Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:40:41 (24592): wrapper (7.7.26015): starting
18:40:41 (24592): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:40:41] Arguments: --nthreads 8
[2025-06-03 18:40:41] Threads: 8
[2025-06-03 18:40:41] Checking for CVMFS
[2025-06-03 18:40:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:40:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:40:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:40:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:40:43] 2.11.2.0 16647 32187 99180 146749 2 52 17440962 25165824 3335 130560 0 17021740 99.736 20691337 4898 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 18:40:43] CVMFS is ok
[2025-06-03 18:40:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:40:43] Checking for apptainer binary...
[2025-06-03 18:40:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:40:43] Running /usr/bin/apptainer --version
[2025-06-03 18:40:43] apptainer version 1.3.2-1.el7
[2025-06-03 18:40:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:58:56] cg-vwn490.simple-grid.lan
[2025-06-03 21:58:56] apptainer works
[2025-06-03 21:58:56] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:58:56] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:58:56] Starting ATLAS job with PandaID=6677495164
[2025-06-03 21:58:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:32:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:32:27] 2025-06-03 23:31:55,861 | INFO     | sum of deviations: 14482330616.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,862 | INFO     | mean x: 1748987543.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,862 | INFO     | mean y: 2476279.414507772
[2025-06-04 01:32:27] 2025-06-03 23:31:55,862 | INFO     | -- intersect: -11360353018.483072
[2025-06-04 01:32:27] 2025-06-03 23:31:55,862 | INFO     | intersect: -11360353018.483072
[2025-06-04 01:32:27] 2025-06-03 23:31:55,862 | INFO     | chi2: 0.4063217548237933
[2025-06-04 01:32:27] 2025-06-03 23:31:55,862 | INFO     | current chi2=0.4063217548237933 (change=91.38995633532187 %)
[2025-06-04 01:32:27] 2025-06-03 23:31:55,863 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,869 | INFO     | sum of deviations: 212958289.4999998
[2025-06-04 01:32:27] 2025-06-03 23:31:55,869 | INFO     | mean x: 1748987695.5
[2025-06-04 01:32:27] 2025-06-03 23:31:55,869 | INFO     | mean y: 2489007.920212766
[2025-06-04 01:32:27] 2025-06-03 23:31:55,869 | INFO     | -- intersect: -178287344.8279903
[2025-06-04 01:32:27] 2025-06-03 23:31:55,870 | INFO     | intersect: -178287344.8279903
[2025-06-04 01:32:27] 2025-06-03 23:31:55,870 | INFO     | chi2: 0.03429668873081763
[2025-06-04 01:32:27] 2025-06-03 23:31:55,870 | INFO     | current chi2=0.03429668873081763 (change=91.55922902880481 %)
[2025-06-04 01:32:27] 2025-06-03 23:31:55,870 | INFO     | sum of square deviations: 1900284932.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,871 | INFO     | sum of deviations: 4607372639.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,872 | INFO     | mean x: 1748987848.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,872 | INFO     | mean y: 2484850.7650273223
[2025-06-04 01:32:27] 2025-06-03 23:31:55,872 | INFO     | -- intersect: -4238057512.7096996
[2025-06-04 01:32:27] 2025-06-03 23:31:55,872 | INFO     | intersect: -4238057512.7096996
[2025-06-04 01:32:27] 2025-06-03 23:31:55,872 | INFO     | chi2: 0.0022312258132082085
