Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:14:16 (3721189): wrapper (7.7.26015): starting
06:14:16 (3721189): wrapper: running run_atlas (--nthreads 6)
[2025-06-04 06:14:16] Arguments: --nthreads 6
[2025-06-04 06:14:16] Threads: 6
[2025-06-04 06:14:16] Checking for CVMFS
[2025-06-04 06:14:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:14:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:14:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:14:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:14:17] 2.12.7.0 2690945 1557 83904 146755 3 187 34482111 52428801 922 130560 0 2812593 99.996 386655 1449 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 06:14:17] CVMFS is ok
[2025-06-04 06:14:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:14:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 06:14:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 06:14:17] Further information can be found at the LHC@home message board.
[2025-06-04 06:14:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:14:17] Checking for apptainer binary...
[2025-06-04 06:14:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:14:17] Running /usr/bin/apptainer --version
[2025-06-04 06:14:17] apptainer version 1.4.0-1.el9
[2025-06-04 06:14:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:14:17] Atto003
[2025-06-04 06:14:17] apptainer works
[2025-06-04 06:14:17] Set ATHENA_PROC_NUMBER=6
[2025-06-04 06:14:17] Set ATHENA_CORE_NUMBER=6
[2025-06-04 06:14:17] Starting ATLAS job with PandaID=6677473501
[2025-06-04 06:14:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:49:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:49:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:49:22]  is_altstaged=None
[2025-06-04 07:49:22]  is_tar=False
[2025-06-04 07:49:22]  lfn=log.45006595._022089.job.log.tgz.1
[2025-06-04 07:49:22]  mtime=0
[2025-06-04 07:49:22]  protocol_id=None
[2025-06-04 07:49:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:49:22]  replicas=None
[2025-06-04 07:49:22]  scope=mc23_13p6TeV
[2025-06-04 07:49:22]  status=None
[2025-06-04 07:49:22]  status_code=0
[2025-06-04 07:49:22]  storage_token=
[2025-06-04 07:49:22]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6677473501/log.45006595._022089.job.log.tgz.1
[2025-06-04 07:49:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/da/log.45006595._022089.job.log.tgz.1
[2025-06-04 07:49:22]  workdir=None
[2025-06-04 07:49:22] ]
[2025-06-04 07:49:22] 2025-06-03 22:49:03,058 | INFO     | transferring file log.45006595._022089.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6677473501/log.45006595._022089.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 07:49:22] 2025-06-03 22:49:03,058 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6677473501/log.45006595._022089.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._022089.job
[2025-06-04 07:49:22] 2025-06-03 22:49:03,069 | INFO     | adding to output.list: log.45006595._022089.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/da/log.45006595._022089.job.log.tg
[2025-06-04 07:49:22] 2025-06-03 22:49:03,070 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:49:22] 2025-06-03 22:49:03,070 | INFO     | summary of transferred files:
[2025-06-04 07:49:22] 2025-06-03 22:49:03,070 | INFO     |  -- lfn=log.45006595._022089.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:49:22] 2025-06-03 22:49:03,070 | INFO     | stage-out finished correctly
[2025-06-04 07:49:22] 2025-06-03 22:49:04,231 | INFO     | monitor loop #427: job 0:6677473501 is in state 'finished'
[2025-06-04 07:49:22] 2025-06-03 22:49:04,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:49:22] 2025-06-03 22:49:04,937 | INFO     | PID=3724923 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:49:22] 2025-06-03 22:49:04,937 | INFO     | .. there are 2 such processes running
[2025-06-04 07:49:22] 2025-06-03 22:49:05,964 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:49:22] 2025-06-03 22:49:06,734 | INFO     | monitor loop #428: job 0:6677473501 is in state 'finished'
[2025-06-04 07:49:22] 2025-06-03 22:49:06,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:49:22] 2025-06-03 22:49:08,264 | INFO     | job 6677473501 has state=finished
[2025-06-04 07:49:22] 2025-06-03 22:49:08,264 | INFO     | preparing for final server update for job 6677473501 in state='finished'
[2025-06-04 07:49:22] 2025-06-03 22:49:08,265 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:49:22] 2025-06-03 22:49:08,265 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:49:22] 2025-06-03 22:49:08,265 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:49:22] 2025-06-03 22:49:08,265 | INFO     | job 6677473501 has finished - writing final server update
[2025-06-04 07:49:22] 2025-06-03 22:49:08,265 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:49:22] 2025-06-03 22:49:08,267 | INFO     | executing command: lscpu
[2025-06-04 07:49:22] 2025-06-03 22:49:08,284 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:49:22] 2025-06-03 22:49:09,237 | INFO     | monitor loop #429: job 0:6677473501 is in state 'finished'
