Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:04:41 (23069): wrapper (7.7.26015): starting
17:04:41 (23069): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:04:41] Arguments: --nthreads 8
[2025-06-03 17:04:41] Threads: 8
[2025-06-03 17:04:41] Checking for CVMFS
[2025-06-03 17:04:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:04:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:04:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:04:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:04:42] 2.11.2.0 28641 31939 93496 146743 1 298 15601106 25165824 3188 130560 0 17309367 99.825 18800369 1950 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:04:42] CVMFS is ok
[2025-06-03 17:04:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:04:42] Checking for apptainer binary...
[2025-06-03 17:04:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:04:42] Running /usr/bin/apptainer --version
[2025-06-03 17:04:42] apptainer version 1.3.2-1.el7
[2025-06-03 17:04:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:04:44] cg-vwn402.simple-grid.lan
[2025-06-03 17:04:44] apptainer works
[2025-06-03 17:04:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:04:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:04:44] Starting ATLAS job with PandaID=6677495271
[2025-06-03 17:04:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:12:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:12:22] 2025-06-03 18:47:48,557 | INFO     | extracted standard info from prmon json
[2025-06-03 23:12:22] 2025-06-03 18:47:48,557 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:12:22] 2025-06-03 18:47:48,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:12:22] 2025-06-03 18:47:48,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:12:22] 2025-06-03 18:47:48,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:12:22] 2025-06-03 18:47:48,562 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:12:22] 2025-06-03 18:47:48,563 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 23:12:22] 2025-06-03 18:47:48,565 | INFO     | sum of deviations: 24802926380.499992
[2025-06-03 23:12:22] 2025-06-03 18:47:48,565 | INFO     | mean x: 1748969852.5
[2025-06-03 23:12:22] 2025-06-03 18:47:48,565 | INFO     | mean y: 2449915.8925233646
[2025-06-03 23:12:22] 2025-06-03 18:47:48,565 | INFO     | -- intersect: -14272512944.965391
[2025-06-03 23:12:22] 2025-06-03 18:47:48,565 | INFO     | intersect: -14272512944.965391
[2025-06-03 23:12:22] 2025-06-03 18:47:48,566 | INFO     | chi2: 2.2256799221042654
[2025-06-03 23:12:22] 2025-06-03 18:47:48,566 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,568 | INFO     | sum of deviations: 37932520844.000015
[2025-06-03 23:12:22] 2025-06-03 18:47:48,568 | INFO     | mean x: 1748969700.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,568 | INFO     | mean y: 2459343.3971291864
[2025-06-03 23:12:22] 2025-06-03 18:47:48,568 | INFO     | -- intersect: -23433711269.951973
[2025-06-03 23:12:22] 2025-06-03 18:47:48,568 | INFO     | intersect: -23433711269.951973
[2025-06-03 23:12:22] 2025-06-03 18:47:48,569 | INFO     | chi2: 1.4525727124563341
[2025-06-03 23:12:22] 2025-06-03 18:47:48,569 | INFO     | current chi2=1.4525727124563341 (change=34.73577678307842 %)
[2025-06-03 23:12:22] 2025-06-03 18:47:48,569 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,571 | INFO     | sum of deviations: 36731066277.5
[2025-06-03 23:12:22] 2025-06-03 18:47:48,571 | INFO     | mean x: 1748969547.5
[2025-06-03 23:12:22] 2025-06-03 18:47:48,571 | INFO     | mean y: 2458419.4852941176
[2025-06-03 23:12:22] 2025-06-03 18:47:48,571 | INFO     | -- intersect: -24401332369.418987
[2025-06-03 23:12:22] 2025-06-03 18:47:48,571 | INFO     | intersect: -24401332369.418987
[2025-06-03 23:12:22] 2025-06-03 18:47:48,577 | INFO     | chi2: 1.4532245802358035
[2025-06-03 23:12:22] 2025-06-03 18:47:48,577 | INFO     | current chi2=1.4532245802358035 (change=-0.044876774420953225 %)
[2025-06-03 23:12:22] 2025-06-03 18:47:48,578 | INFO     | right removable region: 203
[2025-06-03 23:12:22] 2025-06-03 18:47:48,578 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,580 | INFO     | sum of deviations: -7456700268.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,580 | INFO     | mean x: 1748970005.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,580 | INFO     | mean y: 2473316.7033492825
[2025-06-03 23:12:22] 2025-06-03 18:47:48,580 | INFO     | -- intersect: 4609510399.412808
[2025-06-03 23:12:22] 2025-06-03 18:47:48,580 | INFO     | intersect: 4609510399.412808
[2025-06-03 23:12:22] 2025-06-03 18:47:48,581 | INFO     | chi2: 0.8119270741128461
[2025-06-03 23:12:22] 2025-06-03 18:47:48,581 | INFO     | current chi2=0.8119270741128461 (change=63.520043198969454 %)
[2025-06-03 23:12:22] 2025-06-03 18:47:48,581 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,583 | INFO     | sum of deviations: -5779775833.499999
[2025-06-03 23:12:22] 2025-06-03 18:47:48,583 | INFO     | mean x: 1748970157.5
[2025-06-03 23:12:22] 2025-06-03 18:47:48,583 | INFO     | mean y: 2472014.1715686275
