Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:22:23 (3667): wrapper (7.7.26015): starting
17:22:23 (3667): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:22:23] Arguments: --nthreads 8
[2025-06-03 17:22:23] Threads: 8
[2025-06-03 17:22:23] Checking for CVMFS
[2025-06-03 17:22:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:22:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:22:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:22:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:22:24] 2.11.2.0 30898 31930 90312 146746 3 114 12645385 25165824 4365 130560 0 15978844 99.800 18749296 2311 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:22:24] CVMFS is ok
[2025-06-03 17:22:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:22:24] Checking for apptainer binary...
[2025-06-03 17:22:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:22:24] Running /usr/bin/apptainer --version
[2025-06-03 17:22:24] apptainer version 1.3.2-1.el7
[2025-06-03 17:22:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:22:26] cg-vwn285.simple-grid.lan
[2025-06-03 17:22:26] apptainer works
[2025-06-03 17:22:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:22:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:22:26] Starting ATLAS job with PandaID=6677495352
[2025-06-03 17:22:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:12:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:12:33] 2025-06-03 19:06:39,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,550 | INFO     | monitor loop #912: job 0:6677495352 is in state 'finished'
[2025-06-03 22:12:33] 2025-06-03 19:06:41,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,672 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 22:12:33] 2025-06-03 19:06:41,673 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6677495352/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,674 | INFO     | extracted standard info from prmon json
[2025-06-03 22:12:33] 2025-06-03 19:06:41,674 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:12:33] 2025-06-03 19:06:41,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:12:33] 2025-06-03 19:06:41,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:12:33] 2025-06-03 19:06:41,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:12:33] 2025-06-03 19:06:41,680 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:12:33] 2025-06-03 19:06:41,681 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,683 | INFO     | sum of deviations: -34503257308.99999
[2025-06-03 22:12:33] 2025-06-03 19:06:41,683 | INFO     | mean x: 1748970873.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,683 | INFO     | mean y: 2554238.694063927
[2025-06-03 22:12:33] 2025-06-03 19:06:41,683 | INFO     | -- intersect: 18531084049.887657
[2025-06-03 22:12:33] 2025-06-03 19:06:41,684 | INFO     | intersect: 18531084049.887657
[2025-06-03 22:12:33] 2025-06-03 19:06:41,684 | INFO     | chi2: 1.9320376277476838
[2025-06-03 22:12:33] 2025-06-03 19:06:41,685 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 22:12:33] 2025-06-03 19:06:41,686 | INFO     | sum of deviations: -33074326422.500015
[2025-06-03 22:12:33] 2025-06-03 19:06:41,686 | INFO     | mean x: 1748970720.5
[2025-06-03 22:12:33] 2025-06-03 19:06:41,687 | INFO     | mean y: 2555238.387850467
[2025-06-03 22:12:33] 2025-06-03 19:06:41,687 | INFO     | -- intersect: 19038011313.323196
[2025-06-03 22:12:33] 2025-06-03 19:06:41,687 | INFO     | intersect: 19038011313.323196
[2025-06-03 22:12:33] 2025-06-03 19:06:41,687 | INFO     | chi2: 1.9297520374502415
[2025-06-03 22:12:33] 2025-06-03 19:06:41,687 | INFO     | current chi2=1.9297520374502415 (change=0.1182994712223504 %)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,687 | INFO     | right removable region: 213
[2025-06-03 22:12:33] 2025-06-03 19:06:41,688 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 22:12:33] 2025-06-03 19:06:41,690 | INFO     | sum of deviations: -73743254105.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,690 | INFO     | mean x: 1748971025.5
[2025-06-03 22:12:33] 2025-06-03 19:06:41,690 | INFO     | mean y: 2581460.8971962617
[2025-06-03 22:12:33] 2025-06-03 19:06:41,690 | INFO     | -- intersect: 42444465271.37966
[2025-06-03 22:12:33] 2025-06-03 19:06:41,690 | INFO     | intersect: 42444465271.37966
[2025-06-03 22:12:33] 2025-06-03 19:06:41,691 | INFO     | chi2: 0.2443069254541218
[2025-06-03 22:12:33] 2025-06-03 19:06:41,691 | INFO     | current chi2=0.2443069254541218 (change=87.35496027896062 %)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,692 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,694 | INFO     | sum of deviations: -73561660521.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,694 | INFO     | mean x: 1748971178.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,694 | INFO     | mean y: 2581287.5789473685
[2025-06-03 22:12:33] 2025-06-03 19:06:41,695 | INFO     | -- intersect: 45451843427.66854
[2025-06-03 22:12:33] 2025-06-03 19:06:41,695 | INFO     | intersect: 45451843427.66854