[2025-06-04 07:49:22] 2025-06-03 22:49:09,237 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:49:22] 2025-06-03 22:49:10,431 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:49:22] 2025-06-03 22:49:10,432 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6677473501/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:49:22] 2025-06-03 22:49:10,432 | INFO     | extracted standard info from prmon json
[2025-06-04 07:49:22] 2025-06-03 22:49:10,432 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:49:22] 2025-06-03 22:49:10,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:49:22] 2025-06-03 22:49:10,433 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:49:22] 2025-06-03 22:49:10,433 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:49:22] 2025-06-03 22:49:10,434 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:49:22] 2025-06-03 22:49:10,434 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 07:49:22] 2025-06-03 22:49:10,435 | INFO     | sum of deviations: 14775981932.000013
[2025-06-04 07:49:22] 2025-06-03 22:49:10,435 | INFO     | mean x: 1748988183.5
[2025-06-04 07:49:22] 2025-06-03 22:49:10,435 | INFO     | mean y: 2410578.88372093
[2025-06-04 07:49:22] 2025-06-03 22:49:10,435 | INFO     | -- intersect: -131044918281.05067
[2025-06-04 07:49:22] 2025-06-03 22:49:10,435 | INFO     | intersect: -131044918281.05067
[2025-06-04 07:49:22] 2025-06-03 22:49:10,435 | INFO     | chi2: 1.853835577129025
[2025-06-04 07:49:22] 2025-06-03 22:49:10,435 | INFO     | -- intersect: -131044918281.05067
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | current memory leak: 74.93 B/s (using 86 data points, chi2=1.85)
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | ..............................
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . Timing measurements:
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . get job = 0 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . initial setup = 5 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . payload setup = 3 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . stage-in = 0 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . payload execution = 5654 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . stage-out = 0 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | . log creation = 0 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,436 | INFO     | ..............................
[2025-06-04 07:49:22] 2025-06-03 22:49:10,795 | INFO     | 
[2025-06-04 07:49:22] 2025-06-03 22:49:10,795 | INFO     | job summary report
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | --------------------------------------------------
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | PanDA job id: 6677473501
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | task id: 45006595
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | errors: (none)
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | pilot state: finished 
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | transexitcode: 0
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | exeerrorcode: 0
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | exeerrordiag: 
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | exitcode: 0
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | exitmsg: OK
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | cpuconsumptiontime: 29202 s
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | nevents: 400
[2025-06-04 07:49:22] 2025-06-03 22:49:10,796 | INFO     | neventsw: 0
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | pid: 3731505
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | pgrp: 3731505
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | corecount: 6
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | event service: False
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | sizes: {0: 2404955, 1: 2405210, 3: 2405416, 11: 2405444, 5661: 2432024, 5663: 2440965, 5666: 2441149, 5670: 2441319}
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | --------------------------------------------------
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | 
[2025-06-04 07:49:22] 2025-06-03 22:49:10,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | job 6677473501 has completed (purged errors)
[2025-06-04 07:49:22] 2025-06-03 22:49:10,810 | INFO     | overall cleanup function is called
[2025-06-04 07:49:22] 2025-06-03 22:49:11,816 | INFO     | --- collectZombieJob: --- 10, [3731505]
[2025-06-04 07:49:22] 2025-06-03 22:49:11,816 | INFO     | zombie collector waiting for pid 3731505
[2025-06-04 07:49:22] 2025-06-03 22:49:11,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:49:22] 2025-06-03 22:49:11,816 | INFO     | collected zombie processes
[2025-06-04 07:49:22] 2025-06-03 22:49:11,816 | INFO     | will attempt to kill all subprocesses of pid=3731505
[2025-06-04 07:49:22] 2025-06-03 22:49:11,901 | INFO     | process IDs to be killed: [3731505] (in reverse order)
