Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:13:43 (17041): wrapper (7.7.26015): starting
16:13:43 (17041): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:13:43] Arguments: --nthreads 8
[2025-06-03 16:13:43] Threads: 8
[2025-06-03 16:13:43] Checking for CVMFS
[2025-06-03 16:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:13:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:13:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:13:46] 2.11.2.0 785 31867 93304 146743 3 112 15492529 25165825 4257 130560 0 16082158 99.789 19040632 2147 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 16:13:46] CVMFS is ok
[2025-06-03 16:13:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:13:46] Checking for apptainer binary...
[2025-06-03 16:13:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:13:46] Running /usr/bin/apptainer --version
[2025-06-03 16:13:46] apptainer version 1.3.2-1.el7
[2025-06-03 16:13:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:15:19] cg-vwn255.simple-grid.lan
[2025-06-03 16:15:19] apptainer works
[2025-06-03 16:15:19] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:15:19] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:15:19] Starting ATLAS job with PandaID=6677472586
[2025-06-03 16:15:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:04:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:04:26] 2025-06-03 18:28:53,190 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:04:26] 2025-06-03 18:28:53,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:04:26] 2025-06-03 18:28:53,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:04:26] 2025-06-03 18:28:53,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:04:26] 2025-06-03 18:28:53,196 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:04:26] 2025-06-03 18:28:53,197 | INFO     | sum of square deviations: 4127772278.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,199 | INFO     | sum of deviations: 40767144667.00002
[2025-06-03 21:04:26] 2025-06-03 18:28:53,199 | INFO     | mean x: 1748967975.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,199 | INFO     | mean y: 2478968.405063291
[2025-06-03 21:04:26] 2025-06-03 18:28:53,199 | INFO     | -- intersect: -17270865017.838715
[2025-06-03 21:04:26] 2025-06-03 18:28:53,199 | INFO     | intersect: -17270865017.838715
[2025-06-03 21:04:26] 2025-06-03 18:28:53,200 | INFO     | chi2: 5.3271625549698145
[2025-06-03 21:04:26] 2025-06-03 18:28:53,200 | INFO     | sum of square deviations: 3871990738.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,202 | INFO     | sum of deviations: 40019465532.000015
[2025-06-03 21:04:26] 2025-06-03 18:28:53,203 | INFO     | mean x: 1748967822.5
[2025-06-03 21:04:26] 2025-06-03 18:28:53,203 | INFO     | mean y: 2478524.353448276
[2025-06-03 21:04:26] 2025-06-03 18:28:53,203 | INFO     | -- intersect: -18074206629.41044
[2025-06-03 21:04:26] 2025-06-03 18:28:53,203 | INFO     | intersect: -18074206629.41044
[2025-06-03 21:04:26] 2025-06-03 18:28:53,203 | INFO     | chi2: 5.333429903172787
[2025-06-03 21:04:26] 2025-06-03 18:28:53,203 | INFO     | current chi2=5.333429903172787 (change=-0.11764890104818644 %)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,203 | INFO     | right removable region: 231
[2025-06-03 21:04:26] 2025-06-03 18:28:53,204 | INFO     | sum of square deviations: 3871990738.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,206 | INFO     | sum of deviations: -41282337917.999985
[2025-06-03 21:04:26] 2025-06-03 18:28:53,206 | INFO     | mean x: 1748968127.5
[2025-06-03 21:04:26] 2025-06-03 18:28:53,206 | INFO     | mean y: 2527837.896551724
[2025-06-03 21:04:26] 2025-06-03 18:28:53,206 | INFO     | -- intersect: 18649652310.24509
[2025-06-03 21:04:26] 2025-06-03 18:28:53,206 | INFO     | intersect: 18649652310.24509
[2025-06-03 21:04:26] 2025-06-03 18:28:53,207 | INFO     | chi2: 0.654929225456812
[2025-06-03 21:04:26] 2025-06-03 18:28:53,207 | INFO     | current chi2=0.654929225456812 (change=87.70585243647547 %)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,207 | INFO     | sum of square deviations: 3627000098.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,209 | INFO     | sum of deviations: -59309505780.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,209 | INFO     | mean x: 1748968280.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,209 | INFO     | mean y: 2538948.1365638766
[2025-06-03 21:04:26] 2025-06-03 18:28:53,210 | INFO     | -- intersect: 28602054114.649982
[2025-06-03 21:04:26] 2025-06-03 18:28:53,210 | INFO     | intersect: 28602054114.649982
[2025-06-03 21:04:26] 2025-06-03 18:28:53,210 | INFO     | chi2: 0.22042576908517392
[2025-06-03 21:04:26] 2025-06-03 18:28:53,210 | INFO     | current chi2=0.22042576908517392 (change=66.34357415773783 %)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,211 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 21:04:26] 2025-06-03 18:28:53,212 | INFO     | sum of deviations: -54203917898.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,213 | INFO     | mean x: 1748968432.5
[2025-06-03 21:04:26] 2025-06-03 18:28:53,213 | INFO     | mean y: 2535617.3423423423