[2025-06-03 22:12:33] 2025-06-03 19:06:41,695 | INFO     | chi2: 0.21463287607899528
[2025-06-03 22:12:33] 2025-06-03 19:06:41,695 | INFO     | current chi2=0.21463287607899528 (change=12.146217025967603 %)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,695 | INFO     | left removable region: 20
[2025-06-03 22:12:33] 2025-06-03 19:06:41,696 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,698 | INFO     | sum of deviations: -60393933157.99999
[2025-06-03 22:12:33] 2025-06-03 19:06:41,699 | INFO     | mean x: 1748971300.0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,699 | INFO     | mean y: 2574552.2590673575
[2025-06-03 22:12:33] 2025-06-03 19:06:41,699 | INFO     | -- intersect: 47387183982.37112
[2025-06-03 22:12:33] 2025-06-03 19:06:41,699 | INFO     | intersect: 47387183982.37112
[2025-06-03 22:12:33] 2025-06-03 19:06:41,699 | INFO     | chi2: 0.2057459789724976
[2025-06-03 22:12:33] 2025-06-03 19:06:41,700 | INFO     | -- intersect: 47387183982.37112
[2025-06-03 22:12:33] 2025-06-03 19:06:41,700 | INFO     | current memory leak: -27.09 B/s (using 193 data points, chi2=0.21)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,701 | INFO     | ..............................
[2025-06-03 22:12:33] 2025-06-03 19:06:41,701 | INFO     | . Timing measurements:
[2025-06-03 22:12:33] 2025-06-03 19:06:41,701 | INFO     | . get job = 0 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,701 | INFO     | . initial setup = 2 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,701 | INFO     | . payload setup = 14 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,702 | INFO     | . stage-in = 0 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,702 | INFO     | . payload execution = 13379 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,702 | INFO     | . stage-out = 1 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,702 | INFO     | . log creation = 0 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,702 | INFO     | ..............................
[2025-06-03 22:12:33] 2025-06-03 19:06:41,884 | INFO     | 
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | job summary report
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | --------------------------------------------------
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | PanDA job id: 6677495352
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | task id: 45006595
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | errors: (none)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | pilot state: finished 
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | transexitcode: 0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,885 | INFO     | exeerrorcode: 0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | exeerrordiag: 
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | exitcode: 0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | exitmsg: OK
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | cpuconsumptiontime: 51054 s
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | nevents: 400
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | neventsw: 0
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | pid: 15935
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | pgrp: 15935
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | corecount: 8
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | event service: False
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | sizes: {0: 2405183, 1: 2405183, 10: 2405417, 12: 2405445, 13397: 2435008, 13399: 2443951, 13401: 2444135, 13413: 2444305}
[2025-06-03 22:12:33] 2025-06-03 19:06:41,886 | INFO     | --------------------------------------------------
[2025-06-03 22:12:33] 2025-06-03 19:06:41,887 | INFO     | 
[2025-06-03 22:12:33] 2025-06-03 19:06:41,887 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-03 22:12:33] 2025-06-03 19:06:41,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:12:33] 2025-06-03 19:06:41,930 | INFO     | job 6677495352 has completed (purged errors)
[2025-06-03 22:12:33] 2025-06-03 19:06:41,930 | INFO     | overall cleanup function is called
[2025-06-03 22:12:33] 2025-06-03 19:06:42,727 | INFO     | PID=7393 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 22:12:33] 2025-06-03 19:06:42,727 | INFO     | .. there are 9 such processes running
[2025-06-03 22:12:33] 2025-06-03 19:06:42,938 | INFO     | --- collectZombieJob: --- 10, [15935]
[2025-06-03 22:12:33] 2025-06-03 19:06:42,939 | INFO     | zombie collector waiting for pid 15935
[2025-06-03 22:12:33] 2025-06-03 19:06:42,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:12:33] 2025-06-03 19:06:42,939 | INFO     | collected zombie processes
[2025-06-03 22:12:33] 2025-06-03 19:06:42,939 | INFO     | will attempt to kill all subprocesses of pid=15935
[2025-06-03 22:12:33] 2025-06-03 19:06:43,040 | INFO     | process IDs to be killed: [15935] (in reverse order)
[2025-06-03 22:12:33] 2025-06-03 19:06:43,250 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:12:33] 2025-06-03 19:06:43,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:12:33] 2025-06-03 19:06:43,256 | INFO     | did not find any defunct processes belonging to 15935
[2025-06-03 22:12:33] 2025-06-03 19:06:43,259 | INFO     | did not find any defunct processes belonging to 15935
[2025-06-03 22:12:33] 2025-06-03 19:06:43,260 | INFO     | ready for new job
[2025-06-03 22:12:33] 2025-06-03 19:06:43,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:12:33] 2025-06-03 19:06:43,262 | INFO     | **************************************
[2025-06-03 22:12:33] 2025-06-03 19:06:43,262 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:12:33] 2025-06-03 19:06:43,262 | INFO     | **************************************
[2025-06-03 22:12:33] 2025-06-03 19:06:43,263 | INFO     | 
[2025-06-03 22:12:33] 2025-06-03 19:06:43,263 | INFO     | pilot is running in a VM
[2025-06-03 22:12:33] 2025-06-03 19:06:43,263 | INFO     | architecture information:
[2025-06-03 22:12:33] 2025-06-03 19:06:43,264 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:12:33] 2025-06-03 19:06:43,315 | INFO     | cat /etc/os-release:
[2025-06-03 22:12:33] NAME="CentOS Linux"
[2025-06-03 22:12:33] VERSION="7 (Core)"
[2025-06-03 22:12:33] ID="centos"
[2025-06-03 22:12:33] ID_LIKE="rhel fedora"
[2025-06-03 22:12:33] VERSION_ID="7"
[2025-06-03 22:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:12:33] ANSI_COLOR="0;31"
[2025-06-03 22:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:12:33] HOME_URL="https://www.centos.org/"
[2025-06-03 22:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:12:33] 
[2025-06-03 22:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:12:33] 
[2025-06-03 22:12:33] 2025-06-03 19:06:43,315 | INFO     | **************************************
[2025-06-03 22:12:33] 2025-06-03 19:06:43,818 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-03 22:12:33] 2025-06-03 19:06:43,886 | INFO     | sufficient remaining disk space (497069064192 B)
[2025-06-03 22:12:33] 2025-06-03 19:06:43,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:12:33] 2025-06-03 19:06:43,887 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:12:33] 2025-06-03 19:06:43,887 | INFO     | update_server=False
[2025-06-03 22:12:33] 2025-06-03 19:06:43,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:12:33] 2025-06-03 19:06:43,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:12:33] 2025-06-03 19:06:44,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:12:33] 2025-06-03 19:06:44,054 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 22:12:33] 2025-06-03 19:06:44,055 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 22:12:33] 2025-06-03 19:06:44,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:12:33] 2025-06-03 19:06:44,055 | INFO     | will abort loop
[2025-06-03 22:12:33] 2025-06-03 19:06:44,673 | INFO     | all job control threads have been joined
[2025-06-03 22:12:33] 2025-06-03 19:06:44,735 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:12:33] 2025-06-03 19:06:44,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:12:33] 2025-06-03 19:06:44,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:12:33] 2025-06-03 19:06:44,769 | INFO     | all data control threads have been joined
[2025-06-03 22:12:33] 2025-06-03 19:06:44,893 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:44,899 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:44,975 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,061 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,144 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,168 | INFO     | all payload control threads have been joined
[2025-06-03 22:12:33] 2025-06-03 19:06:45,277 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,401 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:12:33] 2025-06-03 19:06:45,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,648 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,679 | INFO     | [job] control thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:45,775 | INFO     | [data] control thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:46,038 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:46,042 | INFO     | [job] validate thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:46,055 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:46,174 | INFO     | [payload] control thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:49,523 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:12:33] 2025-06-03 19:06:49,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421967411008)>', '<ExcThread(monitor, started 140421514643200)>']
[2025-06-03 22:12:33] 2025-06-03 19:06:49,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:12:33] 2025-06-03 19:06:49,765 | INFO     | [monitor] control thread has ended
[2025-06-03 22:12:33] 2025-06-03 19:06:54,769 | INFO     | all workflow threads have been joined
[2025-06-03 22:12:33] 2025-06-03 19:06:54,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:12:33] 2025-06-03 19:06:54,770 | INFO     | traces error code: 0
