Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:05:49 (23760): wrapper (7.7.26015): starting
18:05:49 (23760): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:05:49] Arguments: --nthreads 8
[2025-06-03 18:05:49] Threads: 8
[2025-06-03 18:05:49] Checking for CVMFS
[2025-06-03 18:05:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:05:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:05:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:05:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:05:52] 2.11.2.0 20954 32127 88488 146746 3 103 19250356 25165824 3876 130560 0 16291881 99.808 18042887 2044 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 18:05:52] CVMFS is ok
[2025-06-03 18:05:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:05:52] Checking for apptainer binary...
[2025-06-03 18:05:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:05:52] Running /usr/bin/apptainer --version
[2025-06-03 18:05:52] apptainer version 1.3.2-1.el7
[2025-06-03 18:05:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:06:04] cg-vwn319.simple-grid.lan
[2025-06-03 18:06:04] apptainer works
[2025-06-03 18:06:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:06:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:06:04] Starting ATLAS job with PandaID=6677495044
[2025-06-03 18:06:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:11:17]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:11:17] 2025-06-03 20:10:51,571 | INFO     | monitor loop #1035: job 0:6677495044 is in state 'finished'
[2025-06-03 22:11:17] 2025-06-03 20:10:51,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:11:17] 2025-06-03 20:10:54,076 | INFO     | monitor loop #1036: job 0:6677495044 is in state 'finished'
[2025-06-03 22:11:17] 2025-06-03 20:10:54,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:11:17] 2025-06-03 20:10:54,381 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 22:11:17] 2025-06-03 20:10:54,381 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6677495044/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:11:17] 2025-06-03 20:10:54,382 | INFO     | extracted standard info from prmon json
[2025-06-03 22:11:17] 2025-06-03 20:10:54,382 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:11:17] 2025-06-03 20:10:54,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:11:17] 2025-06-03 20:10:54,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:11:17] 2025-06-03 20:10:54,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:11:17] 2025-06-03 20:10:54,388 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:11:17] 2025-06-03 20:10:54,388 | INFO     | sum of square deviations: 3822136780.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,391 | INFO     | sum of deviations: 60555653247.00001
[2025-06-03 22:11:17] 2025-06-03 20:10:54,391 | INFO     | mean x: 1748974415.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,391 | INFO     | mean y: 2431282.316017316
[2025-06-03 22:11:17] 2025-06-03 20:10:54,391 | INFO     | -- intersect: -27707275174.765484
[2025-06-03 22:11:17] 2025-06-03 20:10:54,391 | INFO     | intersect: -27707275174.765484
[2025-06-03 22:11:17] 2025-06-03 20:10:54,392 | INFO     | chi2: 4.526909653621274
[2025-06-03 22:11:17] 2025-06-03 20:10:54,392 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 22:11:17] 2025-06-03 20:10:54,394 | INFO     | sum of deviations: 74096068284.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,394 | INFO     | mean x: 1748974262.5
[2025-06-03 22:11:17] 2025-06-03 20:10:54,394 | INFO     | mean y: 2439616.8141592923
[2025-06-03 22:11:17] 2025-06-03 20:10:54,395 | INFO     | -- intersect: -36203793556.0642
[2025-06-03 22:11:17] 2025-06-03 20:10:54,395 | INFO     | intersect: -36203793556.0642
[2025-06-03 22:11:17] 2025-06-03 20:10:54,395 | INFO     | chi2: 3.7821426955423054
[2025-06-03 22:11:17] 2025-06-03 20:10:54,396 | INFO     | current chi2=3.7821426955423054 (change=16.451995181374937 %)
[2025-06-03 22:11:17] 2025-06-03 20:10:54,396 | INFO     | right removable region: 225
[2025-06-03 22:11:17] 2025-06-03 20:10:54,396 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 22:11:17] 2025-06-03 20:10:54,398 | INFO     | sum of deviations: -8862012930.5
[2025-06-03 22:11:17] 2025-06-03 20:10:54,398 | INFO     | mean x: 1748974567.5
[2025-06-03 22:11:17] 2025-06-03 20:10:54,398 | INFO     | mean y: 2474767.1991150444
[2025-06-03 22:11:17] 2025-06-03 20:10:54,398 | INFO     | -- intersect: 4332801192.442934
[2025-06-03 22:11:17] 2025-06-03 20:10:54,398 | INFO     | intersect: 4332801192.442934
[2025-06-03 22:11:17] 2025-06-03 20:10:54,399 | INFO     | chi2: 0.9236390534538633
[2025-06-03 22:11:17] 2025-06-03 20:10:54,399 | INFO     | current chi2=0.9236390534538633 (change=79.59669787721512 %)
[2025-06-03 22:11:17] 2025-06-03 20:10:54,399 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,401 | INFO     | sum of deviations: -15455862678.000002
[2025-06-03 22:11:17] 2025-06-03 20:10:54,401 | INFO     | mean x: 1748974720.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,401 | INFO     | mean y: 2479030.271493213
