Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:46:25 (425289): wrapper (7.7.26015): starting
04:46:25 (425289): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:46:25] Arguments: --nthreads 8
[2025-06-03 04:46:25] Threads: 8
[2025-06-03 04:46:25] Checking for CVMFS
[2025-06-03 04:46:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:46:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:46:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:46:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:46:26] 2.12.6.0 1723263 21883 169336 146735 1 197 31941279 40960000 13969 16776704 0 281498984 99.759 172376386 37771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 04:46:26] CVMFS is ok
[2025-06-03 04:46:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 04:46:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 04:46:26] Further information can be found at the LHC@home message board.
[2025-06-03 04:46:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:46:26] Checking for apptainer binary...
[2025-06-03 04:46:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:46:26] Running /usr/bin/apptainer --version
[2025-06-03 04:46:26] apptainer version 1.4.1-1.el9
[2025-06-03 04:46:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:46:26] c8-16-2.aglt2.org
[2025-06-03 04:46:26] apptainer works
[2025-06-03 04:46:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:46:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:46:26] Starting ATLAS job with PandaID=6666121860
[2025-06-03 04:46:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:48:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:48:13]  is_altstaged=None
[2025-06-03 05:48:13]  is_tar=False
[2025-06-03 05:48:13]  lfn=log.44871837._055087.job.log.tgz.1
[2025-06-03 05:48:13]  mtime=0
[2025-06-03 05:48:13]  protocol_id=None
[2025-06-03 05:48:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 05:48:13]  replicas=None
[2025-06-03 05:48:13]  scope=mc23_13p6TeV
[2025-06-03 05:48:13]  status=None
[2025-06-03 05:48:13]  status_code=0
[2025-06-03 05:48:13]  storage_token=
[2025-06-03 05:48:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666121860/log.44871837._055087.job.log.tgz.1
[2025-06-03 05:48:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/e8/log.44871837._055087.job.log.tgz.1
[2025-06-03 05:48:13]  workdir=None
[2025-06-03 05:48:13] ]
[2025-06-03 05:48:13] 2025-06-03 09:47:46,663 | INFO     | transferring file log.44871837._055087.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666121860/log.44871837._055087.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 05:48:13] 2025-06-03 09:47:46,663 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666121860/log.44871837._055087.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._055087.job
[2025-06-03 05:48:13] 2025-06-03 09:47:46,681 | INFO     | adding to output.list: log.44871837._055087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/e8/log.44871837._055087.job.log.tg
[2025-06-03 05:48:13] 2025-06-03 09:47:46,681 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 05:48:13] 2025-06-03 09:47:46,681 | INFO     | summary of transferred files:
[2025-06-03 05:48:13] 2025-06-03 09:47:46,681 | INFO     |  -- lfn=log.44871837._055087.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 05:48:13] 2025-06-03 09:47:46,681 | INFO     | stage-out finished correctly
[2025-06-03 05:48:13] 2025-06-03 09:47:47,012 | INFO     | PID=435781 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 05:48:13] 2025-06-03 09:47:47,012 | INFO     | .. there are 17 such processes running
[2025-06-03 05:48:13] 2025-06-03 09:47:47,137 | INFO     | monitor loop #268: job 0:6666121860 is in state 'finished'
[2025-06-03 05:48:13] 2025-06-03 09:47:47,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:48:13] 2025-06-03 09:47:48,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 05:48:13] 2025-06-03 09:47:49,641 | INFO     | monitor loop #269: job 0:6666121860 is in state 'finished'
[2025-06-03 05:48:13] 2025-06-03 09:47:49,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:48:13] 2025-06-03 09:47:51,225 | INFO     | job 6666121860 has state=finished
[2025-06-03 05:48:13] 2025-06-03 09:47:51,225 | INFO     | preparing for final server update for job 6666121860 in state='finished'
[2025-06-03 05:48:13] 2025-06-03 09:47:51,225 | INFO     | this job has now completed (state=finished)
[2025-06-03 05:48:13] 2025-06-03 09:47:51,226 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 05:48:13] 2025-06-03 09:47:51,226 | INFO     | log transfer has been attempted: DONE
[2025-06-03 05:48:13] 2025-06-03 09:47:51,226 | INFO     | job 6666121860 has finished - writing final server update
[2025-06-03 05:48:13] 2025-06-03 09:47:51,226 | INFO     | total number of processed events: 400 (read)
[2025-06-03 05:48:13] 2025-06-03 09:47:51,243 | INFO     | executing command: lscpu
[2025-06-03 05:48:13] 2025-06-03 09:47:51,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 05:48:13] 2025-06-03 09:47:52,144 | INFO     | monitor loop #270: job 0:6666121860 is in state 'finished'
[2025-06-03 05:48:13] 2025-06-03 09:47:52,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 05:48:13] 2025-06-03 09:47:54,382 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 05:48:13] 2025-06-03 09:47:54,383 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666121860/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 05:48:13] 2025-06-03 09:47:54,383 | INFO     | extracted standard info from prmon json
[2025-06-03 05:48:13] 2025-06-03 09:47:54,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 05:48:13] 2025-06-03 09:47:54,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:48:13] 2025-06-03 09:47:54,383 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:48:13] 2025-06-03 09:47:54,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:48:13] 2025-06-03 09:47:54,384 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:48:13] 2025-06-03 09:47:54,384 | INFO     | sum of square deviations: 46147842.0
[2025-06-03 05:48:13] 2025-06-03 09:47:54,384 | INFO     | sum of deviations: 6306180305.000001
[2025-06-03 05:48:13] 2025-06-03 09:47:54,384 | INFO     | mean x: 1748942311.0
[2025-06-03 05:48:13] 2025-06-03 09:47:54,384 | INFO     | mean y: 2124683.566037736
[2025-06-03 05:48:13] 2025-06-03 09:47:54,384 | INFO     | -- intersect: -238993786679.07983
[2025-06-03 05:48:13] 2025-06-03 09:47:54,384 | INFO     | intersect: -238993786679.07983
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | chi2: 0.8323269532502916
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | -- intersect: -238993786679.07983
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | current memory leak: 136.65 B/s (using 53 data points, chi2=0.83)
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | ..............................
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . Timing measurements:
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . get job = 0 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . initial setup = 2 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . payload setup = 5 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . stage-in = 0 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . payload execution = 3647 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . stage-out = 0 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | . log creation = 0 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,385 | INFO     | ..............................
[2025-06-03 05:48:13] 2025-06-03 09:47:54,417 | INFO     | 
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | job summary report
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | --------------------------------------------------
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | PanDA job id: 6666121860
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | task id: 44871837
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | errors: (none)
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | pilot state: finished 
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | transexitcode: 0
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | exeerrorcode: 0
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | exeerrordiag: 
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | exitcode: 0
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | exitmsg: OK
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | cpuconsumptiontime: 24736 s
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | nevents: 400
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | neventsw: 0
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | pid: 447956
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | pgrp: 447956
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | corecount: 8
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | event service: False
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | sizes: {0: 2404405, 1: 2405261, 5: 2405467, 11: 2405523, 3656: 2431215, 3657: 2440156, 3658: 2440340, 3664: 2440510}
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | --------------------------------------------------
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | 
[2025-06-03 05:48:13] 2025-06-03 09:47:54,418 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 05:48:13] 2025-06-03 09:47:54,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:48:13] 2025-06-03 09:47:54,435 | INFO     | job 6666121860 has completed (purged errors)
[2025-06-03 05:48:13] 2025-06-03 09:47:54,436 | INFO     | overall cleanup function is called
[2025-06-03 05:48:13] 2025-06-03 09:47:55,443 | INFO     | --- collectZombieJob: --- 10, [447956]
[2025-06-03 05:48:13] 2025-06-03 09:47:55,443 | INFO     | zombie collector waiting for pid 447956
[2025-06-03 05:48:13] 2025-06-03 09:47:55,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:48:13] 2025-06-03 09:47:55,443 | INFO     | collected zombie processes
[2025-06-03 05:48:13] 2025-06-03 09:47:55,444 | INFO     | will attempt to kill all subprocesses of pid=447956
[2025-06-03 05:48:13] 2025-06-03 09:47:55,829 | INFO     | process IDs to be killed: [447956] (in reverse order)
[2025-06-03 05:48:13] 2025-06-03 09:47:55,976 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:48:13] 2025-06-03 09:47:55,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:48:13] 2025-06-03 09:47:55,995 | INFO     | did not find any defunct processes belonging to 447956
[2025-06-03 05:48:13] 2025-06-03 09:47:56,011 | INFO     | did not find any defunct processes belonging to 447956
[2025-06-03 05:48:13] 2025-06-03 09:47:56,011 | INFO     | ready for new job
[2025-06-03 05:48:13] 2025-06-03 09:47:56,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:48:13] 2025-06-03 09:47:56,012 | INFO     | **************************************
[2025-06-03 05:48:13] 2025-06-03 09:47:56,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:48:13] 2025-06-03 09:47:56,012 | INFO     | **************************************
[2025-06-03 05:48:13] 2025-06-03 09:47:56,012 | INFO     | 
[2025-06-03 05:48:13] 2025-06-03 09:47:56,029 | INFO     | architecture information:
[2025-06-03 05:48:13] 2025-06-03 09:47:56,029 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:48:13] 2025-06-03 09:47:56,041 | INFO     | cat /etc/os-release:
[2025-06-03 05:48:13] NAME="CentOS Linux"
[2025-06-03 05:48:13] VERSION="7 (Core)"
[2025-06-03 05:48:13] ID="centos"
[2025-06-03 05:48:13] ID_LIKE="rhel fedora"
[2025-06-03 05:48:13] VERSION_ID="7"
[2025-06-03 05:48:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:48:13] ANSI_COLOR="0;31"
[2025-06-03 05:48:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:48:13] HOME_URL="https://www.centos.org/"
[2025-06-03 05:48:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:48:13] 
[2025-06-03 05:48:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:48:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:48:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:48:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:48:13] 
[2025-06-03 05:48:13] 2025-06-03 09:47:56,041 | INFO     | **************************************
[2025-06-03 05:48:13] 2025-06-03 09:47:56,544 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 05:48:13] 2025-06-03 09:47:56,559 | INFO     | sufficient remaining disk space (165381406720 B)
[2025-06-03 05:48:13] 2025-06-03 09:47:56,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:48:13] 2025-06-03 09:47:56,560 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:48:13] 2025-06-03 09:47:56,560 | INFO     | update_server=False
[2025-06-03 05:48:13] 2025-06-03 09:47:56,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:48:13] 2025-06-03 09:47:56,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:48:13] 2025-06-03 09:47:56,560 | INFO     | aborting loop
[2025-06-03 05:48:13] 2025-06-03 09:47:57,038 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:48:13] 2025-06-03 09:47:57,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:48:13] 2025-06-03 09:47:57,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:48:13] 2025-06-03 09:47:57,064 | INFO     | all data control threads have been joined
[2025-06-03 05:48:13] 2025-06-03 09:47:57,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:48:13] 2025-06-03 09:47:57,315 | INFO     | all payload control threads have been joined
[2025-06-03 05:48:13] 2025-06-03 09:47:57,366 | INFO     | all job control threads have been joined
[2025-06-03 05:48:13] 2025-06-03 09:47:57,565 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:57,566 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:57,630 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:57,666 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,070 | INFO     | [data] control thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,240 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,321 | INFO     | [payload] control thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,372 | INFO     | [job] control thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,436 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,570 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,613 | INFO     | [job] validate thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,619 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:58,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:48:13] 2025-06-03 09:47:59,235 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:47:59,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:48:13] 2025-06-03 09:48:00,433 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:48:02,756 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:48:07,127 | INFO     | job.realtimelogging is not enabled
[2025-06-03 05:48:13] 2025-06-03 09:48:08,132 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:48:13] 2025-06-03 09:48:08,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501464942400)>', '<ExcThread(monitor, started 140500820535040)>']
[2025-06-03 05:48:13] 2025-06-03 09:48:09,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:48:13] 2025-06-03 09:48:09,099 | INFO     | [monitor] control thread has ended
[2025-06-03 05:48:13] 2025-06-03 09:48:13,458 | INFO     | all workflow threads have been joined
[2025-06-03 05:48:13] 2025-06-03 09:48:13,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:48:13] 2025-06-03 09:48:13,459 | INFO     | traces error code: 0
[2025-06-03 05:48:13] 2025-06-03 09:48:13,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:48:13] 2025-06-03 09:48:13,550 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:48:13] 2025-06-03 09:48:13,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:48:13] 2025-06-03 09:48:13,555 [wrapper] pilotpid: 435781
[2025-06-03 05:48:13] 2025-06-03 09:48:13,557 [wrapper] Pilot exit status: 0
[2025-06-03 05:48:13] 2025-06-03 09:48:13,567 [wrapper] pandaids: 6666121860
[2025-06-03 05:48:13] 2025-06-03 09:48:13,670 [wrapper] cleanup supervisor_pilot 1402740 435782
[2025-06-03 05:48:13] 2025-06-03 09:48:13,674 [wrapper] Test setup, not cleaning
[2025-06-03 05:48:13] 2025-06-03 09:48:13,676 [wrapper] apfmon messages muted
[2025-06-03 05:48:13] 2025-06-03 09:48:13,678 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:48:13] 2025-06-03 09:48:13,680 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:48:13]  *** Error codes and diagnostics ***
[2025-06-03 05:48:13]     "exeErrorCode": 0,
[2025-06-03 05:48:13]     "exeErrorDiag": "",
[2025-06-03 05:48:13]     "pilotErrorCode": 0,
[2025-06-03 05:48:13]     "pilotErrorDiag": "",
[2025-06-03 05:48:13]  *** Listing of results directory ***
[2025-06-03 05:48:13] total 413108
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas    495897 May 26 14:09 pilot3.tar.gz
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas      5111 May 26 14:25 queuedata.json
[2025-06-03 05:48:13] -rwx------. 1 boincer umatlas     37140 May 26 14:26 runpilot2-wrapper.sh
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas       100 Jun  3 04:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:48:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 04:46 run_atlas
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas       105 Jun  3 04:46 job.xml
[2025-06-03 05:48:13] -rw-r--r--. 2 boincer umatlas 223860366 Jun  3 04:46 EVNT.44871834._002187.pool.root.1
[2025-06-03 05:48:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:46 start_atlas.sh
[2025-06-03 05:48:13] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 04:46 shared
[2025-06-03 05:48:13] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 04:46 input.tar.gz
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas         0 Jun  3 04:46 boinc_lockfile
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas      2558 Jun  3 04:46 pandaJob.out
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas    985498 Jun  3 04:46 agis_schedconf.cvmfs.json
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas   1603667 Jun  3 04:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:48:13] drwx------. 4 boincer umatlas      4096 Jun  3 04:46 pilot3
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas      7162 Jun  3 05:45 init_data.xml
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas 193981184 Jun  3 05:47 HITS.44871837._055087.pool.root.1
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas       529 Jun  3 05:47 boinc_task_state.xml
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas      1029 Jun  3 05:47 memory_monitor_summary.json
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas    302162 Jun  3 05:47 log.44871837._055087.job.log.tgz.1
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas        95 Jun  3 05:47 pilot_heartbeat.json
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas      7692 Jun  3 05:47 heartbeat.json
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas        27 Jun  3 05:48 wrapper_checkpoint.txt
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 05:48 boinc_mmap_file
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas      4426 Jun  3 05:48 pilotlog.txt
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas    370593 Jun  3 05:48 log.44871837._055087.job.log.1
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas       357 Jun  3 05:48 output.list
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas       620 Jun  3 05:48 runtime_log
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas    696320 Jun  3 05:48 result.tar.gz
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 05:48 runtime_log.err
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas       651 Jun  3 05:48 hn6KDmwhrd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1SXKDmV2idhm.diag
[2025-06-03 05:48:13] -rw-r--r--. 1 boincer umatlas     21470 Jun  3 05:48 stderr.txt
[2025-06-03 05:48:13] HITS file was successfully produced:
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas 193981184 Jun  3 05:47 shared/HITS.pool.root.1
[2025-06-03 05:48:13]  *** Contents of shared directory: ***
[2025-06-03 05:48:13] total 409252
[2025-06-03 05:48:13] -rw-r--r--. 2 boincer umatlas 223860366 Jun  3 04:46 ATLAS.root_0
[2025-06-03 05:48:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 04:46 start_atlas.sh
[2025-06-03 05:48:13] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 04:46 input.tar.gz
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas 193981184 Jun  3 05:47 HITS.pool.root.1
[2025-06-03 05:48:13] -rw-------. 1 boincer umatlas    696320 Jun  3 05:48 result.tar.gz
05:48:14 (425289): run_atlas exited; CPU time 24854.309580
05:48:14 (425289): called boinc_finish(0)

</stderr_txt>
]]>

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