Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:29 (28047): wrapper (7.7.26015): starting
18:29:29 (28047): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 18:29:29] Arguments: --nthreads 8
[2025-06-03 18:29:29] Threads: 8
[2025-06-03 18:29:29] Checking for CVMFS
[2025-06-03 18:29:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:29:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:29:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:29:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:29:32] 2.11.2.0 25755 32191 99312 146746 2 258 16831395 25165825 3539 130560 0 17709645 99.797 17545128 2327 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 18:29:32] CVMFS is ok
[2025-06-03 18:29:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:29:32] Checking for apptainer binary...
[2025-06-03 18:29:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 18:29:32] Running /usr/bin/apptainer --version
[2025-06-03 18:29:32] apptainer version 1.3.2-1.el7
[2025-06-03 18:29:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:30:54] cg-vwn458.simple-grid.lan
[2025-06-03 18:30:54] apptainer works
[2025-06-03 18:30:54] Set ATHENA_PROC_NUMBER=8
[2025-06-03 18:30:54] Set ATHENA_CORE_NUMBER=8
[2025-06-03 18:30:54] Starting ATLAS job with PandaID=6677458336
[2025-06-03 18:30:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:18:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:18:11] 2025-06-03 20:16:19,076 | INFO     | monitor loop #963: job 0:6677458336 is in state 'finished'
[2025-06-03 22:18:11] 2025-06-03 20:16:19,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:18:11] 2025-06-03 20:16:21,581 | INFO     | monitor loop #964: job 0:6677458336 is in state 'finished'
[2025-06-03 22:18:11] 2025-06-03 20:16:21,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:18:11] 2025-06-03 20:16:23,970 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 22:18:11] 2025-06-03 20:16:23,971 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6677458336/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:18:11] 2025-06-03 20:16:23,971 | INFO     | extracted standard info from prmon json
[2025-06-03 22:18:11] 2025-06-03 20:16:23,971 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:18:11] 2025-06-03 20:16:23,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:18:11] 2025-06-03 20:16:23,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:18:11] 2025-06-03 20:16:23,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:18:11] 2025-06-03 20:16:23,976 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:18:11] 2025-06-03 20:16:23,977 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 22:18:11] 2025-06-03 20:16:23,979 | INFO     | sum of deviations: -35241556199.49999
[2025-06-03 22:18:11] 2025-06-03 20:16:23,979 | INFO     | mean x: 1748975139.5
[2025-06-03 22:18:11] 2025-06-03 20:16:23,979 | INFO     | mean y: 2557228.238317757
[2025-06-03 22:18:11] 2025-06-03 20:16:23,979 | INFO     | -- intersect: 20285382687.475513
[2025-06-03 22:18:11] 2025-06-03 20:16:23,979 | INFO     | intersect: 20285382687.475513
[2025-06-03 22:18:11] 2025-06-03 20:16:23,979 | INFO     | chi2: 1.7927455624943827
[2025-06-03 22:18:11] 2025-06-03 20:16:23,980 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,982 | INFO     | sum of deviations: -33523359104.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,982 | INFO     | mean x: 1748974987.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,982 | INFO     | mean y: 2558487.851674641
[2025-06-03 22:18:11] 2025-06-03 20:16:23,982 | INFO     | -- intersect: 20714641971.884415
[2025-06-03 22:18:11] 2025-06-03 20:16:23,982 | INFO     | intersect: 20714641971.884415
[2025-06-03 22:18:11] 2025-06-03 20:16:23,982 | INFO     | chi2: 1.7910478080248928
[2025-06-03 22:18:11] 2025-06-03 20:16:23,983 | INFO     | current chi2=1.7910478080248928 (change=0.09470136225731984 %)
[2025-06-03 22:18:11] 2025-06-03 20:16:23,983 | INFO     | right removable region: 208
[2025-06-03 22:18:11] 2025-06-03 20:16:23,983 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,985 | INFO     | sum of deviations: -70239101724.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,985 | INFO     | mean x: 1748975292.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,985 | INFO     | mean y: 2582629.023923445
[2025-06-03 22:18:11] 2025-06-03 20:16:23,985 | INFO     | -- intersect: 43399140472.07431
[2025-06-03 22:18:11] 2025-06-03 20:16:23,985 | INFO     | intersect: 43399140472.07431
[2025-06-03 22:18:11] 2025-06-03 20:16:23,986 | INFO     | chi2: 0.22247020050085248
[2025-06-03 22:18:11] 2025-06-03 20:16:23,986 | INFO     | current chi2=0.22247020050085248 (change=87.59053124129267 %)
[2025-06-03 22:18:11] 2025-06-03 20:16:23,986 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,988 | INFO     | sum of deviations: -70095171247.99998
[2025-06-03 22:18:11] 2025-06-03 20:16:23,988 | INFO     | mean x: 1748975444.5
[2025-06-03 22:18:11] 2025-06-03 20:16:23,988 | INFO     | mean y: 2582476.862745098
[2025-06-03 22:18:11] 2025-06-03 20:16:23,988 | INFO     | -- intersect: 46573342201.44626