[2025-06-04 01:32:27] 2025-06-03 23:31:55,872 | INFO     | current chi2=0.0022312258132082085 (change=93.49434042825447 %)
[2025-06-04 01:32:27] 2025-06-03 23:31:55,873 | INFO     | sum of square deviations: 1748737904.5
[2025-06-04 01:32:27] 2025-06-03 23:31:55,874 | INFO     | sum of deviations: 3312385064.5
[2025-06-04 01:32:27] 2025-06-03 23:31:55,874 | INFO     | mean x: 1748988000.5
[2025-06-04 01:32:27] 2025-06-03 23:31:55,874 | INFO     | mean y: 2486149.724719101
[2025-06-04 01:32:27] 2025-06-03 23:31:55,874 | INFO     | -- intersect: -3310372635.996145
[2025-06-04 01:32:27] 2025-06-03 23:31:55,874 | INFO     | intersect: -3310372635.996145
[2025-06-04 01:32:27] 2025-06-03 23:31:55,874 | INFO     | chi2: 0.001128168767173937
[2025-06-04 01:32:27] 2025-06-03 23:31:55,875 | INFO     | current chi2=0.001128168767173937 (change=49.43726625536933 %)
[2025-06-04 01:32:27] 2025-06-03 23:31:55,875 | INFO     | sum of square deviations: 1605470102.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,876 | INFO     | sum of deviations: 2540916631.0000005
[2025-06-04 01:32:27] 2025-06-03 23:31:55,876 | INFO     | mean x: 1748988153.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,876 | INFO     | mean y: 2486970.358381503
[2025-06-04 01:32:27] 2025-06-03 23:31:55,876 | INFO     | -- intersect: -2765570235.9661455
[2025-06-04 01:32:27] 2025-06-03 23:31:55,876 | INFO     | intersect: -2765570235.9661455
[2025-06-04 01:32:27] 2025-06-03 23:31:55,877 | INFO     | chi2: 0.0008163574065903375
[2025-06-04 01:32:27] 2025-06-03 23:31:55,877 | INFO     | current chi2=0.0008163574065903375 (change=27.63871591346097 %)
[2025-06-04 01:32:27] 2025-06-03 23:31:55,877 | INFO     | sum of square deviations: 1470248962.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,878 | INFO     | sum of deviations: 1986388017.9999998
[2025-06-04 01:32:27] 2025-06-03 23:31:55,878 | INFO     | mean x: 1748988305.5
[2025-06-04 01:32:27] 2025-06-03 23:31:55,878 | INFO     | mean y: 2487595.011904762
[2025-06-04 01:32:27] 2025-06-03 23:31:55,879 | INFO     | -- intersect: -2360492759.649501
[2025-06-04 01:32:27] 2025-06-03 23:31:55,879 | INFO     | intersect: -2360492759.649501
[2025-06-04 01:32:27] 2025-06-03 23:31:55,879 | INFO     | chi2: 0.0006612920206174235
[2025-06-04 01:32:27] 2025-06-03 23:31:55,889 | INFO     | current chi2=0.0006612920206174235 (change=18.99479134029938 %)
[2025-06-04 01:32:27] 2025-06-03 23:31:55,889 | INFO     | left removable region: 60
[2025-06-04 01:32:27] 2025-06-03 23:31:55,890 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 01:32:27] 2025-06-03 23:31:55,890 | INFO     | sum of deviations: 179066079.49999997
[2025-06-04 01:32:27] 2025-06-03 23:31:55,891 | INFO     | mean x: 1748989037.5
[2025-06-04 01:32:27] 2025-06-03 23:31:55,891 | INFO     | mean y: 2489821.977272727
[2025-06-04 01:32:27] 2025-06-03 23:31:55,891 | INFO     | -- intersect: -436672548.6576602
[2025-06-04 01:32:27] 2025-06-03 23:31:55,891 | INFO     | intersect: -436672548.6576602
[2025-06-04 01:32:27] 2025-06-03 23:31:55,891 | INFO     | chi2: 5.1384521141386245e-05
[2025-06-04 01:32:27] 2025-06-03 23:31:55,891 | INFO     | -- intersect: -436672548.6576602
[2025-06-04 01:32:27] 2025-06-03 23:31:55,891 | INFO     | current memory leak: 0.25 B/s (using 132 data points, chi2=0.00)
[2025-06-04 01:32:27] 2025-06-03 23:31:55,892 | INFO     | ..............................