[2025-06-03 21:04:26] 2025-06-03 18:28:53,213 | INFO     | -- intersect: 27946248767.944805
[2025-06-03 21:04:26] 2025-06-03 18:28:53,213 | INFO     | intersect: 27946248767.944805
[2025-06-03 21:04:26] 2025-06-03 18:28:53,213 | INFO     | chi2: 0.21835909359735498
[2025-06-03 21:04:26] 2025-06-03 18:28:53,213 | INFO     | current chi2=0.21835909359735498 (change=0.9375834306470607 %)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,213 | INFO     | left removable region: 30
[2025-06-03 21:04:26] 2025-06-03 18:28:53,214 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,215 | INFO     | sum of deviations: -31705317483.000008
[2025-06-03 21:04:26] 2025-06-03 18:28:53,215 | INFO     | mean x: 1748968707.0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,216 | INFO     | mean y: 2520740.6766169155
[2025-06-03 21:04:26] 2025-06-03 18:28:53,216 | INFO     | -- intersect: 22024598861.332825
[2025-06-03 21:04:26] 2025-06-03 18:28:53,216 | INFO     | intersect: 22024598861.332825
[2025-06-03 21:04:26] 2025-06-03 18:28:53,216 | INFO     | chi2: 0.179548648833577
[2025-06-03 21:04:26] 2025-06-03 18:28:53,216 | INFO     | -- intersect: 22024598861.332825
[2025-06-03 21:04:26] 2025-06-03 18:28:53,217 | INFO     | current memory leak: -12.59 B/s (using 201 data points, chi2=0.18)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,217 | INFO     | ..............................
[2025-06-03 21:04:26] 2025-06-03 18:28:53,217 | INFO     | . Timing measurements:
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | . get job = 0 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | . initial setup = 6 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | . payload setup = 135 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | . stage-in = 0 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | . payload execution = 14604 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | . stage-out = 3 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | . log creation = 1 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,218 | INFO     | ..............................
[2025-06-03 21:04:26] 2025-06-03 18:28:53,544 | INFO     | 
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | job summary report
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | --------------------------------------------------
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | PanDA job id: 6677472586
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | task id: 45006595
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | errors: (none)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | pilot state: finished 
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | transexitcode: 0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | exeerrorcode: 0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,545 | INFO     | exeerrordiag: 
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | exitcode: 0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | exitmsg: OK
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | cpuconsumptiontime: 52336 s
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | nevents: 400
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | neventsw: 0
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | pid: 31182
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | pgrp: 31182
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | corecount: 8
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | event service: False
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | sizes: {0: 2405182, 1: 2405182, 12: 2405210, 22: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 65: 2405506, 76: 2405534, 87: 2405590, 91: 2405824, 97: 2406132, 1
[2025-06-03 21:04:26] 2025-06-03 18:28:53,546 | INFO     | --------------------------------------------------
[2025-06-03 21:04:26] 2025-06-03 18:28:53,547 | INFO     | 
[2025-06-03 21:04:26] 2025-06-03 18:28:53,547 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 21:04:26] 2025-06-03 18:28:53,926 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,926 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,926 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,926 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,926 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:04:26] 2025-06-03 18:28:53,928 | INFO     | job 6677472586 has completed (purged errors)
[2025-06-03 21:04:26] 2025-06-03 18:28:53,928 | INFO     | overall cleanup function is called
[2025-06-03 21:04:26] 2025-06-03 18:28:54,845 | INFO     | PID=20770 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 21:04:26] 2025-06-03 18:28:54,845 | INFO     | .. there are 9 such processes running
[2025-06-03 21:04:26] 2025-06-03 18:28:54,937 | INFO     | --- collectZombieJob: --- 10, [31182]
[2025-06-03 21:04:26] 2025-06-03 18:28:54,938 | INFO     | zombie collector waiting for pid 31182
[2025-06-03 21:04:26] 2025-06-03 18:28:54,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:04:26] 2025-06-03 18:28:54,938 | INFO     | collected zombie processes
[2025-06-03 21:04:26] 2025-06-03 18:28:54,938 | INFO     | will attempt to kill all subprocesses of pid=31182