[2025-06-03 22:18:11] 2025-06-03 20:16:23,988 | INFO     | intersect: 46573342201.44626
[2025-06-03 22:18:11] 2025-06-03 20:16:23,988 | INFO     | chi2: 0.19322923042370627
[2025-06-03 22:18:11] 2025-06-03 20:16:23,988 | INFO     | current chi2=0.19322923042370627 (change=13.143769372848729 %)
[2025-06-03 22:18:11] 2025-06-03 20:16:23,989 | INFO     | left removable region: 20
[2025-06-03 22:18:11] 2025-06-03 20:16:23,989 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,990 | INFO     | sum of deviations: -56765221400.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,991 | INFO     | mean x: 1748975566.5
[2025-06-03 22:18:11] 2025-06-03 20:16:23,991 | INFO     | mean y: 2575640.0
[2025-06-03 22:18:11] 2025-06-03 20:16:23,991 | INFO     | -- intersect: 48189187898.3296
[2025-06-03 22:18:11] 2025-06-03 20:16:23,991 | INFO     | intersect: 48189187898.3296
[2025-06-03 22:18:11] 2025-06-03 20:16:23,991 | INFO     | chi2: 0.18556192023408574
[2025-06-03 22:18:11] 2025-06-03 20:16:23,991 | INFO     | -- intersect: 48189187898.3296
[2025-06-03 22:18:11] 2025-06-03 20:16:23,991 | INFO     | current memory leak: -27.55 B/s (using 188 data points, chi2=0.19)
[2025-06-03 22:18:11] 2025-06-03 20:16:23,992 | INFO     | ..............................
[2025-06-03 22:18:11] 2025-06-03 20:16:23,992 | INFO     | . Timing measurements:
[2025-06-03 22:18:11] 2025-06-03 20:16:23,992 | INFO     | . get job = 0 s
[2025-06-03 22:18:11] 2025-06-03 20:16:23,992 | INFO     | . initial setup = 8 s
[2025-06-03 22:18:11] 2025-06-03 20:16:23,992 | INFO     | . payload setup = 32 s
[2025-06-03 22:18:11] 2025-06-03 20:16:23,993 | INFO     | . stage-in = 0 s
[2025-06-03 22:18:11] 2025-06-03 20:16:23,993 | INFO     | . payload execution = 13067 s
[2025-06-03 22:18:11] 2025-06-03 20:16:23,993 | INFO     | . stage-out = 2 s
[2025-06-03 22:18:11] 2025-06-03 20:16:23,993 | INFO     | . log creation = 0 s
[2025-06-03 22:18:11] 2025-06-03 20:16:23,993 | INFO     | ..............................
[2025-06-03 22:18:11] 2025-06-03 20:16:24,210 | INFO     | 
[2025-06-03 22:18:11] 2025-06-03 20:16:24,210 | INFO     | job summary report
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | --------------------------------------------------
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | PanDA job id: 6677458336
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | task id: 45006595
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | errors: (none)
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | pilot state: finished 
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | transexitcode: 0
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | exeerrorcode: 0
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | exeerrordiag: 
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | exitcode: 0
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | exitmsg: OK
[2025-06-03 22:18:11] 2025-06-03 20:16:24,211 | INFO     | cpuconsumptiontime: 48678 s
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | nevents: 400
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | neventsw: 0
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | pid: 13959
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | pgrp: 13959
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | corecount: 8
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | event service: False
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | sizes: {0: 2405183, 1: 2405183, 12: 2405211, 22: 2405239, 33: 2405267, 44: 2405323, 54: 2405479, 65: 2405507, 76: 2405535, 81: 2405797, 87: 2405825, 13104: 2435620
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | --------------------------------------------------
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | 
[2025-06-03 22:18:11] 2025-06-03 20:16:24,212 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-03 22:18:11] 2025-06-03 20:16:24,818 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,818 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,818 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | job 6677458336 has completed (purged errors)
[2025-06-03 22:18:11] 2025-06-03 20:16:24,820 | INFO     | overall cleanup function is called
[2025-06-03 22:18:11] 2025-06-03 20:16:25,829 | INFO     | --- collectZombieJob: --- 10, [13959]
[2025-06-03 22:18:11] 2025-06-03 20:16:25,829 | INFO     | zombie collector waiting for pid 13959
[2025-06-03 22:18:11] 2025-06-03 20:16:25,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:18:11] 2025-06-03 20:16:25,830 | INFO     | collected zombie processes
[2025-06-03 22:18:11] 2025-06-03 20:16:25,830 | INFO     | will attempt to kill all subprocesses of pid=13959
[2025-06-03 22:18:11] 2025-06-03 20:16:25,968 | INFO     | process IDs to be killed: [13959] (in reverse order)
[2025-06-03 22:18:11] 2025-06-03 20:16:26,868 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:18:11] 2025-06-03 20:16:26,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:18:11] 2025-06-03 20:16:26,877 | INFO     | did not find any defunct processes belonging to 13959