[2025-06-03 22:11:17] 2025-06-03 20:10:54,401 | INFO     | -- intersect: 8079113529.004657
[2025-06-03 22:11:17] 2025-06-03 20:10:54,401 | INFO     | intersect: 8079113529.004657
[2025-06-03 22:11:17] 2025-06-03 20:10:54,402 | INFO     | chi2: 0.8484627817450162
[2025-06-03 22:11:17] 2025-06-03 20:10:54,402 | INFO     | current chi2=0.8484627817450162 (change=8.139139572729452 %)
[2025-06-03 22:11:17] 2025-06-03 20:10:54,402 | INFO     | left removable region: 20
[2025-06-03 22:11:17] 2025-06-03 20:10:54,402 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,404 | INFO     | sum of deviations: 6997452374.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,404 | INFO     | mean x: 1748974842.0
[2025-06-03 22:11:17] 2025-06-03 20:10:54,404 | INFO     | mean y: 2483063.575609756
[2025-06-03 22:11:17] 2025-06-03 20:10:54,404 | INFO     | -- intersect: -4578870830.802704
[2025-06-03 22:11:17] 2025-06-03 20:10:54,405 | INFO     | intersect: -4578870830.802704
[2025-06-03 22:11:17] 2025-06-03 20:10:54,405 | INFO     | chi2: 0.0002150237863405951
[2025-06-03 22:11:17] 2025-06-03 20:10:54,405 | INFO     | -- intersect: -4578870830.802704
[2025-06-03 22:11:17] 2025-06-03 20:10:54,405 | INFO     | current memory leak: 2.62 B/s (using 205 data points, chi2=0.00)
[2025-06-03 22:11:17] 2025-06-03 20:10:54,406 | INFO     | ..............................
[2025-06-03 22:11:17] 2025-06-03 20:10:54,406 | INFO     | . Timing measurements:
[2025-06-03 22:11:17] 2025-06-03 20:10:54,406 | INFO     | . get job = 0 s
[2025-06-03 22:11:17] 2025-06-03 20:10:54,407 | INFO     | . initial setup = 6 s
[2025-06-03 22:11:17] 2025-06-03 20:10:54,407 | INFO     | . payload setup = 139 s
[2025-06-03 22:11:17] 2025-06-03 20:10:54,407 | INFO     | . stage-in = 0 s
[2025-06-03 22:11:17] 2025-06-03 20:10:54,407 | INFO     | . payload execution = 14180 s
[2025-06-03 22:11:17] 2025-06-03 20:10:54,407 | INFO     | . stage-out = 2 s
[2025-06-03 22:11:17] 2025-06-03 20:10:54,407 | INFO     | . log creation = 0 s
[2025-06-03 22:11:17] 2025-06-03 20:10:54,407 | INFO     | ..............................
[2025-06-03 22:11:17] 2025-06-03 20:10:55,006 | INFO     | 
[2025-06-03 22:11:17] 2025-06-03 20:10:55,006 | INFO     | job summary report
[2025-06-03 22:11:17] 2025-06-03 20:10:55,006 | INFO     | --------------------------------------------------
[2025-06-03 22:11:17] 2025-06-03 20:10:55,006 | INFO     | PanDA job id: 6677495044
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | task id: 45006595
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | errors: (none)
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | pilot state: finished 
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | transexitcode: 0
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | exeerrorcode: 0
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | exeerrordiag: 
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | exitcode: 0
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | exitmsg: OK
[2025-06-03 22:11:17] 2025-06-03 20:10:55,007 | INFO     | cpuconsumptiontime: 51229 s
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | nevents: 400
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | neventsw: 0
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | pid: 3313
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | pgrp: 3313
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | corecount: 8
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | event service: False
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 23: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 66: 2405534, 77: 2405562, 85: 2405824, 88: 2406132, 14
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | --------------------------------------------------
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | 
[2025-06-03 22:11:17] 2025-06-03 20:10:55,008 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 22:11:17] 2025-06-03 20:10:55,177 | INFO     | PID=27465 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 22:11:17] 2025-06-03 20:10:55,178 | INFO     | .. there are 8 such processes running
[2025-06-03 22:11:17] 2025-06-03 20:10:55,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | job 6677495044 has completed (purged errors)
[2025-06-03 22:11:17] 2025-06-03 20:10:55,189 | INFO     | overall cleanup function is called
[2025-06-03 22:11:17] 2025-06-03 20:10:56,200 | INFO     | --- collectZombieJob: --- 10, [3313]
[2025-06-03 22:11:17] 2025-06-03 20:10:56,200 | INFO     | zombie collector waiting for pid 3313
[2025-06-03 22:11:17] 2025-06-03 20:10:56,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:11:17] 2025-06-03 20:10:56,200 | INFO     | collected zombie processes
[2025-06-03 22:11:17] 2025-06-03 20:10:56,201 | INFO     | will attempt to kill all subprocesses of pid=3313
[2025-06-03 22:11:17] 2025-06-03 20:10:56,305 | INFO     | process IDs to be killed: [3313] (in reverse order)
