Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:08:56 (2177): wrapper (7.7.26015): starting
17:08:56 (2177): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:08:56] Arguments: --nthreads 8
[2025-06-03 17:08:56] Threads: 8
[2025-06-03 17:08:56] Checking for CVMFS
[2025-06-03 17:08:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:08:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:08:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:08:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:08:57] 2.11.2.0 5632 31923 97988 146743 1 306 18490320 25165825 3830 130560 0 16112694 99.784 19106320 2106 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:08:57] CVMFS is ok
[2025-06-03 17:08:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:08:57] Checking for apptainer binary...
[2025-06-03 17:08:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:08:57] Running /usr/bin/apptainer --version
[2025-06-03 17:08:57] apptainer version 1.3.2-1.el7
[2025-06-03 17:08:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:08:58] cg-vwn252.simple-grid.lan
[2025-06-03 17:08:58] apptainer works
[2025-06-03 17:08:58] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:08:58] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:08:58] Starting ATLAS job with PandaID=6677473701
[2025-06-03 17:08:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:47:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:47:31] 2025-06-03 18:47:13,900 | INFO     | mean x: 1748970035.5
[2025-06-03 20:47:31] 2025-06-03 18:47:13,900 | INFO     | mean y: 2486487.158653846
[2025-06-03 20:47:31] 2025-06-03 18:47:13,900 | INFO     | -- intersect: -4025441846.4018817
[2025-06-03 20:47:31] 2025-06-03 18:47:13,900 | INFO     | intersect: -4025441846.4018817
[2025-06-03 20:47:31] 2025-06-03 18:47:13,901 | INFO     | chi2: 0.01478728420275523
[2025-06-03 20:47:31] 2025-06-03 18:47:13,901 | INFO     | current chi2=0.01478728420275523 (change=98.98835014369723 %)
[2025-06-03 20:47:31] 2025-06-03 18:47:13,901 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,903 | INFO     | sum of deviations: 6966609676.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,903 | INFO     | mean x: 1748970188.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,904 | INFO     | mean y: 2486076.6551724137
[2025-06-03 20:47:31] 2025-06-03 18:47:13,904 | INFO     | -- intersect: -4694809475.252503
[2025-06-03 20:47:31] 2025-06-03 18:47:13,904 | INFO     | intersect: -4694809475.252503
[2025-06-03 20:47:31] 2025-06-03 18:47:13,904 | INFO     | chi2: 0.002646569905557156
[2025-06-03 20:47:31] 2025-06-03 18:47:13,904 | INFO     | current chi2=0.002646569905557156 (change=82.10239372376414 %)
[2025-06-03 20:47:31] 2025-06-03 18:47:13,905 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 20:47:31] 2025-06-03 18:47:13,906 | INFO     | sum of deviations: 5258086997.5
[2025-06-03 20:47:31] 2025-06-03 18:47:13,906 | INFO     | mean x: 1748970340.5
[2025-06-03 20:47:31] 2025-06-03 18:47:13,907 | INFO     | mean y: 2487468.51010101
[2025-06-03 20:47:31] 2025-06-03 18:47:13,907 | INFO     | -- intersect: -3818250861.5322933
[2025-06-03 20:47:31] 2025-06-03 18:47:13,907 | INFO     | intersect: -3818250861.5322933
[2025-06-03 20:47:31] 2025-06-03 18:47:13,907 | INFO     | chi2: 0.0012570647706054289