[2025-06-04 01:32:27] 2025-06-03 23:31:55,892 | INFO     | . Timing measurements:
[2025-06-04 01:32:27] 2025-06-03 23:31:55,892 | INFO     | . get job = 0 s
[2025-06-04 01:32:27] 2025-06-03 23:31:55,892 | INFO     | . initial setup = 8 s
[2025-06-04 01:32:27] 2025-06-03 23:31:55,893 | INFO     | . payload setup = 152 s
[2025-06-04 01:32:27] 2025-06-03 23:31:55,893 | INFO     | . stage-in = 0 s
[2025-06-04 01:32:27] 2025-06-03 23:31:55,893 | INFO     | . payload execution = 12200 s
[2025-06-04 01:32:27] 2025-06-03 23:31:55,893 | INFO     | . stage-out = 3 s
[2025-06-04 01:32:27] 2025-06-03 23:31:55,893 | INFO     | . log creation = 1 s
[2025-06-04 01:32:27] 2025-06-03 23:31:55,893 | INFO     | ..............................
[2025-06-04 01:32:27] 2025-06-03 23:31:56,031 | INFO     | 
[2025-06-04 01:32:27] 2025-06-03 23:31:56,031 | INFO     | job summary report
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | --------------------------------------------------
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | PanDA job id: 6677495164
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | task id: 45006595
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | errors: (none)
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | pilot state: finished 
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | transexitcode: 0
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | exeerrorcode: 0
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | exeerrordiag: 
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | exitcode: 0
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | exitmsg: OK
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | cpuconsumptiontime: 44281 s
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | nevents: 400
[2025-06-04 01:32:27] 2025-06-03 23:31:56,032 | INFO     | neventsw: 0
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | pid: 20742
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | pgrp: 20742
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | corecount: 8
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | event service: False
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 66: 2405506, 76: 2405534, 86: 2405796, 87: 2405824, 12357: 2435118
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | --------------------------------------------------
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | 
[2025-06-04 01:32:27] 2025-06-03 23:31:56,033 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 01:32:27] 2025-06-03 23:31:56,441 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | job 6677495164 has completed (purged errors)
[2025-06-04 01:32:27] 2025-06-03 23:31:56,443 | INFO     | overall cleanup function is called
[2025-06-04 01:32:27] 2025-06-03 23:31:57,452 | INFO     | --- collectZombieJob: --- 10, [20742]
[2025-06-04 01:32:27] 2025-06-03 23:31:57,452 | INFO     | zombie collector waiting for pid 20742
[2025-06-04 01:32:27] 2025-06-03 23:31:57,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:32:27] 2025-06-03 23:31:57,453 | INFO     | collected zombie processes
[2025-06-04 01:32:27] 2025-06-03 23:31:57,453 | INFO     | will attempt to kill all subprocesses of pid=20742
[2025-06-04 01:32:27] 2025-06-03 23:31:57,548 | INFO     | process IDs to be killed: [20742] (in reverse order)
[2025-06-04 01:32:27] 2025-06-03 23:31:58,262 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:32:27] 2025-06-03 23:31:58,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:32:27] 2025-06-03 23:31:58,265 | INFO     | did not find any defunct processes belonging to 20742
[2025-06-04 01:32:27] 2025-06-03 23:31:58,268 | INFO     | did not find any defunct processes belonging to 20742
[2025-06-04 01:32:27] 2025-06-03 23:31:58,268 | INFO     | ready for new job
[2025-06-04 01:32:27] 2025-06-03 23:31:58,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:32:27] 2025-06-03 23:31:58,270 | INFO     | **************************************
[2025-06-04 01:32:27] 2025-06-03 23:31:58,270 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:32:27] 2025-06-03 23:31:58,270 | INFO     | **************************************
[2025-06-04 01:32:27] 2025-06-03 23:31:58,271 | INFO     | 
[2025-06-04 01:32:27] 2025-06-03 23:31:58,271 | INFO     | pilot is running in a VM
[2025-06-04 01:32:27] 2025-06-03 23:31:58,271 | INFO     | architecture information:
[2025-06-04 01:32:27] 2025-06-03 23:31:58,277 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:32:27] 2025-06-03 23:31:58,577 | INFO     | cat /etc/os-release:
