Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:29:07 (2648341): wrapper (7.7.26015): starting
01:29:07 (2648341): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:29:07] Arguments: --nthreads 8
[2025-06-03 01:29:07] Threads: 8
[2025-06-03 01:29:07] Checking for CVMFS
[2025-06-03 01:29:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:29:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:29:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:29:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:29:09] 2.11.3.0 231875 400913 186776 146735 1 107 33014536 45568000 13689 130560 0 1973484458 99.760 1546261150 19096 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 01:29:09] CVMFS is ok
[2025-06-03 01:29:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 01:29:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 01:29:09] Further information can be found at the LHC@home message board.
[2025-06-03 01:29:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:29:09] Checking for apptainer binary...
[2025-06-03 01:29:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:29:09] Running /usr/bin/apptainer --version
[2025-06-03 01:29:10] apptainer version 1.3.3-1.el9
[2025-06-03 01:29:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:29:11] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0019.triumf.lcg
[2025-06-03 01:29:11] apptainer works
[2025-06-03 01:29:11] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:29:11] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:29:11] Starting ATLAS job with PandaID=6677472619
[2025-06-03 01:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 01:36:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | INFO     | extracted standard info from prmon json
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 01:36:22] 2025-06-03 08:36:06,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 01:36:22] 2025-06-03 08:36:06,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | WARNING  | wrong length of table data, x=[1748939545.0, 1748939606.0], y=[1702.0, 606683.0] (must be same and length>=4)
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | ..............................
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . Timing measurements:
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . get job = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . initial setup = 8 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . payload setup = 42 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . stage-in = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . payload execution = 109 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . stage-out = 2 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . log creation = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | ..............................
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677472619/pilotlog.txt
[2025-06-03 01:36:22] 2025-06-03 08:36:06,850 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 01:36:22] - Log from pilotlog.txt -
[2025-06-03 01:36:22] 2025-06-03 08:36:06,807 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 01:36:22] 2025-06-03 08:36:06,808 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677472619/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | INFO     | extracted standard info from prmon json
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 01:36:22] 2025-06-03 08:36:06,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 01:36:22] 2025-06-03 08:36:06,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | WARNING  | wrong length of table data, x=[1748939545.0, 1748939606.0], y=[1702.0, 606683.0] (must be same and length>=4)
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | ..............................
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . Timing measurements:
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . get job = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . initial setup = 8 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . payload setup = 42 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . stage-in = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . payload execution = 109 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . stage-out = 2 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . log creation = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | ..............................
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677472619/pilotlog.txt
[2025-06-03 01:36:22] 2025-06-03 08:36:06,850 | WARNING  | 
[2025-06-03 01:36:22] [begin log extracts]
[2025-06-03 01:36:22] - Log from pilotlog.txt -
[2025-06-03 01:36:22] 2025-06-03 08:36:06,807 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 01:36:22] 2025-06-03 08:36:06,808 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677472619/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | INFO     | extracted standard info from prmon json
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 01:36:22] 2025-06-03 08:36:06,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 01:36:22] 2025-06-03 08:36:06,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 01:36:22] 2025-06-03 08:36:06,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | WARNING  | wrong length of table data, x=[1748939545.0, 1748939606.0], y=[1702.0, 606683.0] (must be same and length>=4)
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | ..............................
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . Timing measurements:
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . get job = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,811 | INFO     | . initial setup = 8 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . payload setup = 42 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . stage-in = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . payload execution = 109 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . stage-out = 2 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | . log creation = 0 s
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | ..............................