[2025-06-03 20:47:31] 2025-06-03 18:47:13,907 | INFO     | current chi2=0.0012570647706054289 (change=52.502113472767256 %)
[2025-06-03 20:47:31] 2025-06-03 18:47:13,908 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,909 | INFO     | sum of deviations: 4140354687.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,909 | INFO     | mean x: 1748970493.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,909 | INFO     | mean y: 2488425.041450777
[2025-06-03 20:47:31] 2025-06-03 18:47:13,910 | INFO     | -- intersect: -3246000106.2147837
[2025-06-03 20:47:31] 2025-06-03 18:47:13,910 | INFO     | intersect: -3246000106.2147837
[2025-06-03 20:47:31] 2025-06-03 18:47:13,910 | INFO     | chi2: 0.0006972393789329256
[2025-06-03 20:47:31] 2025-06-03 18:47:13,910 | INFO     | current chi2=0.0006972393789329256 (change=44.53433146510657 %)
[2025-06-03 20:47:31] 2025-06-03 18:47:13,911 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,912 | INFO     | sum of deviations: 3418987200.4999995
[2025-06-03 20:47:31] 2025-06-03 18:47:13,912 | INFO     | mean x: 1748970645.5
[2025-06-03 20:47:31] 2025-06-03 18:47:13,912 | INFO     | mean y: 2489075.60106383
[2025-06-03 20:47:31] 2025-06-03 18:47:13,912 | INFO     | -- intersect: -2899797622.7819524
[2025-06-03 20:47:31] 2025-06-03 18:47:13,913 | INFO     | intersect: -2899797622.7819524
[2025-06-03 20:47:31] 2025-06-03 18:47:13,913 | INFO     | chi2: 0.0005136896361860664
[2025-06-03 20:47:31] 2025-06-03 18:47:13,913 | INFO     | current chi2=0.0005136896361860664 (change=26.325211726820253 %)
[2025-06-03 20:47:31] 2025-06-03 18:47:13,913 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,915 | INFO     | sum of deviations: 2847407898.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,915 | INFO     | mean x: 1748970798.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,915 | INFO     | mean y: 2489620.098360656
[2025-06-03 20:47:31] 2025-06-03 18:47:13,915 | INFO     | -- intersect: -2618187510.8596835
[2025-06-03 20:47:31] 2025-06-03 18:47:13,915 | INFO     | intersect: -2618187510.8596835
[2025-06-03 20:47:31] 2025-06-03 18:47:13,916 | INFO     | chi2: 0.00041049322892696707
[2025-06-03 20:47:31] 2025-06-03 18:47:13,916 | INFO     | current chi2=0.00041049322892696707 (change=20.089252340243824 %)
[2025-06-03 20:47:31] 2025-06-03 18:47:13,916 | INFO     | left removable region: 60
[2025-06-03 20:47:31] 2025-06-03 18:47:13,916 | INFO     | sum of square deviations: 984941258.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,917 | INFO     | sum of deviations: 813132561.9999994
[2025-06-03 20:47:31] 2025-06-03 18:47:13,917 | INFO     | mean x: 1748971530.0
[2025-06-03 20:47:31] 2025-06-03 18:47:13,917 | INFO     | mean y: 2491535.7346938774
[2025-06-03 20:47:31] 2025-06-03 18:47:13,918 | INFO     | -- intersect: -1441397314.9991424
[2025-06-03 20:47:31] 2025-06-03 18:47:13,918 | INFO     | intersect: -1441397314.9991424
[2025-06-03 20:47:31] 2025-06-03 18:47:13,918 | INFO     | chi2: 7.566499507793932e-05
[2025-06-03 20:47:31] 2025-06-03 18:47:13,918 | INFO     | -- intersect: -1441397314.9991424
[2025-06-03 20:47:31] 2025-06-03 18:47:13,918 | INFO     | current memory leak: 0.83 B/s (using 147 data points, chi2=0.00)
[2025-06-03 20:47:31] 2025-06-03 18:47:13,919 | INFO     | ..............................
[2025-06-03 20:47:31] 2025-06-03 18:47:13,919 | INFO     | . Timing measurements:
[2025-06-03 20:47:31] 2025-06-03 18:47:13,919 | INFO     | . get job = 0 s
[2025-06-03 20:47:31] 2025-06-03 18:47:13,920 | INFO     | . initial setup = 2 s
[2025-06-03 20:47:31] 2025-06-03 18:47:13,920 | INFO     | . payload setup = 14 s
[2025-06-03 20:47:31] 2025-06-03 18:47:13,920 | INFO     | . stage-in = 0 s
[2025-06-03 20:47:31] 2025-06-03 18:47:13,920 | INFO     | . payload execution = 13010 s
[2025-06-03 20:47:31] 2025-06-03 18:47:13,920 | INFO     | . stage-out = 1 s
[2025-06-03 20:47:31] 2025-06-03 18:47:13,920 | INFO     | . log creation = 0 s
[2025-06-03 20:47:31] 2025-06-03 18:47:13,920 | INFO     | ..............................
[2025-06-03 20:47:31] 2025-06-03 18:47:14,051 | INFO     | 
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | job summary report
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | --------------------------------------------------
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | PanDA job id: 6677473701
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | task id: 45006595
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | errors: (none)
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | pilot state: finished 
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | transexitcode: 0
[2025-06-03 20:47:31] 2025-06-03 18:47:14,052 | INFO     | exeerrorcode: 0
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | exeerrordiag: 
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | exitcode: 0
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | exitmsg: OK
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | cpuconsumptiontime: 47969 s
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | nevents: 400
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | neventsw: 0
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | pid: 14465
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | pgrp: 14465
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | corecount: 8
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | event service: False
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | sizes: {0: 2405012, 1: 2405211, 2: 2405211, 9: 2405445, 12: 2405473, 13029: 2435232, 13031: 2444175, 13033: 2444231, 13054: 2444401}
[2025-06-03 20:47:31] 2025-06-03 18:47:14,053 | INFO     | --------------------------------------------------
[2025-06-03 20:47:31] 2025-06-03 18:47:14,054 | INFO     | 
[2025-06-03 20:47:31] 2025-06-03 18:47:14,054 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-03 20:47:31] 2025-06-03 18:47:14,101 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,102 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,102 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,102 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:47:31] 2025-06-03 18:47:14,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:47:31] 2025-06-03 18:47:14,104 | INFO     | job 6677473701 has completed (purged errors)
[2025-06-03 20:47:31] 2025-06-03 18:47:14,104 | INFO     | overall cleanup function is called
[2025-06-03 20:47:31] 2025-06-03 18:47:15,113 | INFO     | --- collectZombieJob: --- 10, [14465]
[2025-06-03 20:47:31] 2025-06-03 18:47:15,114 | INFO     | zombie collector waiting for pid 14465
[2025-06-03 20:47:31] 2025-06-03 18:47:15,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:47:31] 2025-06-03 18:47:15,114 | INFO     | collected zombie processes
[2025-06-03 20:47:31] 2025-06-03 18:47:15,114 | INFO     | will attempt to kill all subprocesses of pid=14465
[2025-06-03 20:47:31] 2025-06-03 18:47:15,228 | INFO     | process IDs to be killed: [14465] (in reverse order)
[2025-06-03 20:47:31] 2025-06-03 18:47:15,311 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:47:31] 2025-06-03 18:47:15,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:47:31] 2025-06-03 18:47:15,315 | INFO     | did not find any defunct processes belonging to 14465
[2025-06-03 20:47:31] 2025-06-03 18:47:15,320 | INFO     | did not find any defunct processes belonging to 14465
[2025-06-03 20:47:31] 2025-06-03 18:47:15,321 | INFO     | ready for new job
[2025-06-03 20:47:31] 2025-06-03 18:47:15,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:47:31] 2025-06-03 18:47:15,323 | INFO     | **************************************
[2025-06-03 20:47:31] 2025-06-03 18:47:15,323 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:47:31] 2025-06-03 18:47:15,323 | INFO     | **************************************
[2025-06-03 20:47:31] 2025-06-03 18:47:15,323 | INFO     | 
[2025-06-03 20:47:31] 2025-06-03 18:47:15,324 | INFO     | pilot is running in a VM