[2025-06-04 01:32:27] NAME="CentOS Linux"
[2025-06-04 01:32:27] VERSION="7 (Core)"
[2025-06-04 01:32:27] ID="centos"
[2025-06-04 01:32:27] ID_LIKE="rhel fedora"
[2025-06-04 01:32:27] VERSION_ID="7"
[2025-06-04 01:32:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:32:27] ANSI_COLOR="0;31"
[2025-06-04 01:32:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:32:27] HOME_URL="https://www.centos.org/"
[2025-06-04 01:32:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:32:27] 
[2025-06-04 01:32:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:32:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:32:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:32:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:32:27] 
[2025-06-04 01:32:27] 2025-06-03 23:31:58,577 | INFO     | **************************************
[2025-06-04 01:32:27] 2025-06-03 23:31:59,080 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 01:32:27] 2025-06-03 23:31:59,251 | INFO     | sufficient remaining disk space (496940089344 B)
[2025-06-04 01:32:27] 2025-06-03 23:31:59,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:32:27] 2025-06-03 23:31:59,252 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:32:27] 2025-06-03 23:31:59,252 | INFO     | update_server=False
[2025-06-04 01:32:27] 2025-06-03 23:31:59,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:32:27] 2025-06-03 23:31:59,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:32:27] 2025-06-03 23:31:59,467 | INFO     | all data control threads have been joined
[2025-06-04 01:32:27] 2025-06-03 23:31:59,521 | INFO     | all job control threads have been joined
[2025-06-04 01:32:27] 2025-06-03 23:31:59,816 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:32:27] 2025-06-03 23:31:59,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:32:27] 2025-06-03 23:31:59,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:32:27] 2025-06-03 23:31:59,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:32:27] 2025-06-03 23:32:00,168 | INFO     | all payload control threads have been joined
[2025-06-04 01:32:27] 2025-06-03 23:32:00,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:32:27] 2025-06-03 23:32:00,184 | INFO     | aborting loop
[2025-06-04 01:32:27] 2025-06-03 23:32:00,261 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:00,473 | INFO     | [data] control thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:00,527 | INFO     | [job] control thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:00,535 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:00,579 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:32:27] 2025-06-03 23:32:01,173 | INFO     | [payload] control thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,190 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,246 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,259 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,364 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,478 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,552 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:01,686 | INFO     | [job] validate thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:02,051 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:03,937 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:32:27] 2025-06-03 23:32:05,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705313253184)>', '<ExcThread(monitor, started 139704582256384)>']
[2025-06-04 01:32:27] 2025-06-03 23:32:05,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:32:27] 2025-06-03 23:32:05,851 | INFO     | [monitor] control thread has ended
[2025-06-04 01:32:27] 2025-06-03 23:32:10,818 | INFO     | all workflow threads have been joined
[2025-06-04 01:32:27] 2025-06-03 23:32:10,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:32:27] 2025-06-03 23:32:10,819 | INFO     | traces error code: 0
[2025-06-04 01:32:27] 2025-06-03 23:32:10,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:32:27] 2025-06-03 23:32:11,167 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:32:27] 2025-06-03 23:32:11,238 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:32:27] 2025-06-03 23:32:11,312 [wrapper] pilotpid: 10134
[2025-06-04 01:32:27] 2025-06-03 23:32:11,414 [wrapper] Pilot exit status: 0
[2025-06-04 01:32:27] 2025-06-03 23:32:11,864 [wrapper] pandaids: 6677495164
[2025-06-04 01:32:27] 2025-06-03 23:32:12,370 [wrapper] cleanup supervisor_pilot 32470 10135
[2025-06-04 01:32:27] 2025-06-03 23:32:12,486 [wrapper] Test setup, not cleaning
