26:55] 2025-06-03 10:26:55,324 [wrapper] Test setup, not cleaning
[2025-06-03 06:26:55] 2025-06-03 10:26:55,327 [wrapper] apfmon messages muted
[2025-06-03 06:26:55] 2025-06-03 10:26:55,329 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:26:55] 2025-06-03 10:26:55,332 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:26:55]  *** Error codes and diagnostics ***
[2025-06-03 06:26:55]     "exeErrorCode": 0,
[2025-06-03 06:26:55]     "exeErrorDiag": "",
[2025-06-03 06:26:55]     "pilotErrorCode": 0,
[2025-06-03 06:26:55]     "pilotErrorDiag": "",
[2025-06-03 06:26:55]  *** Listing of results directory ***
[2025-06-03 06:26:55] total 388220
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 02:32 queuedata.json
[2025-06-03 06:26:55] -rwx------. 1 boincer umatlas     37140 Jun  3 02:33 runpilot2-wrapper.sh
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 02:33 pilot3.tar.gz
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas       100 Jun  3 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:26:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 05:11 run_atlas
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas       105 Jun  3 05:11 job.xml
[2025-06-03 06:26:55] -rw-r--r--. 2 boincer umatlas 212917261 Jun  3 05:11 EVNT.45006593._000896.pool.root.1
[2025-06-03 06:26:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:11 start_atlas.sh
[2025-06-03 06:26:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 05:11 shared
[2025-06-03 06:26:55] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 05:11 input.tar.gz
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas         0 Jun  3 05:11 boinc_lockfile
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 05:11 pandaJob.out
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas    985498 Jun  3 05:11 agis_schedconf.cvmfs.json
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas   1603667 Jun  3 05:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:26:55] drwx------. 4 boincer umatlas      4096 Jun  3 05:11 pilot3
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas      6857 Jun  3 06:21 init_data.xml
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas 179261960 Jun  3 06:25 HITS.45006595._022406.pool.root.1
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas       529 Jun  3 06:26 boinc_task_state.xml
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas        95 Jun  3 06:26 pilot_heartbeat.json
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas      1037 Jun  3 06:26 memory_monitor_summary.json
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas    317380 Jun  3 06:26 log.45006595._022406.job.log.tgz.1
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas      7714 Jun  3 06:26 heartbeat.json
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas        27 Jun  3 06:26 wrapper_checkpoint.txt
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 06:26 boinc_mmap_file
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas      4821 Jun  3 06:26 pilotlog.txt
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas    446310 Jun  3 06:26 log.45006595._022406.job.log.1
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas       357 Jun  3 06:26 output.list
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas       620 Jun  3 06:26 runtime_log
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas    778240 Jun  3 06:26 result.tar.gz
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas      8659 Jun  3 06:26 runtime_log.err
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas       651 Jun  3 06:26 jCsNDmJOag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdXKDmIJFaJo.diag
[2025-06-03 06:26:55] -rw-r--r--. 1 boincer umatlas     21382 Jun  3 06:26 stderr.txt
[2025-06-03 06:26:55] HITS file was successfully produced:
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas 179261960 Jun  3 06:25 shared/HITS.pool.root.1
[2025-06-03 06:26:55]  *** Contents of shared directory: ***
[2025-06-03 06:26:55] total 384276
[2025-06-03 06:26:55] -rw-r--r--. 2 boincer umatlas 212917261 Jun  3 05:11 ATLAS.root_0
[2025-06-03 06:26:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 05:11 start_atlas.sh
[2025-06-03 06:26:55] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 05:11 input.tar.gz
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas 179261960 Jun  3 06:25 HITS.pool.root.1
[2025-06-03 06:26:55] -rw-------. 1 boincer umatlas    778240 Jun  3 06:26 result.tar.gz
06:26:57 (1033549): run_atlas exited; CPU time 30096.706250
06:26:57 (1033549): called boinc_finish(0)

</stderr_txt>
]]>

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