Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:58:42 (2256368): wrapper (7.7.26015): starting
04:58:42 (2256368): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 04:58:42] Arguments: --nthreads 4
[2025-06-05 04:58:42] Threads: 4
[2025-06-05 04:58:42] Checking for CVMFS
[2025-06-05 04:58:42] No cvmfs_config command found, will try listing directly
[2025-06-05 04:58:42] CVMFS is ok
[2025-06-05 04:58:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:58:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:58:42] Further information can be found at the LHC@home message board.
[2025-06-05 04:58:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:58:42] Checking for apptainer binary...
[2025-06-05 04:58:42] which: no apptainer in ((null))
[2025-06-05 04:58:42] apptainer is not installed, using version from CVMFS
[2025-06-05 04:58:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:58:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-06-05 04:58:42] apptainer works
[2025-06-05 04:58:42] Set ATHENA_PROC_NUMBER=4
[2025-06-05 04:58:42] Set ATHENA_CORE_NUMBER=4
[2025-06-05 04:58:42] Starting ATLAS job with PandaID=6677473562
[2025-06-05 04:58:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:49:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:49:29] 2025-06-05 05:44:46,322 | INFO     | executing command: lscpu
[2025-06-05 07:49:29] 2025-06-05 05:44:46,388 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 07:49:29] 2025-06-05 05:44:48,091 | INFO     | monitor loop #723: job 0:6677473562 is in state 'finished'
[2025-06-05 07:49:29] 2025-06-05 05:44:48,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:49:29] 2025-06-05 05:44:50,594 | INFO     | monitor loop #724: job 0:6677473562 is in state 'finished'
[2025-06-05 07:49:29] 2025-06-05 05:44:50,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,225 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 07:49:29] 2025-06-05 05:44:51,225 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677473562/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,226 | INFO     | extracted standard info from prmon json
[2025-06-05 07:49:29] 2025-06-05 05:44:51,227 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:49:29] 2025-06-05 05:44:51,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:49:29] 2025-06-05 05:44:51,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:49:29] 2025-06-05 05:44:51,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:49:29] 2025-06-05 05:44:51,231 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:49:29] 2025-06-05 05:44:51,231 | INFO     | sum of square deviations: 1342841922.0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,232 | INFO     | sum of deviations: 21786268767.0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,232 | INFO     | mean x: 1749097304.0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,233 | INFO     | mean y: 2314368.8527607364
[2025-06-05 07:49:29] 2025-06-05 05:44:51,233 | INFO     | -- intersect: -28375042146.6665
[2025-06-05 07:49:29] 2025-06-05 05:44:51,233 | INFO     | intersect: -28375042146.6665
[2025-06-05 07:49:29] 2025-06-05 05:44:51,233 | INFO     | chi2: 1.6510357123763861
[2025-06-05 07:49:29] 2025-06-05 05:44:51,233 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 07:49:29] 2025-06-05 05:44:51,235 | INFO     | sum of deviations: 21061584710.500004
[2025-06-05 07:49:29] 2025-06-05 05:44:51,235 | INFO     | mean x: 1749097151.5
[2025-06-05 07:49:29] 2025-06-05 05:44:51,235 | INFO     | mean y: 2313446.3227848103
[2025-06-05 07:49:29] 2025-06-05 05:44:51,235 | INFO     | -- intersect: -30118915701.42008
[2025-06-05 07:49:29] 2025-06-05 05:44:51,235 | INFO     | intersect: -30118915701.42008
[2025-06-05 07:49:29] 2025-06-05 05:44:51,236 | INFO     | chi2: 1.652794832816971
[2025-06-05 07:49:29] 2025-06-05 05:44:51,236 | INFO     | current chi2=1.652794832816971 (change=-0.1065464803334235 %)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,236 | INFO     | right removable region: 157
[2025-06-05 07:49:29] 2025-06-05 05:44:51,236 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 07:49:29] 2025-06-05 05:44:51,237 | INFO     | sum of deviations: -4260254030.000001
[2025-06-05 07:49:29] 2025-06-05 05:44:51,237 | INFO     | mean x: 1749097456.5
[2025-06-05 07:49:29] 2025-06-05 05:44:51,237 | INFO     | mean y: 2347122.911392405
[2025-06-05 07:49:29] 2025-06-05 05:44:51,238 | INFO     | -- intersect: 6095151249.746647
[2025-06-05 07:49:29] 2025-06-05 05:44:51,238 | INFO     | intersect: 6095151249.746647
[2025-06-05 07:49:29] 2025-06-05 05:44:51,238 | INFO     | chi2: 0.030682621104583144
[2025-06-05 07:49:29] 2025-06-05 05:44:51,238 | INFO     | current chi2=0.030682621104583144 (change=98.1416137231568 %)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,238 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,239 | INFO     | sum of deviations: -4019798496.0000005
[2025-06-05 07:49:29] 2025-06-05 05:44:51,239 | INFO     | mean x: 1749097609.0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,240 | INFO     | mean y: 2346761.575163399