[2025-06-04 07:49:22] 2025-06-03 22:49:11,931 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:49:22] 2025-06-03 22:49:11,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:49:22] 2025-06-03 22:49:11,934 | INFO     | did not find any defunct processes belonging to 3731505
[2025-06-04 07:49:22] 2025-06-03 22:49:11,937 | INFO     | did not find any defunct processes belonging to 3731505
[2025-06-04 07:49:22] 2025-06-03 22:49:11,937 | INFO     | ready for new job
[2025-06-04 07:49:22] 2025-06-03 22:49:11,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:49:22] 2025-06-03 22:49:11,938 | INFO     | **************************************
[2025-06-04 07:49:22] 2025-06-03 22:49:11,938 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:49:22] 2025-06-03 22:49:11,938 | INFO     | **************************************
[2025-06-04 07:49:22] 2025-06-03 22:49:11,938 | INFO     | 
[2025-06-04 07:49:22] 2025-06-03 22:49:11,939 | INFO     | architecture information:
[2025-06-04 07:49:22] 2025-06-03 22:49:11,941 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:49:22] 2025-06-03 22:49:11,950 | INFO     | cat /etc/os-release:
[2025-06-04 07:49:22] NAME="CentOS Linux"
[2025-06-04 07:49:22] VERSION="7 (Core)"
[2025-06-04 07:49:22] ID="centos"
[2025-06-04 07:49:22] ID_LIKE="rhel fedora"
[2025-06-04 07:49:22] VERSION_ID="7"
[2025-06-04 07:49:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:49:22] ANSI_COLOR="0;31"
[2025-06-04 07:49:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:49:22] HOME_URL="https://www.centos.org/"
[2025-06-04 07:49:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:49:22] 
[2025-06-04 07:49:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:49:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:49:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:49:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:49:22] 
[2025-06-04 07:49:22] 2025-06-03 22:49:11,950 | INFO     | **************************************
[2025-06-04 07:49:22] 2025-06-03 22:49:12,453 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 07:49:22] 2025-06-03 22:49:12,463 | INFO     | sufficient remaining disk space (107129864192 B)
[2025-06-04 07:49:22] 2025-06-03 22:49:12,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:49:22] 2025-06-03 22:49:12,463 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:49:22] 2025-06-03 22:49:12,463 | INFO     | update_server=False
[2025-06-04 07:49:22] 2025-06-03 22:49:12,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:49:22] 2025-06-03 22:49:12,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:49:22] 2025-06-03 22:49:12,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:49:22] 2025-06-03 22:49:12,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:49:22] 2025-06-03 22:49:12,745 | INFO     | aborting loop
[2025-06-04 07:49:22] 2025-06-03 22:49:12,937 | INFO     | all payload control threads have been joined
[2025-06-04 07:49:22] 2025-06-03 22:49:12,958 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:49:22] 2025-06-03 22:49:12,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:49:22] 2025-06-03 22:49:12,958 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:49:22] 2025-06-03 22:49:13,095 | INFO     | all job control threads have been joined
[2025-06-04 07:49:22] 2025-06-03 22:49:13,324 | INFO     | all data control threads have been joined
[2025-06-04 07:49:22] 2025-06-03 22:49:13,465 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:13,468 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:13,474 | INFO     | [job] validate thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:13,632 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:13,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:49:22] 2025-06-03 22:49:13,661 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:13,746 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:13,750 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:13,942 | INFO     | [payload] control thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:14,100 | INFO     | [job] control thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:14,195 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:14,329 | INFO     | [data] control thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:14,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:14,675 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:14,740 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:15,661 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:16,469 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:49:22] 2025-06-03 22:49:17,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742012319552)>', '<ExcThread(monitor, started 139741383091968)>']
[2025-06-04 07:49:22] 2025-06-03 22:49:17,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:49:22] 2025-06-03 22:49:17,983 | INFO     | [monitor] control thread has ended
[2025-06-04 07:49:22] 2025-06-03 22:49:22,319 | INFO     | all workflow threads have been joined
[2025-06-04 07:49:22] 2025-06-03 22:49:22,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:49:22] 2025-06-03 22:49:22,319 | INFO     | traces error code: 0