[2025-06-03 20:47:31] 2025-06-03 18:47:15,324 | INFO     | architecture information:
[2025-06-03 20:47:31] 2025-06-03 18:47:15,324 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:47:31] 2025-06-03 18:47:15,370 | INFO     | cat /etc/os-release:
[2025-06-03 20:47:31] NAME="CentOS Linux"
[2025-06-03 20:47:31] VERSION="7 (Core)"
[2025-06-03 20:47:31] ID="centos"
[2025-06-03 20:47:31] ID_LIKE="rhel fedora"
[2025-06-03 20:47:31] VERSION_ID="7"
[2025-06-03 20:47:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:47:31] ANSI_COLOR="0;31"
[2025-06-03 20:47:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:47:31] HOME_URL="https://www.centos.org/"
[2025-06-03 20:47:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:47:31] 
[2025-06-03 20:47:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:47:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:47:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:47:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:47:31] 
[2025-06-03 20:47:31] 2025-06-03 18:47:15,370 | INFO     | **************************************
[2025-06-03 20:47:31] 2025-06-03 18:47:15,873 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-03 20:47:31] 2025-06-03 18:47:15,909 | INFO     | sufficient remaining disk space (497432920064 B)
[2025-06-03 20:47:31] 2025-06-03 18:47:15,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:47:31] 2025-06-03 18:47:15,910 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:47:31] 2025-06-03 18:47:15,910 | INFO     | update_server=False
[2025-06-03 20:47:31] 2025-06-03 18:47:15,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:47:31] 2025-06-03 18:47:15,910 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:47:31] 2025-06-03 18:47:15,911 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:47:31] 2025-06-03 18:47:15,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:47:31] 2025-06-03 18:47:15,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:47:31] 2025-06-03 18:47:15,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:47:31] 2025-06-03 18:47:15,931 | INFO     | all data control threads have been joined
[2025-06-03 20:47:31] 2025-06-03 18:47:16,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:47:31] 2025-06-03 18:47:16,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:47:31] 2025-06-03 18:47:16,883 | INFO     | aborting loop
[2025-06-03 20:47:31] 2025-06-03 18:47:16,916 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:16,924 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:16,930 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:16,937 | INFO     | [data] control thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:16,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:17,060 | INFO     | all payload control threads have been joined
[2025-06-03 20:47:31] 2025-06-03 18:47:17,134 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:17,321 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:17,518 | INFO     | all job control threads have been joined
[2025-06-03 20:47:31] 2025-06-03 18:47:17,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:47:31] 2025-06-03 18:47:17,839 | INFO     | [job] validate thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:17,888 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:18,066 | INFO     | [payload] control thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:18,135 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:18,363 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:18,419 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:18,439 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:18,524 | INFO     | [job] control thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:21,603 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:47:31] 2025-06-03 18:47:23,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711923033920)>', '<ExcThread(monitor, started 140711466866432)>']
[2025-06-03 20:47:31] 2025-06-03 18:47:23,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:47:31] 2025-06-03 18:47:23,957 | INFO     | [monitor] control thread has ended
[2025-06-03 20:47:31] 2025-06-03 18:47:28,028 | INFO     | all workflow threads have been joined
[2025-06-03 20:47:31] 2025-06-03 18:47:28,029 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:47:31] 2025-06-03 18:47:28,029 | INFO     | traces error code: 0
[2025-06-03 20:47:31] 2025-06-03 18:47:28,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:47:31] 2025-06-03 18:47:28,392 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:47:31] 2025-06-03 18:47:28,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:47:31] 2025-06-03 18:47:28,632 [wrapper] pilotpid: 5933
[2025-06-03 20:47:31] 2025-06-03 18:47:28,639 [wrapper] Pilot exit status: 0
[2025-06-03 20:47:31] 2025-06-03 18:47:29,145 [wrapper] pandaids: 6677473701
[2025-06-03 20:47:31] 2025-06-03 18:47:30,036 [wrapper] cleanup supervisor_pilot 21837 5934
[2025-06-03 20:47:31] 2025-06-03 18:47:30,143 [wrapper] Test setup, not cleaning
[2025-06-03 20:47:31] 2025-06-03 18:47:30,271 [wrapper] apfmon messages muted
[2025-06-03 20:47:31] 2025-06-03 18:47:30,442 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:47:31] 2025-06-03 18:47:30,525 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:47:31]  *** Error codes and diagnostics ***
[2025-06-03 20:47:31]     "exeErrorCode": 0,
[2025-06-03 20:47:31]     "exeErrorDiag": "",
[2025-06-03 20:47:31]     "pilotErrorCode": 0,
[2025-06-03 20:47:31]     "pilotErrorDiag": "",
[2025-06-03 20:47:31]  *** Listing of results directory ***
[2025-06-03 20:47:31] total 387148
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:25 pilot3.tar.gz
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:25 queuedata.json
[2025-06-03 20:47:31] -rwx------. 1 boinc boinc     37140 Jun  3 08:26 runpilot2-wrapper.sh
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:47:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:08 run_atlas
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:08 job.xml
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc      6391 Jun  3 17:08 init_data.xml
[2025-06-03 20:47:31] -rw-r--r--. 2 boinc boinc 215256619 Jun  3 17:08 EVNT.45006593._000890.pool.root.1
[2025-06-03 20:47:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:08 start_atlas.sh
[2025-06-03 20:47:31] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:08 shared
[2025-06-03 20:47:31] -rw-r--r--. 2 boinc boinc    508881 Jun  3 17:08 input.tar.gz
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:08 boinc_lockfile
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:08 pandaJob.out
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc    982724 Jun  3 17:09 agis_schedconf.cvmfs.json
[2025-06-03 20:47:31] drwx------. 4 boinc boinc      4096 Jun  3 17:09 pilot3
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc 174328868 Jun  3 20:46 HITS.45006595._022242.pool.root.1
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:46 boinc_task_state.xml
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc        95 Jun  3 20:46 pilot_heartbeat.json
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc      1018 Jun  3 20:46 memory_monitor_summary.json
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc   1603667 Jun  3 20:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc    377798 Jun  3 20:46 log.45006595._022242.job.log.tgz.1
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc      7695 Jun  3 20:47 heartbeat.json
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc      4540 Jun  3 20:47 pilotlog.txt
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:47 wrapper_checkpoint.txt
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:47 boinc_mmap_file
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc   1142779 Jun  3 20:47 log.45006595._022242.job.log.1
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc       357 Jun  3 20:47 output.list
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:47 runtime_log
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc   1536000 Jun  3 20:47 result.tar.gz
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc      8673 Jun  3 20:47 runtime_log.err
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc       656 Jun  3 20:47 mYMNDmSHag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmibXKDmANpesm.diag
[2025-06-03 20:47:31] -rw-r--r--. 1 boinc boinc     20504 Jun  3 20:47 stderr.txt
[2025-06-03 20:47:31] HITS file was successfully produced:
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc 174328868 Jun  3 20:46 shared/HITS.pool.root.1
[2025-06-03 20:47:31]  *** Contents of shared directory: ***
[2025-06-03 20:47:31] total 382472
[2025-06-03 20:47:31] -rw-r--r--. 2 boinc boinc 215256619 Jun  3 17:08 ATLAS.root_0
[2025-06-03 20:47:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:08 start_atlas.sh
[2025-06-03 20:47:31] -rw-r--r--. 2 boinc boinc    508881 Jun  3 17:08 input.tar.gz
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc 174328868 Jun  3 20:46 HITS.pool.root.1
[2025-06-03 20:47:31] -rw-------. 1 boinc boinc   1536000 Jun  3 20:47 result.tar.gz
20:47:33 (2177): run_atlas exited; CPU time 48138.750190
20:47:33 (2177): called boinc_finish(0)

</stderr_txt>
]]>

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