[2025-06-05 07:49:29] 2025-06-05 05:44:51,240 | INFO     | -- intersect: 6333519543.989177
[2025-06-05 07:49:29] 2025-06-05 05:44:51,240 | INFO     | intersect: 6333519543.989177
[2025-06-05 07:49:29] 2025-06-05 05:44:51,240 | INFO     | chi2: 0.026663995609758392
[2025-06-05 07:49:29] 2025-06-05 05:44:51,240 | INFO     | current chi2=0.026663995609758392 (change=13.097399603270787 %)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,240 | INFO     | left removable region: 20
[2025-06-05 07:49:29] 2025-06-05 05:44:51,240 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,241 | INFO     | sum of deviations: 903293002.0000002
[2025-06-05 07:49:29] 2025-06-05 05:44:51,241 | INFO     | mean x: 1749097731.0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,241 | INFO     | mean y: 2339010.598540146
[2025-06-05 07:49:29] 2025-06-05 05:44:51,242 | INFO     | -- intersect: -1979305443.4482803
[2025-06-05 07:49:29] 2025-06-05 05:44:51,242 | INFO     | intersect: -1979305443.4482803
[2025-06-05 07:49:29] 2025-06-05 05:44:51,242 | INFO     | chi2: 0.006653678829141612
[2025-06-05 07:49:29] 2025-06-05 05:44:51,242 | INFO     | -- intersect: -1979305443.4482803
[2025-06-05 07:49:29] 2025-06-05 05:44:51,242 | INFO     | current memory leak: 1.13 B/s (using 137 data points, chi2=0.01)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,243 | INFO     | ..............................
[2025-06-05 07:49:29] 2025-06-05 05:44:51,243 | INFO     | . Timing measurements:
[2025-06-05 07:49:29] 2025-06-05 05:44:51,243 | INFO     | . get job = 0 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,243 | INFO     | . initial setup = 1 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,243 | INFO     | . payload setup = 8 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,243 | INFO     | . stage-in = 0 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,243 | INFO     | . payload execution = 9921 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,244 | INFO     | . stage-out = 0 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,244 | INFO     | . log creation = 0 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,244 | INFO     | ..............................
[2025-06-05 07:49:29] 2025-06-05 05:44:51,346 | INFO     | 
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | job summary report
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | --------------------------------------------------
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | PanDA job id: 6677473562
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | task id: 45006595
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | errors: (none)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | pilot state: finished 
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | transexitcode: 0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | exeerrorcode: 0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | exeerrordiag: 
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | exitcode: 0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,347 | INFO     | exitmsg: OK
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | cpuconsumptiontime: 37860 s
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | nevents: 400
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | neventsw: 0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | pid: 2267046
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | pgrp: 2267046
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | corecount: 4
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | event service: False
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | sizes: {0: 2397073, 1: 2397328, 6: 2397534, 12: 2397562, 9933: 2426022, 9935: 2435169, 9942: 2435283}
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | --------------------------------------------------
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | 
[2025-06-05 07:49:29] 2025-06-05 05:44:51,348 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-05 07:49:29] 2025-06-05 05:44:51,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,373 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:49:29] 2025-06-05 05:44:51,375 | INFO     | job 6677473562 has completed (purged errors)
[2025-06-05 07:49:29] 2025-06-05 05:44:51,375 | INFO     | overall cleanup function is called
[2025-06-05 07:49:29] 2025-06-05 05:44:52,384 | INFO     | --- collectZombieJob: --- 10, [2267046]
[2025-06-05 07:49:29] 2025-06-05 05:44:52,384 | INFO     | zombie collector waiting for pid 2267046
[2025-06-05 07:49:29] 2025-06-05 05:44:52,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:49:29] 2025-06-05 05:44:52,384 | INFO     | collected zombie processes
[2025-06-05 07:49:29] 2025-06-05 05:44:52,384 | INFO     | will attempt to kill all subprocesses of pid=2267046
[2025-06-05 07:49:29] 2025-06-05 05:44:52,770 | INFO     | process IDs to be killed: [2267046] (in reverse order)