[2025-06-04 07:49:22] 2025-06-03 22:49:22,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:49:22] 2025-06-03 22:49:22,390 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:49:22] 2025-06-03 22:49:22,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:49:22] 2025-06-03 22:49:22,392 [wrapper] pilotpid: 3724923
[2025-06-04 07:49:22] 2025-06-03 22:49:22,394 [wrapper] Pilot exit status: 0
[2025-06-04 07:49:22] 2025-06-03 22:49:22,399 [wrapper] pandaids: 6677473501
[2025-06-04 07:49:22] 2025-06-03 22:49:22,418 [wrapper] cleanup supervisor_pilot 3769651 3724924
[2025-06-04 07:49:22] 2025-06-03 22:49:22,420 [wrapper] Test setup, not cleaning
[2025-06-04 07:49:22] 2025-06-03 22:49:22,421 [wrapper] apfmon messages muted
[2025-06-04 07:49:22] 2025-06-03 22:49:22,422 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:49:22] 2025-06-03 22:49:22,424 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:49:22]  *** Error codes and diagnostics ***
[2025-06-04 07:49:22]     "exeErrorCode": 0,
[2025-06-04 07:49:22]     "exeErrorDiag": "",
[2025-06-04 07:49:22]     "pilotErrorCode": 0,
[2025-06-04 07:49:22]     "pilotErrorDiag": "",
[2025-06-04 07:49:22]  *** Listing of results directory ***
[2025-06-04 07:49:22] total 384088
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc    495897 Jun  3 15:16 pilot3.tar.gz
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:24 queuedata.json
[2025-06-04 07:49:22] -rwx------. 1 boinc boinc     37140 Jun  3 15:24 runpilot2-wrapper.sh
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:49:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:14 run_atlas
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:14 job.xml
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc      9345 Jun  4 06:14 init_data.xml
[2025-06-04 07:49:22] -rw-r--r--. 2 boinc boinc 215436079 Jun  4 06:14 EVNT.45006593._000884.pool.root.1
[2025-06-04 07:49:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:14 start_atlas.sh
[2025-06-04 07:49:22] drwxrwx--x. 2 boinc boinc        68 Jun  4 06:14 shared
[2025-06-04 07:49:22] -rw-r--r--. 2 boinc boinc    508878 Jun  4 06:14 input.tar.gz
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:14 boinc_lockfile
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc      2524 Jun  4 06:14 pandaJob.out
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc    986853 Jun  4 06:14 agis_schedconf.cvmfs.json
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc   1603667 Jun  4 06:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:49:22] drwx------. 4 boinc boinc      4096 Jun  4 06:14 pilot3
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc 172366401 Jun  4 07:48 HITS.45006595._022089.pool.root.1
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc      1021 Jun  4 07:48 memory_monitor_summary.json
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc        27 Jun  4 07:49 wrapper_checkpoint.txt
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc      8192 Jun  4 07:49 boinc_mmap_file
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc    280461 Jun  4 07:49 log.45006595._022089.job.log.tgz.1
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc       529 Jun  4 07:49 boinc_task_state.xml
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc        95 Jun  4 07:49 pilot_heartbeat.json
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc      7666 Jun  4 07:49 heartbeat.json
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc      4354 Jun  4 07:49 pilotlog.txt
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc    557471 Jun  4 07:49 log.45006595._022089.job.log.1
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc       357 Jun  4 07:49 output.list
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc       620 Jun  4 07:49 runtime_log
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc    860160 Jun  4 07:49 result.tar.gz
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc       639 Jun  4 07:49 VjiKDmVFag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuaXKDmB4Pctn.diag
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc      8607 Jun  4 07:49 runtime_log.err
[2025-06-04 07:49:22] -rw-r--r--. 1 boinc boinc     21514 Jun  4 07:49 stderr.txt
[2025-06-04 07:49:22] HITS file was successfully produced:
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc 172366401 Jun  4 07:48 shared/HITS.pool.root.1
[2025-06-04 07:49:22]  *** Contents of shared directory: ***
[2025-06-04 07:49:22] total 380072
[2025-06-04 07:49:22] -rw-r--r--. 2 boinc boinc 215436079 Jun  4 06:14 ATLAS.root_0
[2025-06-04 07:49:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:14 start_atlas.sh
[2025-06-04 07:49:22] -rw-r--r--. 2 boinc boinc    508878 Jun  4 06:14 input.tar.gz
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc 172366401 Jun  4 07:48 HITS.pool.root.1
[2025-06-04 07:49:22] -rw-------. 1 boinc boinc    860160 Jun  4 07:49 result.tar.gz
07:49:23 (3721189): run_atlas exited; CPU time 29274.232388
07:49:23 (3721189): called boinc_finish(0)

</stderr_txt>
]]>

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