[2025-06-03 23:12:22] 2025-06-03 18:47:48,583 | INFO     | -- intersect: 3842504546.2062583
[2025-06-03 23:12:22] 2025-06-03 18:47:48,583 | INFO     | intersect: 3842504546.2062583
[2025-06-03 23:12:22] 2025-06-03 18:47:48,584 | INFO     | chi2: 0.7945874113653768
[2025-06-03 23:12:22] 2025-06-03 18:47:48,584 | INFO     | current chi2=0.7945874113653768 (change=2.1356182470470717 %)
[2025-06-03 23:12:22] 2025-06-03 18:47:48,584 | INFO     | left removable region: 20
[2025-06-03 23:12:22] 2025-06-03 18:47:48,584 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,586 | INFO     | sum of deviations: 4249289341.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,586 | INFO     | mean x: 1748970127.0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,586 | INFO     | mean y: 2484468.010928962
[2025-06-03 23:12:22] 2025-06-03 18:47:48,586 | INFO     | -- intersect: -3908444884.339751
[2025-06-03 23:12:22] 2025-06-03 18:47:48,586 | INFO     | intersect: -3908444884.339751
[2025-06-03 23:12:22] 2025-06-03 18:47:48,587 | INFO     | chi2: 0.00033366336288949915
[2025-06-03 23:12:22] 2025-06-03 18:47:48,587 | INFO     | -- intersect: -3908444884.339751
[2025-06-03 23:12:22] 2025-06-03 18:47:48,587 | INFO     | current memory leak: 2.24 B/s (using 183 data points, chi2=0.00)
[2025-06-03 23:12:22] 2025-06-03 18:47:48,588 | INFO     | ..............................
[2025-06-03 23:12:22] 2025-06-03 18:47:48,588 | INFO     | . Timing measurements:
[2025-06-03 23:12:22] 2025-06-03 18:47:48,588 | INFO     | . get job = 0 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,588 | INFO     | . initial setup = 7 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,588 | INFO     | . payload setup = 16 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,588 | INFO     | . stage-in = 0 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,588 | INFO     | . payload execution = 13047 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,589 | INFO     | . stage-out = 3 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,589 | INFO     | . log creation = 1 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,589 | INFO     | ..............................
[2025-06-03 23:12:22] 2025-06-03 18:47:48,934 | INFO     | 
[2025-06-03 23:12:22] 2025-06-03 18:47:48,934 | INFO     | job summary report
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | --------------------------------------------------
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | PanDA job id: 6677495271
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | task id: 45006595
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | errors: (none)
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | pilot state: finished 
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | transexitcode: 0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | exeerrorcode: 0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,935 | INFO     | exeerrordiag: 
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | exitcode: 0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | exitmsg: OK
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | cpuconsumptiontime: 48311 s
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | nevents: 400
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | neventsw: 0
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | pid: 2161
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | pgrp: 2161
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | corecount: 8
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | event service: False
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | sizes: {0: 2405182, 1: 2405182, 12: 2405210, 22: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 65: 2405506, 76: 2405534, 87: 2405590, 89: 2405824, 97: 2406132, 1
[2025-06-03 23:12:22] 2025-06-03 18:47:48,936 | INFO     | --------------------------------------------------
[2025-06-03 23:12:22] 2025-06-03 18:47:48,937 | INFO     | 
[2025-06-03 23:12:22] 2025-06-03 18:47:48,937 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 23:12:22] 2025-06-03 18:47:49,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,547 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:12:22] 2025-06-03 18:47:49,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,547 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:12:22] 2025-06-03 18:47:49,547 | INFO     | job 6677495271 has completed (purged errors)
[2025-06-03 23:12:22] 2025-06-03 18:47:49,547 | INFO     | overall cleanup function is called
[2025-06-03 23:12:22] 2025-06-03 18:47:50,557 | INFO     | --- collectZombieJob: --- 10, [2161]
[2025-06-03 23:12:22] 2025-06-03 18:47:50,557 | INFO     | zombie collector waiting for pid 2161
[2025-06-03 23:12:22] 2025-06-03 18:47:50,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:12:22] 2025-06-03 18:47:50,558 | INFO     | collected zombie processes
[2025-06-03 23:12:22] 2025-06-03 18:47:50,558 | INFO     | will attempt to kill all subprocesses of pid=2161
[2025-06-03 23:12:22] 2025-06-03 18:47:50,706 | INFO     | process IDs to be killed: [2161] (in reverse order)
[2025-06-03 23:12:22] 2025-06-03 18:47:51,488 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:12:22] 2025-06-03 18:47:51,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:12:22] 2025-06-03 18:47:51,492 | INFO     | did not find any defunct processes belonging to 2161
[2025-06-03 23:12:22] 2025-06-03 18:47:51,495 | INFO     | did not find any defunct processes belonging to 2161
[2025-06-03 23:12:22] 2025-06-03 18:47:51,501 | INFO     | ready for new job
[2025-06-03 23:12:22] 2025-06-03 18:47:51,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:12:22] 2025-06-03 18:47:51,504 | INFO     | **************************************
[2025-06-03 23:12:22] 2025-06-03 18:47:51,504 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:12:22] 2025-06-03 18:47:51,504 | INFO     | **************************************
[2025-06-03 23:12:22] 2025-06-03 18:47:51,504 | INFO     | 
[2025-06-03 23:12:22] 2025-06-03 18:47:51,505 | INFO     | pilot is running in a VM
[2025-06-03 23:12:22] 2025-06-03 18:47:51,505 | INFO     | architecture information:
[2025-06-03 23:12:22] 2025-06-03 18:47:51,506 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:12:22] 2025-06-03 18:47:51,643 | INFO     | cat /etc/os-release:
[2025-06-03 23:12:22] NAME="CentOS Linux"
[2025-06-03 23:12:22] VERSION="7 (Core)"
[2025-06-03 23:12:22] ID="centos"
[2025-06-03 23:12:22] ID_LIKE="rhel fedora"
[2025-06-03 23:12:22] VERSION_ID="7"
[2025-06-03 23:12:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:12:22] ANSI_COLOR="0;31"
[2025-06-03 23:12:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:12:22] HOME_URL="https://www.centos.org/"
[2025-06-03 23:12:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:12:22] 
[2025-06-03 23:12:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:12:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:12:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:12:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:12:22] 
[2025-06-03 23:12:22] 2025-06-03 18:47:51,643 | INFO     | **************************************
[2025-06-03 23:12:22] 2025-06-03 18:47:52,146 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 23:12:22] 2025-06-03 18:47:52,306 | INFO     | sufficient remaining disk space (497312333824 B)
[2025-06-03 23:12:22] 2025-06-03 18:47:52,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:12:22] 2025-06-03 18:47:52,307 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:12:22] 2025-06-03 18:47:52,307 | INFO     | update_server=False
[2025-06-03 23:12:22] 2025-06-03 18:47:52,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:12:22] 2025-06-03 18:47:52,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:12:22] 2025-06-03 18:47:52,307 | INFO     | aborting loop
[2025-06-03 23:12:22] 2025-06-03 18:47:52,308 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 23:12:22] 2025-06-03 18:47:52,309 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:12:22] 2025-06-03 18:47:52,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:12:22] 2025-06-03 18:47:52,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:12:22] 2025-06-03 18:47:52,570 | INFO     | all data control threads have been joined
[2025-06-03 23:12:22] 2025-06-03 18:47:53,289 | INFO     | all job control threads have been joined
[2025-06-03 23:12:22] 2025-06-03 18:47:53,293 | INFO     | all payload control threads have been joined
[2025-06-03 23:12:22] 2025-06-03 18:47:53,312 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:53,313 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:53,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:12:22] 2025-06-03 18:47:53,576 | INFO     | [data] control thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:53,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:12:22] 2025-06-03 18:47:53,809 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:53,937 | INFO     | [job] validate thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:53,978 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,189 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,295 | INFO     | [job] control thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,299 | INFO     | [payload] control thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,336 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,485 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,667 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:54,746 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:55,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:12:22] 2025-06-03 18:47:55,568 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:47:59,285 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:12:22] 2025-06-03 18:48:00,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122217985856)>', '<ExcThread(monitor, started 140121538021120)>']
[2025-06-03 23:12:22] 2025-06-03 18:48:01,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:12:22] 2025-06-03 18:48:01,361 | INFO     | [monitor] control thread has ended
[2025-06-03 23:12:22] 2025-06-03 18:48:05,614 | INFO     | all workflow threads have been joined
[2025-06-03 23:12:22] 2025-06-03 18:48:05,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:12:22] 2025-06-03 18:48:05,615 | INFO     | traces error code: 0
[2025-06-03 23:12:22] 2025-06-03 18:48:05,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:12:22] 2025-06-03 18:48:05,885 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:12:22] 2025-06-03 18:48:05,893 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:12:22] 2025-06-03 18:48:05,900 [wrapper] pilotpid: 27834
[2025-06-03 23:12:22] 2025-06-03 18:48:05,970 [wrapper] Pilot exit status: 0
[2025-06-03 23:12:22] 2025-06-03 18:48:06,324 [wrapper] pandaids: 6677495271
[2025-06-03 23:12:22] 2025-06-03 18:48:07,044 [wrapper] cleanup supervisor_pilot 27931 27835
[2025-06-03 23:12:22] 2025-06-03 18:48:07,124 [wrapper] Test setup, not cleaning
[2025-06-03 23:12:22] 2025-06-03 18:48:07,183 [wrapper] apfmon messages muted
[2025-06-03 23:12:22] 2025-06-03 18:48:07,266 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:12:22] 2025-06-03 18:48:07,310 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:12:22]  *** Error codes and diagnostics ***
[2025-06-03 23:12:22]     "exeErrorCode": 0,
[2025-06-03 23:12:22]     "exeErrorDiag": "",
[2025-06-03 23:12:22]     "pilotErrorCode": 0,
[2025-06-03 23:12:22]     "pilotErrorDiag": "",
[2025-06-03 23:12:22]  *** Listing of results directory ***
[2025-06-03 23:12:22] total 385880
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:33 pilot3.tar.gz
[2025-06-03 23:12:22] -rwx------. 1 boinc boinc     37140 Jun  3 08:39 runpilot2-wrapper.sh
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:39 queuedata.json
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:12:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:04 run_atlas
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:04 job.xml
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc      6390 Jun  3 17:04 init_data.xml
[2025-06-03 23:12:22] -rw-r--r--. 2 boinc boinc 216216173 Jun  3 17:04 EVNT.45006593._000903.pool.root.1
[2025-06-03 23:12:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:04 start_atlas.sh
[2025-06-03 23:12:22] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:04 shared
[2025-06-03 23:12:22] -rw-r--r--. 2 boinc boinc    508875 Jun  3 17:04 input.tar.gz
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:04 boinc_lockfile
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:04 pandaJob.out
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc    982724 Jun  3 17:06 agis_schedconf.cvmfs.json
[2025-06-03 23:12:22] drwx------. 4 boinc boinc      4096 Jun  3 17:06 pilot3
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc 171994420 Jun  3 20:45 HITS.45006595._022581.pool.root.1
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:45 boinc_task_state.xml
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc      1021 Jun  3 20:46 memory_monitor_summary.json
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc   1603667 Jun  3 20:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc    394475 Jun  3 20:46 log.45006595._022581.job.log.tgz.1
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc        95 Jun  3 20:47 pilot_heartbeat.json
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc      7702 Jun  3 20:47 heartbeat.json
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc      4539 Jun  3 20:48 pilotlog.txt
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc   1159667 Jun  3 20:48 log.45006595._022581.job.log.1
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc       357 Jun  3 20:48 output.list
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:48 runtime_log
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc   1576960 Jun  3 20:48 result.tar.gz
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc       656 Jun  3 20:48 XJyKDmCUag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdTiKDmRJkndn.diag
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:48 runtime_log.err
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:12 boinc_mmap_file
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc        28 Jun  3 23:12 wrapper_checkpoint.txt
[2025-06-03 23:12:22] -rw-r--r--. 1 boinc boinc     20516 Jun  3 23:12 stderr.txt
[2025-06-03 23:12:22] HITS file was successfully produced:
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc 171994420 Jun  3 20:45 shared/HITS.pool.root.1
[2025-06-03 23:12:22]  *** Contents of shared directory: ***
[2025-06-03 23:12:22] total 381172
[2025-06-03 23:12:22] -rw-r--r--. 2 boinc boinc 216216173 Jun  3 17:04 ATLAS.root_0
[2025-06-03 23:12:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:04 start_atlas.sh
[2025-06-03 23:12:22] -rw-r--r--. 2 boinc boinc    508875 Jun  3 17:04 input.tar.gz
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc 171994420 Jun  3 20:45 HITS.pool.root.1
[2025-06-03 23:12:22] -rw-------. 1 boinc boinc   1576960 Jun  3 20:48 result.tar.gz
23:12:24 (23069): run_atlas exited; CPU time 48483.875414
23:12:24 (23069): called boinc_finish(0)

</stderr_txt>
]]>

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