[2025-06-05 07:49:29] 2025-06-05 05:44:52,890 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:49:29] 2025-06-05 05:44:52,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:49:29] 2025-06-05 05:44:52,903 | INFO     | did not find any defunct processes belonging to 2267046
[2025-06-05 07:49:29] 2025-06-05 05:44:52,916 | INFO     | did not find any defunct processes belonging to 2267046
[2025-06-05 07:49:29] 2025-06-05 05:44:52,916 | INFO     | ready for new job
[2025-06-05 07:49:29] 2025-06-05 05:44:52,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:49:29] 2025-06-05 05:44:52,918 | INFO     | **************************************
[2025-06-05 07:49:29] 2025-06-05 05:44:52,919 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:49:29] 2025-06-05 05:44:52,920 | INFO     | **************************************
[2025-06-05 07:49:29] 2025-06-05 05:44:52,920 | INFO     | 
[2025-06-05 07:49:29] 2025-06-05 05:44:52,924 | INFO     | architecture information:
[2025-06-05 07:49:29] 2025-06-05 05:44:52,924 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:49:29] 2025-06-05 05:44:52,941 | INFO     | cat /etc/os-release:
[2025-06-05 07:49:29] NAME="CentOS Linux"
[2025-06-05 07:49:29] VERSION="7 (Core)"
[2025-06-05 07:49:29] ID="centos"
[2025-06-05 07:49:29] ID_LIKE="rhel fedora"
[2025-06-05 07:49:29] VERSION_ID="7"
[2025-06-05 07:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:49:29] ANSI_COLOR="0;31"
[2025-06-05 07:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:49:29] HOME_URL="https://www.centos.org/"
[2025-06-05 07:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:49:29] 
[2025-06-05 07:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:49:29] 
[2025-06-05 07:49:29] 2025-06-05 05:44:52,941 | INFO     | **************************************
[2025-06-05 07:49:29] 2025-06-05 05:44:53,444 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-05 07:49:29] 2025-06-05 05:44:53,462 | INFO     | sufficient remaining disk space (660861878272 B)
[2025-06-05 07:49:29] 2025-06-05 05:44:53,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:49:29] 2025-06-05 05:44:53,463 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:49:29] 2025-06-05 05:44:53,463 | INFO     | update_server=False
[2025-06-05 07:49:29] 2025-06-05 05:44:53,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:49:29] 2025-06-05 05:44:53,463 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 07:49:29] 2025-06-05 05:44:53,464 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:49:29] 2025-06-05 05:44:53,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:49:29] 2025-06-05 05:44:53,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:49:29] 2025-06-05 05:44:53,756 | INFO     | all payload control threads have been joined
[2025-06-05 07:49:29] 2025-06-05 05:44:53,767 | INFO     | all job control threads have been joined
[2025-06-05 07:49:29] 2025-06-05 05:44:54,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:49:29] 2025-06-05 05:44:54,102 | INFO     | aborting loop
[2025-06-05 07:49:29] 2025-06-05 05:44:54,466 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:54,555 | INFO     | all data control threads have been joined
[2025-06-05 07:49:29] 2025-06-05 05:44:54,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:49:29] 2025-06-05 05:44:54,741 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:54,761 | INFO     | [payload] control thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:54,773 | INFO     | [job] control thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:54,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:49:29] 2025-06-05 05:44:54,920 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:55,106 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:55,246 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:55,560 | INFO     | [data] control thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:55,631 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:55,688 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:55,848 | INFO     | [job] validate thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:55,912 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:56,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:49:29] 2025-06-05 05:44:56,737 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:57,362 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:44:58,841 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:45:04,263 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:49:29] 2025-06-05 05:45:05,268 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:49:29] 2025-06-05 05:45:05,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22576778966848)>', '<ExcThread(monitor, started 22576539596544)>']
[2025-06-05 07:49:29] 2025-06-05 05:45:05,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:49:29] 2025-06-05 05:45:05,521 | INFO     | [monitor] control thread has ended
[2025-06-05 07:49:29] 2025-06-05 05:45:10,337 | INFO     | all workflow threads have been joined
[2025-06-05 07:49:29] 2025-06-05 05:45:10,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:49:29] 2025-06-05 05:45:10,337 | INFO     | traces error code: 0