[2025-06-04 01:32:27] 2025-06-03 23:32:12,595 [wrapper] apfmon messages muted
[2025-06-04 01:32:27] 2025-06-03 23:32:12,678 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:32:27] 2025-06-03 23:32:12,768 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:32:27]  *** Error codes and diagnostics ***
[2025-06-04 01:32:27]     "exeErrorCode": 0,
[2025-06-04 01:32:27]     "exeErrorDiag": "",
[2025-06-04 01:32:27]     "pilotErrorCode": 0,
[2025-06-04 01:32:27]     "pilotErrorDiag": "",
[2025-06-04 01:32:27]  *** Listing of results directory ***
[2025-06-04 01:32:27] total 388496
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:33 pilot3.tar.gz
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:35 queuedata.json
[2025-06-04 01:32:27] -rwx------. 1 boinc boinc     37140 Jun  3 08:37 runpilot2-wrapper.sh
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc       100 Jun  3 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:32:27] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 18:40 run_atlas
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc       105 Jun  3 18:40 job.xml
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc      6392 Jun  3 18:40 init_data.xml
[2025-06-04 01:32:27] -rw-r--r--. 2 boinc boinc 215031730 Jun  3 18:40 EVNT.45006593._000899.pool.root.1
[2025-06-04 01:32:27] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:40 start_atlas.sh
[2025-06-04 01:32:27] drwxrwx--x. 2 boinc boinc        68 Jun  3 18:40 shared
[2025-06-04 01:32:27] -rw-r--r--. 2 boinc boinc    508885 Jun  3 18:40 input.tar.gz
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc         0 Jun  3 18:40 boinc_lockfile
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc      2524 Jun  3 21:58 pandaJob.out
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc    986893 Jun  3 22:01 agis_schedconf.cvmfs.json
[2025-06-04 01:32:27] drwx------. 4 boinc boinc      4096 Jun  3 22:01 pilot3
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc 176017553 Jun  4 01:29 HITS.45006595._022474.pool.root.1
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc       531 Jun  4 01:30 boinc_task_state.xml
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc      1020 Jun  4 01:30 memory_monitor_summary.json
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc   1603667 Jun  4 01:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc    378681 Jun  4 01:30 log.45006595._022474.job.log.tgz.1
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc        95 Jun  4 01:31 pilot_heartbeat.json
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc      7688 Jun  4 01:31 heartbeat.json
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc      4416 Jun  4 01:32 pilotlog.txt
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc   1100011 Jun  4 01:32 log.45006595._022474.job.log.1
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc       357 Jun  4 01:32 output.list
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc       620 Jun  4 01:32 runtime_log
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc   1495040 Jun  4 01:32 result.tar.gz
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc      8659 Jun  4 01:32 runtime_log.err
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc       657 Jun  4 01:32 p0jMDmOSag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmISiKDmIJwj3m.diag
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc      8192 Jun  4 01:32 boinc_mmap_file
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc        28 Jun  4 01:32 wrapper_checkpoint.txt
[2025-06-04 01:32:27] -rw-r--r--. 1 boinc boinc     20480 Jun  4 01:32 stderr.txt
[2025-06-04 01:32:27] HITS file was successfully produced:
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc 176017553 Jun  4 01:29 shared/HITS.pool.root.1
[2025-06-04 01:32:27]  *** Contents of shared directory: ***
[2025-06-04 01:32:27] total 383864
[2025-06-04 01:32:27] -rw-r--r--. 2 boinc boinc 215031730 Jun  3 18:40 ATLAS.root_0
[2025-06-04 01:32:27] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:40 start_atlas.sh
[2025-06-04 01:32:27] -rw-r--r--. 2 boinc boinc    508885 Jun  3 18:40 input.tar.gz
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc 176017553 Jun  4 01:29 HITS.pool.root.1
[2025-06-04 01:32:27] -rw-------. 1 boinc boinc   1495040 Jun  4 01:32 result.tar.gz
01:32:29 (24592): run_atlas exited; CPU time 44435.202445
01:32:29 (24592): called boinc_finish(0)

</stderr_txt>
]]>

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