[2025-06-03 22:11:17] 2025-06-03 20:10:56,397 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:11:17] 2025-06-03 20:10:56,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:11:17] 2025-06-03 20:10:56,400 | INFO     | did not find any defunct processes belonging to 3313
[2025-06-03 22:11:17] 2025-06-03 20:10:56,404 | INFO     | did not find any defunct processes belonging to 3313
[2025-06-03 22:11:17] 2025-06-03 20:10:56,404 | INFO     | ready for new job
[2025-06-03 22:11:17] 2025-06-03 20:10:56,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:11:17] 2025-06-03 20:10:56,406 | INFO     | **************************************
[2025-06-03 22:11:17] 2025-06-03 20:10:56,406 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:11:17] 2025-06-03 20:10:56,406 | INFO     | **************************************
[2025-06-03 22:11:17] 2025-06-03 20:10:56,407 | INFO     | 
[2025-06-03 22:11:17] 2025-06-03 20:10:56,411 | INFO     | pilot is running in a VM
[2025-06-03 22:11:17] 2025-06-03 20:10:56,412 | INFO     | architecture information:
[2025-06-03 22:11:17] 2025-06-03 20:10:56,416 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:11:17] 2025-06-03 20:10:56,565 | INFO     | cat /etc/os-release:
[2025-06-03 22:11:17] NAME="CentOS Linux"
[2025-06-03 22:11:17] VERSION="7 (Core)"
[2025-06-03 22:11:17] ID="centos"
[2025-06-03 22:11:17] ID_LIKE="rhel fedora"
[2025-06-03 22:11:17] VERSION_ID="7"
[2025-06-03 22:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:11:17] ANSI_COLOR="0;31"
[2025-06-03 22:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:11:17] HOME_URL="https://www.centos.org/"
[2025-06-03 22:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:11:17] 
[2025-06-03 22:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:11:17] 
[2025-06-03 22:11:17] 2025-06-03 20:10:56,565 | INFO     | **************************************
[2025-06-03 22:11:17] 2025-06-03 20:10:57,069 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 22:11:17] 2025-06-03 20:10:57,184 | INFO     | sufficient remaining disk space (497227399168 B)
[2025-06-03 22:11:17] 2025-06-03 20:10:57,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:11:17] 2025-06-03 20:10:57,184 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:11:17] 2025-06-03 20:10:57,184 | INFO     | update_server=False
[2025-06-03 22:11:17] 2025-06-03 20:10:57,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:11:17] 2025-06-03 20:10:57,185 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:11:17] 2025-06-03 20:10:57,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:11:17] 2025-06-03 20:10:57,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:11:17] 2025-06-03 20:10:57,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:11:17] 2025-06-03 20:10:57,471 | INFO     | all data control threads have been joined
[2025-06-03 22:11:17] 2025-06-03 20:10:57,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:11:17] 2025-06-03 20:10:57,594 | INFO     | aborting loop
[2025-06-03 22:11:17] 2025-06-03 20:10:57,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:11:17] 2025-06-03 20:10:57,754 | INFO     | all payload control threads have been joined
[2025-06-03 22:11:17] 2025-06-03 20:10:58,190 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:58,371 | INFO     | all job control threads have been joined
[2025-06-03 22:11:17] 2025-06-03 20:10:58,478 | INFO     | [data] control thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:58,543 | INFO     | [job] validate thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:58,600 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:58,760 | INFO     | [payload] control thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:58,922 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:58,990 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:59,088 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:59,272 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:59,378 | INFO     | [job] control thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:59,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:11:17] 2025-06-03 20:10:59,642 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:59,649 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:10:59,718 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:11:00,566 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:11:01,337 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:11:07,812 | INFO     | job.realtimelogging is not enabled
[2025-06-03 22:11:17] 2025-06-03 20:11:08,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:11:17] 2025-06-03 20:11:10,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640431646528)>', '<ExcThread(monitor, started 139639830595328)>']
[2025-06-03 22:11:17] 2025-06-03 20:11:10,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:11:17] 2025-06-03 20:11:10,263 | INFO     | [monitor] control thread has ended
[2025-06-03 22:11:17] 2025-06-03 20:11:15,173 | INFO     | all workflow threads have been joined
[2025-06-03 22:11:17] 2025-06-03 20:11:15,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:11:17] 2025-06-03 20:11:15,174 | INFO     | traces error code: 0
[2025-06-03 22:11:17] 2025-06-03 20:11:15,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:11:17] 2025-06-03 20:11:15,425 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:11:17] 2025-06-03 20:11:15,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:11:17] 2025-06-03 20:11:15,533 [wrapper] pilotpid: 27465
[2025-06-03 22:11:17] 2025-06-03 20:11:15,618 [wrapper] Pilot exit status: 0
[2025-06-03 22:11:17] 2025-06-03 20:11:15,678 [wrapper] pandaids: 6677495044
[2025-06-03 22:11:17] 2025-06-03 20:11:16,163 [wrapper] cleanup supervisor_pilot   836 27466
[2025-06-03 22:11:17] 2025-06-03 20:11:16,178 [wrapper] Test setup, not cleaning
[2025-06-03 22:11:17] 2025-06-03 20:11:16,197 [wrapper] apfmon messages muted
[2025-06-03 22:11:17] 2025-06-03 20:11:16,201 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:11:17] 2025-06-03 20:11:16,204 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:11:17]  *** Error codes and diagnostics ***
[2025-06-03 22:11:17]     "exeErrorCode": 0,
[2025-06-03 22:11:17]     "exeErrorDiag": "",
[2025-06-03 22:11:17]     "pilotErrorCode": 0,
[2025-06-03 22:11:17]     "pilotErrorDiag": "",
[2025-06-03 22:11:17]  *** Listing of results directory ***
[2025-06-03 22:11:17] total 394036
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:25 pilot3.tar.gz
[2025-06-03 22:11:17] -rwx------. 1 boinc boinc     37140 Jun  3 08:32 runpilot2-wrapper.sh
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:32 queuedata.json
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc       100 Jun  3 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:11:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 18:05 run_atlas
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc       105 Jun  3 18:05 job.xml
[2025-06-03 22:11:17] -rw-r--r--. 2 boinc boinc 212668110 Jun  3 18:05 EVNT.45006593._000894.pool.root.1
[2025-06-03 22:11:17] -rw-r--r--. 2 boinc boinc    508883 Jun  3 18:05 input.tar.gz
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc      6391 Jun  3 18:05 init_data.xml
[2025-06-03 22:11:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:05 start_atlas.sh
[2025-06-03 22:11:17] drwxrwx--x. 2 boinc boinc        68 Jun  3 18:05 shared
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc         0 Jun  3 18:05 boinc_lockfile
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc      2524 Jun  3 18:06 pandaJob.out
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc    982716 Jun  3 18:09 agis_schedconf.cvmfs.json
[2025-06-03 22:11:17] drwx------. 4 boinc boinc      4096 Jun  3 18:09 pilot3
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc 183709947 Jun  3 22:09 HITS.45006595._022354.pool.root.1
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc       531 Jun  3 22:10 boinc_task_state.xml
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc      1019 Jun  3 22:10 memory_monitor_summary.json
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc   1603667 Jun  3 22:10 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc        95 Jun  3 22:10 pilot_heartbeat.json
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc    401616 Jun  3 22:10 log.45006595._022354.job.log.tgz.1
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc      7687 Jun  3 22:10 heartbeat.json
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc      8192 Jun  3 22:11 boinc_mmap_file
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc        28 Jun  3 22:11 wrapper_checkpoint.txt
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc      4488 Jun  3 22:11 pilotlog.txt
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc   1243864 Jun  3 22:11 log.45006595._022354.job.log.1
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc       357 Jun  3 22:11 output.list
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc       620 Jun  3 22:11 runtime_log
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc   1669120 Jun  3 22:11 result.tar.gz
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc       656 Jun  3 22:11 UYdMDmKNag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPcXKDmswq2Ko.diag
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc      8659 Jun  3 22:11 runtime_log.err
[2025-06-03 22:11:17] -rw-r--r--. 1 boinc boinc     20796 Jun  3 22:11 stderr.txt
[2025-06-03 22:11:17] HITS file was successfully produced:
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc 183709947 Jun  3 22:09 shared/HITS.pool.root.1
[2025-06-03 22:11:17]  *** Contents of shared directory: ***
[2025-06-03 22:11:17] total 389240
[2025-06-03 22:11:17] -rw-r--r--. 2 boinc boinc 212668110 Jun  3 18:05 ATLAS.root_0
[2025-06-03 22:11:17] -rw-r--r--. 2 boinc boinc    508883 Jun  3 18:05 input.tar.gz
[2025-06-03 22:11:17] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:05 start_atlas.sh
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc 183709947 Jun  3 22:09 HITS.pool.root.1
[2025-06-03 22:11:17] -rw-------. 1 boinc boinc   1669120 Jun  3 22:11 result.tar.gz
22:11:18 (23760): run_atlas exited; CPU time 51427.495798
22:11:18 (23760): called boinc_finish(0)

</stderr_txt>
]]>

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