[2025-06-03 21:04:26] 2025-06-03 18:28:55,056 | INFO     | process IDs to be killed: [31182] (in reverse order)
[2025-06-03 21:04:26] 2025-06-03 18:28:55,689 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:04:26] 2025-06-03 18:28:55,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:04:26] 2025-06-03 18:28:55,693 | INFO     | did not find any defunct processes belonging to 31182
[2025-06-03 21:04:26] 2025-06-03 18:28:55,696 | INFO     | did not find any defunct processes belonging to 31182
[2025-06-03 21:04:26] 2025-06-03 18:28:55,696 | INFO     | ready for new job
[2025-06-03 21:04:26] 2025-06-03 18:28:55,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:04:26] 2025-06-03 18:28:55,698 | INFO     | **************************************
[2025-06-03 21:04:26] 2025-06-03 18:28:55,699 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:04:26] 2025-06-03 18:28:55,699 | INFO     | **************************************
[2025-06-03 21:04:26] 2025-06-03 18:28:55,699 | INFO     | 
[2025-06-03 21:04:26] 2025-06-03 18:28:55,700 | INFO     | pilot is running in a VM
[2025-06-03 21:04:26] 2025-06-03 18:28:55,700 | INFO     | architecture information:
[2025-06-03 21:04:26] 2025-06-03 18:28:55,700 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:04:26] 2025-06-03 18:28:55,950 | INFO     | cat /etc/os-release:
[2025-06-03 21:04:26] NAME="CentOS Linux"
[2025-06-03 21:04:26] VERSION="7 (Core)"
[2025-06-03 21:04:26] ID="centos"
[2025-06-03 21:04:26] ID_LIKE="rhel fedora"
[2025-06-03 21:04:26] VERSION_ID="7"
[2025-06-03 21:04:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:04:26] ANSI_COLOR="0;31"
[2025-06-03 21:04:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:04:26] HOME_URL="https://www.centos.org/"
[2025-06-03 21:04:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:04:26] 
[2025-06-03 21:04:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:04:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:04:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:04:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:04:26] 
[2025-06-03 21:04:26] 2025-06-03 18:28:55,951 | INFO     | **************************************
[2025-06-03 21:04:26] 2025-06-03 18:28:56,455 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 21:04:26] 2025-06-03 18:28:56,623 | INFO     | sufficient remaining disk space (496691576832 B)
[2025-06-03 21:04:26] 2025-06-03 18:28:56,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:04:26] 2025-06-03 18:28:56,624 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:04:26] 2025-06-03 18:28:56,624 | INFO     | update_server=False
[2025-06-03 21:04:26] 2025-06-03 18:28:56,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:04:26] 2025-06-03 18:28:56,856 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:04:26] 2025-06-03 18:28:56,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:04:26] 2025-06-03 18:28:56,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:04:26] 2025-06-03 18:28:56,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:04:26] 2025-06-03 18:28:56,941 | INFO     | aborting loop
[2025-06-03 21:04:26] 2025-06-03 18:28:57,390 | INFO     | all data control threads have been joined
[2025-06-03 21:04:26] 2025-06-03 18:28:57,484 | INFO     | all payload control threads have been joined
[2025-06-03 21:04:26] 2025-06-03 18:28:57,631 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:57,680 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:57,799 | INFO     | all job control threads have been joined
[2025-06-03 21:04:26] 2025-06-03 18:28:57,812 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:57,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:04:26] 2025-06-03 18:28:57,946 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:58,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:04:26] 2025-06-03 18:28:58,396 | INFO     | [data] control thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:58,490 | INFO     | [payload] control thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:58,806 | INFO     | [job] control thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:58,948 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:58,996 | INFO     | [job] validate thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:59,024 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:59,038 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:59,044 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:59,105 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:59,372 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:28:59,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:04:26] 2025-06-03 18:28:59,872 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:29:03,598 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:04:26] 2025-06-03 18:29:04,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591481997120)>', '<ExcThread(monitor, started 140590880630528)>']
[2025-06-03 21:04:26] 2025-06-03 18:29:04,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:04:26] 2025-06-03 18:29:04,905 | INFO     | [monitor] control thread has ended