[2025-06-05 07:49:29] 2025-06-05 05:45:10,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:49:29] 2025-06-05 05:45:10,557 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:49:29] 2025-06-05 05:45:10,560 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:49:29] 2025-06-05 05:45:10,563 [wrapper] pilotpid: 2260033
[2025-06-05 07:49:29] 2025-06-05 05:45:10,566 [wrapper] Pilot exit status: 0
[2025-06-05 07:49:29] 2025-06-05 05:45:10,577 [wrapper] pandaids: 6677473562
[2025-06-05 07:49:29] 2025-06-05 05:45:10,651 [wrapper] cleanup supervisor_pilot 2596812 2260034
[2025-06-05 07:49:29] 2025-06-05 05:45:10,654 [wrapper] Test setup, not cleaning
[2025-06-05 07:49:29] 2025-06-05 05:45:10,657 [wrapper] apfmon messages muted
[2025-06-05 07:49:29] 2025-06-05 05:45:10,660 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:49:29] 2025-06-05 05:45:10,663 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:49:29]  *** Error codes and diagnostics ***
[2025-06-05 07:49:29]     "exeErrorCode": 0,
[2025-06-05 07:49:29]     "exeErrorDiag": "",
[2025-06-05 07:49:29]     "pilotErrorCode": 0,
[2025-06-05 07:49:29]     "pilotErrorDiag": "",
[2025-06-05 07:49:29]  *** Listing of results directory ***
[2025-06-05 07:49:29] total 390244
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc    495897 Jun  3 08:16 pilot3.tar.gz
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc      5111 Jun  3 08:20 queuedata.json
[2025-06-05 07:49:29] -rwx------ 1 boinc boinc     37140 Jun  3 08:21 runpilot2-wrapper.sh
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc       100 Jun  5 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:49:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:58 run_atlas
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc       105 Jun  5 04:58 job.xml
[2025-06-05 07:49:29] -rw-r--r-- 2 boinc boinc 214288053 Jun  5 04:58 EVNT.45006593._000886.pool.root.1
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc      6635 Jun  5 04:58 init_data.xml
[2025-06-05 07:49:29] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:58 start_atlas.sh
[2025-06-05 07:49:29] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:58 shared
[2025-06-05 07:49:29] -rw-r--r-- 2 boinc boinc    508876 Jun  5 04:58 input.tar.gz
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc         0 Jun  5 04:58 boinc_lockfile
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc      2523 Jun  5 04:58 pandaJob.out
[2025-06-05 07:49:29] -rw------- 1 boinc boinc    987109 Jun  5 04:58 agis_schedconf.cvmfs.json
[2025-06-05 07:49:29] -rw------- 1 boinc boinc   1598969 Jun  5 04:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:49:29] drwx------ 4 boinc boinc      4096 Jun  5 04:58 pilot3
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc       528 Jun  5 07:44 boinc_task_state.xml
[2025-06-05 07:49:29] -rw------- 1 boinc boinc 179006291 Jun  5 07:44 HITS.45006595._022150.pool.root.1
[2025-06-05 07:49:29] -rw------- 1 boinc boinc        95 Jun  5 07:44 pilot_heartbeat.json
[2025-06-05 07:49:29] -rw------- 1 boinc boinc      1034 Jun  5 07:44 memory_monitor_summary.json
[2025-06-05 07:49:29] -rw------- 1 boinc boinc    305554 Jun  5 07:44 log.45006595._022150.job.log.tgz.1
[2025-06-05 07:49:29] -rw------- 1 boinc boinc      7716 Jun  5 07:44 heartbeat.json
[2025-06-05 07:49:29] -rw------- 1 boinc boinc      4558 Jun  5 07:45 pilotlog.txt
[2025-06-05 07:49:29] -rw------- 1 boinc boinc    934586 Jun  5 07:45 log.45006595._022150.job.log.1
[2025-06-05 07:49:29] -rw------- 1 boinc boinc       357 Jun  5 07:45 output.list
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc       620 Jun  5 07:45 runtime_log
[2025-06-05 07:49:29] -rw------- 1 boinc boinc   1259520 Jun  5 07:45 result.tar.gz
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc      9025 Jun  5 07:45 runtime_log.err
[2025-06-05 07:49:29] -rw------- 1 boinc boinc       662 Jun  5 07:45 7zkKDmFDag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdaXKDmFPA6wn.diag
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc        26 Jun  5 07:49 wrapper_checkpoint.txt
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc      8192 Jun  5 07:49 boinc_mmap_file
[2025-06-05 07:49:29] -rw-r--r-- 1 boinc boinc     20911 Jun  5 07:49 stderr.txt
[2025-06-05 07:49:29] HITS file was successfully produced:
[2025-06-05 07:49:29] -rw------- 1 boinc boinc 179006291 Jun  5 07:44 shared/HITS.pool.root.1
[2025-06-05 07:49:29]  *** Contents of shared directory: ***
[2025-06-05 07:49:29] total 385836
[2025-06-05 07:49:29] -rw-r--r-- 2 boinc boinc 214288053 Jun  5 04:58 ATLAS.root_0
[2025-06-05 07:49:29] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:58 start_atlas.sh
[2025-06-05 07:49:29] -rw-r--r-- 2 boinc boinc    508876 Jun  5 04:58 input.tar.gz
[2025-06-05 07:49:29] -rw------- 1 boinc boinc 179006291 Jun  5 07:44 HITS.pool.root.1
[2025-06-05 07:49:29] -rw------- 1 boinc boinc   1259520 Jun  5 07:45 result.tar.gz
07:49:31 (2256368): run_atlas exited; CPU time 38272.384799
07:49:31 (2256368): called boinc_finish(0)

</stderr_txt>
]]>

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