[2025-06-03 22:12:33] 2025-06-03 19:06:54,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:12:33] 2025-06-03 19:06:55,100 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:12:33] 2025-06-03 19:06:55,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:12:33] 2025-06-03 19:06:55,403 [wrapper] pilotpid: 7393
[2025-06-03 22:12:33] 2025-06-03 19:06:55,462 [wrapper] Pilot exit status: 0
[2025-06-03 22:12:33] 2025-06-03 19:06:55,847 [wrapper] pandaids: 6677495352
[2025-06-03 22:12:33] 2025-06-03 19:06:56,073 [wrapper] cleanup supervisor_pilot  5853 7394
[2025-06-03 22:12:33] 2025-06-03 19:06:56,165 [wrapper] Test setup, not cleaning
[2025-06-03 22:12:33] 2025-06-03 19:06:56,174 [wrapper] apfmon messages muted
[2025-06-03 22:12:33] 2025-06-03 19:06:56,193 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:12:33] 2025-06-03 19:06:56,200 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:12:33]  *** Error codes and diagnostics ***
[2025-06-03 22:12:33]     "exeErrorCode": 0,
[2025-06-03 22:12:33]     "exeErrorDiag": "",
[2025-06-03 22:12:33]     "pilotErrorCode": 0,
[2025-06-03 22:12:33]     "pilotErrorDiag": "",
[2025-06-03 22:12:33]  *** Listing of results directory ***
[2025-06-03 22:12:33] total 397752
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc    495897 Jun  3 08:33 pilot3.tar.gz
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:35 queuedata.json
[2025-06-03 22:12:33] -rwx------. 1 boinc boinc     37140 Jun  3 08:36 runpilot2-wrapper.sh
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:12:33] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:22 run_atlas
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:22 job.xml
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc      6392 Jun  3 17:22 init_data.xml
[2025-06-03 22:12:33] -rw-r--r--. 2 boinc boinc 218240037 Jun  3 17:22 EVNT.45006593._000905.pool.root.1
[2025-06-03 22:12:33] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:22 start_atlas.sh
[2025-06-03 22:12:33] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:22 shared
[2025-06-03 22:12:33] -rw-r--r--. 2 boinc boinc    508879 Jun  3 17:22 input.tar.gz
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:22 boinc_lockfile
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:22 pandaJob.out
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc    982716 Jun  3 17:22 agis_schedconf.cvmfs.json
[2025-06-03 22:12:33] drwx------. 4 boinc boinc      4096 Jun  3 17:22 pilot3
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc 182169460 Jun  3 21:05 HITS.45006595._022615.pool.root.1
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:06 boinc_task_state.xml
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc      1019 Jun  3 21:06 memory_monitor_summary.json
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc        95 Jun  3 21:06 pilot_heartbeat.json
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc   1603667 Jun  3 21:06 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc    374512 Jun  3 21:06 log.45006595._022615.job.log.tgz.1
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc      7692 Jun  3 21:06 heartbeat.json
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc      4603 Jun  3 21:06 pilotlog.txt
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc   1160563 Jun  3 21:06 log.45006595._022615.job.log.1
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc       357 Jun  3 21:06 output.list
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:06 runtime_log
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc   1556480 Jun  3 21:06 result.tar.gz
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc       656 Jun  3 21:06 w5CNDmPRag7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0eXKDmSgMcrn.diag
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc      8673 Jun  3 21:06 runtime_log.err
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc      8192 Jun  3 22:12 boinc_mmap_file
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc        28 Jun  3 22:12 wrapper_checkpoint.txt
[2025-06-03 22:12:33] -rw-r--r--. 1 boinc boinc     20787 Jun  3 22:12 stderr.txt
[2025-06-03 22:12:33] HITS file was successfully produced:
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc 182169460 Jun  3 21:05 shared/HITS.pool.root.1
[2025-06-03 22:12:33]  *** Contents of shared directory: ***
[2025-06-03 22:12:33] total 393064
[2025-06-03 22:12:33] -rw-r--r--. 2 boinc boinc 218240037 Jun  3 17:22 ATLAS.root_0
[2025-06-03 22:12:33] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:22 start_atlas.sh
[2025-06-03 22:12:33] -rw-r--r--. 2 boinc boinc    508879 Jun  3 17:22 input.tar.gz
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc 182169460 Jun  3 21:05 HITS.pool.root.1
[2025-06-03 22:12:33] -rw-------. 1 boinc boinc   1556480 Jun  3 21:06 result.tar.gz
22:12:35 (3667): run_atlas exited; CPU time 51216.335516
22:12:35 (3667): called boinc_finish(0)

</stderr_txt>
]]>

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