[2025-06-03 21:04:26] 2025-06-03 18:29:09,337 | INFO     | all workflow threads have been joined
[2025-06-03 21:04:26] 2025-06-03 18:29:09,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:04:26] 2025-06-03 18:29:09,338 | INFO     | traces error code: 0
[2025-06-03 21:04:26] 2025-06-03 18:29:09,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:04:26] 2025-06-03 18:29:09,601 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:04:26] 2025-06-03 18:29:09,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:04:26] 2025-06-03 18:29:09,732 [wrapper] pilotpid: 20770
[2025-06-03 21:04:26] 2025-06-03 18:29:09,759 [wrapper] Pilot exit status: 0
[2025-06-03 21:04:26] 2025-06-03 18:29:10,168 [wrapper] pandaids: 6677472586
[2025-06-03 21:04:26] 2025-06-03 18:29:10,751 [wrapper] cleanup supervisor_pilot  9338 20771
[2025-06-03 21:04:26] 2025-06-03 18:29:10,804 [wrapper] Test setup, not cleaning
[2025-06-03 21:04:26] 2025-06-03 18:29:10,863 [wrapper] apfmon messages muted
[2025-06-03 21:04:26] 2025-06-03 18:29:10,937 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:04:26] 2025-06-03 18:29:10,987 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:04:26]  *** Error codes and diagnostics ***
[2025-06-03 21:04:26]     "exeErrorCode": 0,
[2025-06-03 21:04:26]     "exeErrorDiag": "",
[2025-06-03 21:04:26]     "pilotErrorCode": 0,
[2025-06-03 21:04:26]     "pilotErrorDiag": "",
[2025-06-03 21:04:26]  *** Listing of results directory ***
[2025-06-03 21:04:26] total 393324
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:38 pilot3.tar.gz
[2025-06-03 21:04:26] -rwx------. 1 boinc boinc     37140 Jun  3 08:05 runpilot2-wrapper.sh
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc      5111 Jun  3 08:05 queuedata.json
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:04:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:13 run_atlas
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:13 job.xml
[2025-06-03 21:04:26] -rw-r--r--. 2 boinc boinc 214554236 Jun  3 16:13 EVNT.45006593._000869.pool.root.1
[2025-06-03 21:04:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 16:13 shared
[2025-06-03 21:04:26] -rw-r--r--. 2 boinc boinc    508876 Jun  3 16:13 input.tar.gz
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc      6390 Jun  3 16:13 init_data.xml
[2025-06-03 21:04:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:13 start_atlas.sh
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:13 boinc_lockfile
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc      2524 Jun  3 16:15 pandaJob.out
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc    982724 Jun  3 16:18 agis_schedconf.cvmfs.json
[2025-06-03 21:04:26] drwx------. 4 boinc boinc      4096 Jun  3 16:18 pilot3
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc 181036685 Jun  3 20:26 HITS.45006595._021720.pool.root.1
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:26 boinc_task_state.xml
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc      1030 Jun  3 20:27 memory_monitor_summary.json
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc   1603667 Jun  3 20:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc    395020 Jun  3 20:27 log.45006595._021720.job.log.tgz.1
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc        95 Jun  3 20:28 pilot_heartbeat.json
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc      7694 Jun  3 20:28 heartbeat.json
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc      4416 Jun  3 20:29 pilotlog.txt
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc   1281987 Jun  3 20:29 log.45006595._021720.job.log.1
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc       357 Jun  3 20:29 output.list
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:29 runtime_log
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc   1699840 Jun  3 20:29 result.tar.gz
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc       656 Jun  3 20:29 yZUMDmQxZg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4XXKDmqAPlXn.diag
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:29 runtime_log.err
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:04 boinc_mmap_file
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:04 wrapper_checkpoint.txt
[2025-06-03 21:04:26] -rw-r--r--. 1 boinc boinc     20597 Jun  3 21:04 stderr.txt
[2025-06-03 21:04:26] HITS file was successfully produced:
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc 181036685 Jun  3 20:26 shared/HITS.pool.root.1
[2025-06-03 21:04:26]  *** Contents of shared directory: ***
[2025-06-03 21:04:26] total 388500
[2025-06-03 21:04:26] -rw-r--r--. 2 boinc boinc 214554236 Jun  3 16:13 ATLAS.root_0
[2025-06-03 21:04:26] -rw-r--r--. 2 boinc boinc    508876 Jun  3 16:13 input.tar.gz
[2025-06-03 21:04:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:13 start_atlas.sh
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc 181036685 Jun  3 20:26 HITS.pool.root.1
[2025-06-03 21:04:26] -rw-------. 1 boinc boinc   1699840 Jun  3 20:29 result.tar.gz
21:04:28 (17041): run_atlas exited; CPU time 52538.248869
21:04:28 (17041): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN