Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:08:27 (5026): wrapper (7.7.26015): starting
20:08:27 (5026): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 20:08:27] Arguments: --nthreads 8
[2025-06-03 20:08:27] Threads: 8
[2025-06-03 20:08:27] Checking for CVMFS
[2025-06-03 20:08:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:08:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:08:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:08:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:08:28] 2.11.2.0 22417 32096 90292 146750 2 114 23784765 25165824 3354 130560 0 16257305 99.767 18996754 2182 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 20:08:28] CVMFS is ok
[2025-06-03 20:08:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:08:28] Checking for apptainer binary...
[2025-06-03 20:08:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:08:28] Running /usr/bin/apptainer --version
[2025-06-03 20:08:28] apptainer version 1.3.2-1.el7
[2025-06-03 20:08:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:08:30] cg-vwn254.simple-grid.lan
[2025-06-03 20:08:30] apptainer works
[2025-06-03 20:08:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 20:08:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 20:08:30] Starting ATLAS job with PandaID=6677473831
[2025-06-03 20:08:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:17:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:17:50] 2025-06-03 21:56:41,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:17:50] 2025-06-03 21:56:41,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:17:50] 2025-06-03 21:56:41,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:17:50] 2025-06-03 21:56:41,805 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:17:50] 2025-06-03 21:56:41,806 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 00:17:50] 2025-06-03 21:56:41,807 | INFO     | sum of deviations: -46139626550.50002
[2025-06-04 00:17:50] 2025-06-03 21:56:41,808 | INFO     | mean x: 1748980936.5
[2025-06-04 00:17:50] 2025-06-03 21:56:41,808 | INFO     | mean y: 2538410.6441441444
[2025-06-04 00:17:50] 2025-06-03 21:56:41,808 | INFO     | -- intersect: 23789042356.443863
[2025-06-04 00:17:50] 2025-06-03 21:56:41,808 | INFO     | intersect: 23789042356.443863
[2025-06-04 00:17:50] 2025-06-03 21:56:41,832 | INFO     | chi2: 2.76816748562067
[2025-06-04 00:17:50] 2025-06-03 21:56:41,833 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,834 | INFO     | sum of deviations: -29859756322.000004
[2025-06-04 00:17:50] 2025-06-03 21:56:41,834 | INFO     | mean x: 1748980784.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,835 | INFO     | mean y: 2549306.820276498
[2025-06-04 00:17:50] 2025-06-03 21:56:41,835 | INFO     | -- intersect: 16485042102.152918
[2025-06-04 00:17:50] 2025-06-03 21:56:41,835 | INFO     | intersect: 16485042102.152918
[2025-06-04 00:17:50] 2025-06-03 21:56:41,835 | INFO     | chi2: 2.006484992610668
[2025-06-04 00:17:50] 2025-06-03 21:56:41,835 | INFO     | current chi2=2.006484992610668 (change=27.51576618707448 %)
[2025-06-04 00:17:50] 2025-06-03 21:56:41,836 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,837 | INFO     | sum of deviations: -28499726704.500004
[2025-06-04 00:17:50] 2025-06-03 21:56:41,838 | INFO     | mean x: 1748980631.5
[2025-06-04 00:17:50] 2025-06-03 21:56:41,838 | INFO     | mean y: 2550276.1084905663
[2025-06-04 00:17:50] 2025-06-03 21:56:41,838 | INFO     | -- intersect: 16873881503.520988
[2025-06-04 00:17:50] 2025-06-03 21:56:41,838 | INFO     | intersect: 16873881503.520988
[2025-06-04 00:17:50] 2025-06-03 21:56:41,838 | INFO     | chi2: 2.004809771489698
[2025-06-04 00:17:50] 2025-06-03 21:56:41,838 | INFO     | current chi2=2.004809771489698 (change=0.08349033893296019 %)
[2025-06-04 00:17:50] 2025-06-03 21:56:41,839 | INFO     | right removable region: 211
[2025-06-04 00:17:50] 2025-06-03 21:56:41,839 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,841 | INFO     | sum of deviations: -86621732888.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,841 | INFO     | mean x: 1748981089.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,841 | INFO     | mean y: 2565733.3041474656
[2025-06-04 00:17:50] 2025-06-03 21:56:41,841 | INFO     | -- intersect: 47817501723.71669
[2025-06-04 00:17:50] 2025-06-03 21:56:41,841 | INFO     | intersect: 47817501723.71669
[2025-06-04 00:17:50] 2025-06-03 21:56:41,841 | INFO     | chi2: 1.0300877081249493
[2025-06-04 00:17:50] 2025-06-03 21:56:41,842 | INFO     | current chi2=1.0300877081249493 (change=62.78810030549917 %)
[2025-06-04 00:17:50] 2025-06-03 21:56:41,842 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,844 | INFO     | sum of deviations: -86211858912.49997
[2025-06-04 00:17:50] 2025-06-03 21:56:41,844 | INFO     | mean x: 1748981241.5
[2025-06-04 00:17:50] 2025-06-03 21:56:41,844 | INFO     | mean y: 2565402.6933962265
[2025-06-04 00:17:50] 2025-06-03 21:56:41,844 | INFO     | -- intersect: 51038470056.115814
[2025-06-04 00:17:50] 2025-06-03 21:56:41,845 | INFO     | intersect: 51038470056.115814
[2025-06-04 00:17:50] 2025-06-03 21:56:41,845 | INFO     | chi2: 1.003380003019296
[2025-06-04 00:17:50] 2025-06-03 21:56:41,845 | INFO     | current chi2=1.003380003019296 (change=2.592760295554716 %)
[2025-06-04 00:17:50] 2025-06-03 21:56:41,845 | INFO     | left removable region: 20
[2025-06-04 00:17:50] 2025-06-03 21:56:41,852 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,853 | INFO     | sum of deviations: -56819575450.00001
[2025-06-04 00:17:50] 2025-06-03 21:56:41,854 | INFO     | mean x: 1748981211.0
[2025-06-04 00:17:50] 2025-06-03 21:56:41,854 | INFO     | mean y: 2570699.9057591623
[2025-06-04 00:17:50] 2025-06-03 21:56:41,854 | INFO     | -- intersect: 45998193892.66573
[2025-06-04 00:17:50] 2025-06-03 21:56:41,854 | INFO     | intersect: 45998193892.66573
[2025-06-04 00:17:50] 2025-06-03 21:56:41,854 | INFO     | chi2: 0.20387029702171072
[2025-06-04 00:17:50] 2025-06-03 21:56:41,855 | INFO     | -- intersect: 45998193892.66573
[2025-06-04 00:17:50] 2025-06-03 21:56:41,855 | INFO     | current memory leak: -26.30 B/s (using 191 data points, chi2=0.20)
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | ..............................
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . Timing measurements:
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . get job = 0 s
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . initial setup = 2 s
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . payload setup = 17 s
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . stage-in = 0 s
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . payload execution = 13535 s
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . stage-out = 5 s
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | . log creation = 1 s
[2025-06-04 00:17:50] 2025-06-03 21:56:41,856 | INFO     | ..............................
[2025-06-04 00:17:50] 2025-06-03 21:56:42,014 | INFO     | 
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | job summary report
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | --------------------------------------------------
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | PanDA job id: 6677473831
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | task id: 45006595
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | errors: (none)
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | pilot state: finished 
[2025-06-04 00:17:50] 2025-06-03 21:56:42,015 | INFO     | transexitcode: 0
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | exeerrorcode: 0
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | exeerrordiag: 
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | exitcode: 0
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | exitmsg: OK
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | cpuconsumptiontime: 50830 s
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | nevents: 400
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | neventsw: 0
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | pid: 17216
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | pgrp: 17216
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | corecount: 8
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | event service: False
[2025-06-04 00:17:50] 2025-06-03 21:56:42,016 | INFO     | sizes: {0: 2405180, 1: 2405180, 11: 2405414, 12: 2405442, 13557: 2435039, 13563: 2444164, 13647: 2444278}
[2025-06-04 00:17:50] 2025-06-03 21:56:42,017 | INFO     | --------------------------------------------------
[2025-06-04 00:17:50] 2025-06-03 21:56:42,017 | INFO     | 
[2025-06-04 00:17:50] 2025-06-03 21:56:42,017 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 00:17:50] 2025-06-03 21:56:42,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:17:50] 2025-06-03 21:56:42,418 | INFO     | job 6677473831 has completed (purged errors)
[2025-06-04 00:17:50] 2025-06-03 21:56:42,419 | INFO     | overall cleanup function is called
[2025-06-04 00:17:50] 2025-06-03 21:56:43,428 | INFO     | --- collectZombieJob: --- 10, [17216]
[2025-06-04 00:17:50] 2025-06-03 21:56:43,428 | INFO     | zombie collector waiting for pid 17216
[2025-06-04 00:17:50] 2025-06-03 21:56:43,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:17:50] 2025-06-03 21:56:43,428 | INFO     | collected zombie processes
[2025-06-04 00:17:50] 2025-06-03 21:56:43,428 | INFO     | will attempt to kill all subprocesses of pid=17216
[2025-06-04 00:17:50] 2025-06-03 21:56:43,538 | INFO     | process IDs to be killed: [17216] (in reverse order)
[2025-06-04 00:17:50] 2025-06-03 21:56:44,217 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:17:50] 2025-06-03 21:56:44,218 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:17:50] 2025-06-03 21:56:44,221 | INFO     | did not find any defunct processes belonging to 17216
[2025-06-04 00:17:50] 2025-06-03 21:56:44,225 | INFO     | did not find any defunct processes belonging to 17216
[2025-06-04 00:17:50] 2025-06-03 21:56:44,225 | INFO     | ready for new job
[2025-06-04 00:17:50] 2025-06-03 21:56:44,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:17:50] 2025-06-03 21:56:44,227 | INFO     | **************************************
[2025-06-04 00:17:50] 2025-06-03 21:56:44,228 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:17:50] 2025-06-03 21:56:44,228 | INFO     | **************************************
[2025-06-04 00:17:50] 2025-06-03 21:56:44,228 | INFO     | 
[2025-06-04 00:17:50] 2025-06-03 21:56:44,228 | INFO     | pilot is running in a VM
[2025-06-04 00:17:50] 2025-06-03 21:56:44,229 | INFO     | architecture information:
[2025-06-04 00:17:50] 2025-06-03 21:56:44,237 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:17:50] 2025-06-03 21:56:44,452 | INFO     | cat /etc/os-release:
[2025-06-04 00:17:50] NAME="CentOS Linux"
[2025-06-04 00:17:50] VERSION="7 (Core)"
[2025-06-04 00:17:50] ID="centos"
[2025-06-04 00:17:50] ID_LIKE="rhel fedora"
[2025-06-04 00:17:50] VERSION_ID="7"
[2025-06-04 00:17:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:17:50] ANSI_COLOR="0;31"
[2025-06-04 00:17:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:17:50] HOME_URL="https://www.centos.org/"
[2025-06-04 00:17:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:17:50] 
[2025-06-04 00:17:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:17:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:17:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:17:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:17:50] 
[2025-06-04 00:17:50] 2025-06-03 21:56:44,453 | INFO     | **************************************
[2025-06-04 00:17:50] 2025-06-03 21:56:44,869 | INFO     | PID=8672 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 00:17:50] 2025-06-03 21:56:44,869 | INFO     | .. there are 9 such processes running
[2025-06-04 00:17:50] 2025-06-03 21:56:44,956 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 00:17:50] 2025-06-03 21:56:45,250 | INFO     | sufficient remaining disk space (496945332224 B)
[2025-06-04 00:17:50] 2025-06-03 21:56:45,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:17:50] 2025-06-03 21:56:45,250 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:17:50] 2025-06-03 21:56:45,250 | INFO     | update_server=False
[2025-06-04 00:17:50] 2025-06-03 21:56:45,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:17:50] 2025-06-03 21:56:45,252 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:17:50] 2025-06-03 21:56:45,252 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:17:50] 2025-06-03 21:56:45,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:17:50] 2025-06-03 21:56:45,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:17:50] 2025-06-03 21:56:45,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:17:50] 2025-06-03 21:56:45,253 | INFO     | aborting loop
[2025-06-04 00:17:50] 2025-06-03 21:56:45,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:17:50] 2025-06-03 21:56:45,373 | INFO     | all job control threads have been joined
[2025-06-04 00:17:50] 2025-06-03 21:56:45,982 | INFO     | all data control threads have been joined
[2025-06-04 00:17:50] 2025-06-03 21:56:46,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:17:50] 2025-06-03 21:56:46,147 | INFO     | all payload control threads have been joined
[2025-06-04 00:17:50] 2025-06-03 21:56:46,257 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:46,259 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:46,378 | INFO     | [job] control thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:46,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:46,764 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:46,877 | INFO     | [job] validate thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:46,956 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:46,988 | INFO     | [data] control thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:47,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:17:50] 2025-06-03 21:56:47,153 | INFO     | [payload] control thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:47,211 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:47,343 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:47,483 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:47,691 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:48,037 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:48,150 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:49,263 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:17:50] 2025-06-03 21:56:50,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869186115392)>', '<ExcThread(monitor, started 139868713752320)>']
[2025-06-04 00:17:50] 2025-06-03 21:56:50,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:17:50] 2025-06-03 21:56:50,282 | INFO     | [monitor] control thread has ended
[2025-06-04 00:17:50] 2025-06-03 21:56:55,233 | INFO     | all workflow threads have been joined
[2025-06-04 00:17:50] 2025-06-03 21:56:55,233 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:17:50] 2025-06-03 21:56:55,233 | INFO     | traces error code: 0
[2025-06-04 00:17:50] 2025-06-03 21:56:55,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:17:50] 2025-06-03 21:56:55,644 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:17:50] 2025-06-03 21:56:55,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:17:50] 2025-06-03 21:56:55,844 [wrapper] pilotpid: 8672
[2025-06-04 00:17:50] 2025-06-03 21:56:55,936 [wrapper] Pilot exit status: 0
[2025-06-04 00:17:50] 2025-06-03 21:56:56,469 [wrapper] pandaids: 6677473831
[2025-06-04 00:17:50] 2025-06-03 21:56:57,146 [wrapper] cleanup supervisor_pilot 28552 8673
[2025-06-04 00:17:50] 2025-06-03 21:56:57,264 [wrapper] Test setup, not cleaning
[2025-06-04 00:17:50] 2025-06-03 21:56:57,359 [wrapper] apfmon messages muted
[2025-06-04 00:17:50] 2025-06-03 21:56:57,468 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:17:50] 2025-06-03 21:56:57,563 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:17:50]  *** Error codes and diagnostics ***
[2025-06-04 00:17:50]     "exeErrorCode": 0,
[2025-06-04 00:17:50]     "exeErrorDiag": "",
[2025-06-04 00:17:50]     "pilotErrorCode": 0,
[2025-06-04 00:17:50]     "pilotErrorDiag": "",
[2025-06-04 00:17:50]  *** Listing of results directory ***
[2025-06-04 00:17:50] total 397888
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:25 pilot3.tar.gz
[2025-06-04 00:17:50] -rwx------. 1 boinc boinc     37140 Jun  3 08:32 runpilot2-wrapper.sh
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:32 queuedata.json
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc       100 Jun  3 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:17:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 20:08 run_atlas
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc       105 Jun  3 20:08 job.xml
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc      6390 Jun  3 20:08 init_data.xml
[2025-06-04 00:17:50] -rw-r--r--. 2 boinc boinc 218318293 Jun  3 20:08 EVNT.45006593._000893.pool.root.1
[2025-06-04 00:17:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:08 start_atlas.sh
[2025-06-04 00:17:50] drwxrwx--x. 2 boinc boinc        68 Jun  3 20:08 shared
[2025-06-04 00:17:50] -rw-r--r--. 2 boinc boinc    508879 Jun  3 20:08 input.tar.gz
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc         0 Jun  3 20:08 boinc_lockfile
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc      2523 Jun  3 20:08 pandaJob.out
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc    985078 Jun  3 20:08 agis_schedconf.cvmfs.json
[2025-06-04 00:17:50] drwx------. 4 boinc boinc      4096 Jun  3 20:08 pilot3
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc 182186418 Jun  3 23:53 HITS.45006595._022307.pool.root.1
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc       531 Jun  3 23:54 boinc_task_state.xml
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc      1018 Jun  3 23:55 memory_monitor_summary.json
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc   1603667 Jun  3 23:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc    370964 Jun  3 23:55 log.45006595._022307.job.log.tgz.1
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc        95 Jun  3 23:56 pilot_heartbeat.json
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc      7695 Jun  3 23:56 heartbeat.json
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc      4930 Jun  3 23:56 pilotlog.txt
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc   1183226 Jun  3 23:56 log.45006595._022307.job.log.1
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc       357 Jun  3 23:56 output.list
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc       620 Jun  3 23:56 runtime_log
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc   1576960 Jun  3 23:56 result.tar.gz
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc      8659 Jun  3 23:56 runtime_log.err
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc       656 Jun  3 23:56 oT8MDmUNag7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1cXKDmZIXRSn.diag
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc      8192 Jun  4 00:17 boinc_mmap_file
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc        28 Jun  4 00:17 wrapper_checkpoint.txt
[2025-06-04 00:17:50] -rw-r--r--. 1 boinc boinc     20567 Jun  4 00:17 stderr.txt
[2025-06-04 00:17:50] HITS file was successfully produced:
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc 182186418 Jun  3 23:53 shared/HITS.pool.root.1
[2025-06-04 00:17:50]  *** Contents of shared directory: ***
[2025-06-04 00:17:50] total 393180
[2025-06-04 00:17:50] -rw-r--r--. 2 boinc boinc 218318293 Jun  3 20:08 ATLAS.root_0
[2025-06-04 00:17:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:08 start_atlas.sh
[2025-06-04 00:17:50] -rw-r--r--. 2 boinc boinc    508879 Jun  3 20:08 input.tar.gz
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc 182186418 Jun  3 23:53 HITS.pool.root.1
[2025-06-04 00:17:50] -rw-------. 1 boinc boinc   1576960 Jun  3 23:56 result.tar.gz
00:17:52 (5026): run_atlas exited; CPU time 51012.409577
00:17:52 (5026): called boinc_finish(0)

</stderr_txt>
]]>

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