[2025-06-03 22:18:11] 2025-06-03 20:16:26,881 | INFO     | did not find any defunct processes belonging to 13959
[2025-06-03 22:18:11] 2025-06-03 20:16:26,881 | INFO     | ready for new job
[2025-06-03 22:18:11] 2025-06-03 20:16:26,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:18:11] 2025-06-03 20:16:26,890 | INFO     | **************************************
[2025-06-03 22:18:11] 2025-06-03 20:16:26,890 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:18:11] 2025-06-03 20:16:26,890 | INFO     | **************************************
[2025-06-03 22:18:11] 2025-06-03 20:16:26,890 | INFO     | 
[2025-06-03 22:18:11] 2025-06-03 20:16:26,891 | INFO     | pilot is running in a VM
[2025-06-03 22:18:11] 2025-06-03 20:16:26,891 | INFO     | architecture information:
[2025-06-03 22:18:11] 2025-06-03 20:16:26,912 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:18:11] 2025-06-03 20:16:26,987 | INFO     | PID=4244 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 22:18:11] 2025-06-03 20:16:26,988 | INFO     | .. there are 9 such processes running
[2025-06-03 22:18:11] 2025-06-03 20:16:27,108 | INFO     | cat /etc/os-release:
[2025-06-03 22:18:11] NAME="CentOS Linux"
[2025-06-03 22:18:11] VERSION="7 (Core)"
[2025-06-03 22:18:11] ID="centos"
[2025-06-03 22:18:11] ID_LIKE="rhel fedora"
[2025-06-03 22:18:11] VERSION_ID="7"
[2025-06-03 22:18:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:18:11] ANSI_COLOR="0;31"
[2025-06-03 22:18:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:18:11] HOME_URL="https://www.centos.org/"
[2025-06-03 22:18:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:18:11] 
[2025-06-03 22:18:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:18:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:18:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:18:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:18:11] 
[2025-06-03 22:18:11] 2025-06-03 20:16:27,108 | INFO     | **************************************
[2025-06-03 22:18:11] 2025-06-03 20:16:27,611 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-03 22:18:11] 2025-06-03 20:16:27,895 | INFO     | sufficient remaining disk space (497124638720 B)
[2025-06-03 22:18:11] 2025-06-03 20:16:27,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:18:11] 2025-06-03 20:16:27,896 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:18:11] 2025-06-03 20:16:27,896 | INFO     | update_server=False
[2025-06-03 22:18:11] 2025-06-03 20:16:27,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:18:11] 2025-06-03 20:16:27,897 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 22:18:11] 2025-06-03 20:16:27,897 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:18:11] 2025-06-03 20:16:27,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:18:11] 2025-06-03 20:16:27,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:18:11] 2025-06-03 20:16:27,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:18:11] 2025-06-03 20:16:27,900 | INFO     | aborting loop
[2025-06-03 22:18:11] 2025-06-03 20:16:27,987 | INFO     | all job control threads have been joined
[2025-06-03 22:18:11] 2025-06-03 20:16:28,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:18:11] 2025-06-03 20:16:28,665 | INFO     | all data control threads have been joined
[2025-06-03 22:18:11] 2025-06-03 20:16:28,775 | INFO     | all payload control threads have been joined
[2025-06-03 22:18:11] 2025-06-03 20:16:28,902 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:28,905 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:28,993 | INFO     | [job] control thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,079 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:18:11] 2025-06-03 20:16:29,334 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,475 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,591 | INFO     | [job] validate thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,603 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,674 | INFO     | [data] control thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,704 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,781 | INFO     | [payload] control thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:29,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:18:11] 2025-06-03 20:16:29,962 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:30,019 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:30,178 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:33,937 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:18:11] 2025-06-03 20:16:35,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641142675264)>', '<ExcThread(monitor, started 140640574760704)>']
[2025-06-03 22:18:11] 2025-06-03 20:16:35,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:18:11] 2025-06-03 20:16:35,945 | INFO     | [monitor] control thread has ended
[2025-06-03 22:18:11] 2025-06-03 20:16:40,033 | INFO     | all workflow threads have been joined
[2025-06-03 22:18:11] 2025-06-03 20:16:40,033 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:18:11] 2025-06-03 20:16:40,034 | INFO     | traces error code: 0
[2025-06-03 22:18:11] 2025-06-03 20:16:40,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:18:11] 2025-06-03 20:16:40,333 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:18:11] 2025-06-03 20:16:40,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:18:11] 2025-06-03 20:16:40,544 [wrapper] pilotpid: 4244
[2025-06-03 22:18:11] 2025-06-03 20:16:40,600 [wrapper] Pilot exit status: 0
[2025-06-03 22:18:11] 2025-06-03 20:16:40,924 [wrapper] pandaids: 6677458336
[2025-06-03 22:18:11] 2025-06-03 20:16:41,072 [wrapper] cleanup supervisor_pilot 24064 4245
[2025-06-03 22:18:11] 2025-06-03 20:16:41,148 [wrapper] Test setup, not cleaning
[2025-06-03 22:18:11] 2025-06-03 20:16:41,223 [wrapper] apfmon messages muted
[2025-06-03 22:18:11] 2025-06-03 20:16:41,295 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:18:11] 2025-06-03 20:16:41,415 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:18:11]  *** Error codes and diagnostics ***
[2025-06-03 22:18:11]     "exeErrorCode": 0,
[2025-06-03 22:18:11]     "exeErrorDiag": "",
[2025-06-03 22:18:11]     "pilotErrorCode": 0,
[2025-06-03 22:18:11]     "pilotErrorDiag": "",
[2025-06-03 22:18:11]  *** Listing of results directory ***
[2025-06-03 22:18:11] total 400416
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:37 pilot3.tar.gz
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:39 queuedata.json
[2025-06-03 22:18:11] -rwx------. 1 boinc boinc     37140 Jun  3 06:41 runpilot2-wrapper.sh
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc       100 Jun  3 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:18:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 18:29 run_atlas
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc       105 Jun  3 18:29 job.xml
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc      6392 Jun  3 18:29 init_data.xml
[2025-06-03 22:18:11] -rw-r--r--. 2 boinc boinc 217197764 Jun  3 18:29 EVNT.45006593._000788.pool.root.1
[2025-06-03 22:18:11] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:29 start_atlas.sh
[2025-06-03 22:18:11] drwxrwx--x. 2 boinc boinc        68 Jun  3 18:29 shared
[2025-06-03 22:18:11] -rw-r--r--. 2 boinc boinc    508874 Jun  3 18:29 input.tar.gz
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc         0 Jun  3 18:29 boinc_lockfile
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc      2524 Jun  3 18:30 pandaJob.out
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc    982716 Jun  3 18:33 agis_schedconf.cvmfs.json
[2025-06-03 22:18:11] drwx------. 4 boinc boinc      4096 Jun  3 18:33 pilot3
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc 185917680 Jun  3 22:14 HITS.45006595._019695.pool.root.1
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc       531 Jun  3 22:14 boinc_task_state.xml
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc      1020 Jun  3 22:14 memory_monitor_summary.json
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc   1603667 Jun  3 22:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc    384857 Jun  3 22:14 log.45006595._019695.job.log.tgz.1
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc        95 Jun  3 22:16 pilot_heartbeat.json
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc      7693 Jun  3 22:16 heartbeat.json
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc      4931 Jun  3 22:16 pilotlog.txt
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc   1158240 Jun  3 22:16 log.45006595._019695.job.log.1
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc       357 Jun  3 22:16 output.list
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc       620 Jun  3 22:16 runtime_log
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc   1566720 Jun  3 22:16 result.tar.gz
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc      8673 Jun  3 22:16 runtime_log.err
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc       656 Jun  3 22:16 M8CNDmFeYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwzhKDm5ORPLo.diag
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc      8192 Jun  3 22:18 boinc_mmap_file
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc        28 Jun  3 22:18 wrapper_checkpoint.txt
[2025-06-03 22:18:11] -rw-r--r--. 1 boinc boinc     20849 Jun  3 22:18 stderr.txt
[2025-06-03 22:18:11] HITS file was successfully produced:
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc 185917680 Jun  3 22:14 shared/HITS.pool.root.1
[2025-06-03 22:18:11]  *** Contents of shared directory: ***
[2025-06-03 22:18:11] total 395720
[2025-06-03 22:18:11] -rw-r--r--. 2 boinc boinc 217197764 Jun  3 18:29 ATLAS.root_0
[2025-06-03 22:18:11] -rw-r--r--. 2 boinc boinc     15093 Jun  3 18:29 start_atlas.sh
[2025-06-03 22:18:11] -rw-r--r--. 2 boinc boinc    508874 Jun  3 18:29 input.tar.gz
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc 185917680 Jun  3 22:14 HITS.pool.root.1
[2025-06-03 22:18:11] -rw-------. 1 boinc boinc   1566720 Jun  3 22:16 result.tar.gz
22:18:12 (28047): run_atlas exited; CPU time 48841.726899
22:18:12 (28047): called boinc_finish(0)

</stderr_txt>
]]>

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