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 01:36:22] 2025-06-03 08:36:06,812 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677472619/pilotlog.txt
[2025-06-03 01:36:22] [end log extracts]
[2025-06-03 01:36:22] 2025-06-03 08:36:06,850 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 01:36:22] 2025-06-03 08:36:06,851 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 01:36:22] 2025-06-03 08:36:07,049 | INFO     | 
[2025-06-03 01:36:22] 2025-06-03 08:36:07,049 | INFO     | job summary report
[2025-06-03 01:36:22] 2025-06-03 08:36:07,049 | INFO     | --------------------------------------------------
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | PanDA job id: 6677472619
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | task id: 45006595
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 01:33:30,195 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | pilot state: failed 
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | transexitcode: 65
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | exeerrorcode: 65
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | exitcode: 65
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | cpuconsumptiontime: 20 s
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | nevents: 0
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | neventsw: 0
[2025-06-03 01:36:22] 2025-06-03 08:36:07,050 | INFO     | pid: 2683588
[2025-06-03 01:36:22] 2025-06-03 08:36:07,051 | INFO     | pgrp: 2683588
[2025-06-03 01:36:22] 2025-06-03 08:36:07,051 | INFO     | corecount: 8
[2025-06-03 01:36:22] 2025-06-03 08:36:07,051 | INFO     | event service: False
[2025-06-03 01:36:22] 2025-06-03 08:36:07,051 | INFO     | sizes: {0: 2405179, 12: 2405179, 23: 2405441, 34: 2405441, 156: 2428721, 157: 2428697, 162: 2433088, 163: 2433116, 297: 2433258}
[2025-06-03 01:36:22] 2025-06-03 08:36:07,051 | INFO     | --------------------------------------------------
[2025-06-03 01:36:22] 2025-06-03 08:36:07,051 | INFO     | 
[2025-06-03 01:36:22] 2025-06-03 08:36:07,051 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,366 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 01:36:22] 2025-06-03 08:36:07,367 | INFO     | job 6677472619 has completed (purged errors)
[2025-06-03 01:36:22] 2025-06-03 08:36:07,367 | INFO     | overall cleanup function is called
[2025-06-03 01:36:22] 2025-06-03 08:36:08,373 | INFO     | --- collectZombieJob: --- 10, [2683588]
[2025-06-03 01:36:22] 2025-06-03 08:36:08,373 | INFO     | zombie collector waiting for pid 2683588
[2025-06-03 01:36:22] 2025-06-03 08:36:08,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 01:36:22] 2025-06-03 08:36:08,374 | INFO     | collected zombie processes
[2025-06-03 01:36:22] 2025-06-03 08:36:08,374 | INFO     | will attempt to kill all subprocesses of pid=2683588
[2025-06-03 01:36:22] 2025-06-03 08:36:09,257 | INFO     | process IDs to be killed: [2683588] (in reverse order)
[2025-06-03 01:36:22] 2025-06-03 08:36:09,690 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 01:36:22] 2025-06-03 08:36:09,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 01:36:22] 2025-06-03 08:36:09,762 | INFO     | did not find any defunct processes belonging to 2683588
[2025-06-03 01:36:22] 2025-06-03 08:36:09,824 | INFO     | did not find any defunct processes belonging to 2683588
[2025-06-03 01:36:22] 2025-06-03 08:36:09,825 | INFO     | ready for new job
[2025-06-03 01:36:22] 2025-06-03 08:36:09,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 01:36:22] 2025-06-03 08:36:09,826 | INFO     | **************************************
[2025-06-03 01:36:22] 2025-06-03 08:36:09,826 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 01:36:22] 2025-06-03 08:36:09,826 | INFO     | **************************************
[2025-06-03 01:36:22] 2025-06-03 08:36:09,826 | INFO     | 
[2025-06-03 01:36:22] 2025-06-03 08:36:09,844 | INFO     | architecture information:
[2025-06-03 01:36:22] 2025-06-03 08:36:09,869 | INFO     | executing command: cat /etc/os-release
[2025-06-03 01:36:22] 2025-06-03 08:36:10,017 | INFO     | cat /etc/os-release:
[2025-06-03 01:36:22] NAME="CentOS Linux"
[2025-06-03 01:36:22] VERSION="7 (Core)"
[2025-06-03 01:36:22] ID="centos"
[2025-06-03 01:36:22] ID_LIKE="rhel fedora"
[2025-06-03 01:36:22] VERSION_ID="7"
[2025-06-03 01:36:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 01:36:22] ANSI_COLOR="0;31"
[2025-06-03 01:36:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 01:36:22] HOME_URL="https://www.centos.org/"
[2025-06-03 01:36:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 01:36:22] 
[2025-06-03 01:36:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 01:36:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 01:36:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 01:36:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 01:36:22] 
[2025-06-03 01:36:22] 2025-06-03 08:36:10,017 | INFO     | **************************************
[2025-06-03 01:36:22] 2025-06-03 08:36:10,521 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 01:36:22] 2025-06-03 08:36:10,773 | INFO     | sufficient remaining disk space (1285700976640 B)
[2025-06-03 01:36:22] 2025-06-03 08:36:10,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 01:36:22] 2025-06-03 08:36:10,774 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 01:36:22] 2025-06-03 08:36:10,774 | INFO     | update_server=False
[2025-06-03 01:36:22] 2025-06-03 08:36:10,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 01:36:22] 2025-06-03 08:36:10,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 01:36:22] 2025-06-03 08:36:10,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:36:22] 2025-06-03 08:36:10,779 | INFO     | aborting loop
[2025-06-03 01:36:22] 2025-06-03 08:36:10,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 01:36:22] 2025-06-03 08:36:10,928 | INFO     | all payload control threads have been joined
[2025-06-03 01:36:22] 2025-06-03 08:36:11,314 | INFO     | all data control threads have been joined
[2025-06-03 01:36:22] 2025-06-03 08:36:11,784 | INFO     | [job] retrieve thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:11,785 | INFO     | [job] job monitor thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:11,955 | INFO     | [payload] control thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:36:22] 2025-06-03 08:36:12,128 | INFO     | all job control threads have been joined
[2025-06-03 01:36:22] 2025-06-03 08:36:12,320 | INFO     | [data] control thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,321 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,405 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,413 | INFO     | [data] copytool_in thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,508 | INFO     | [payload] validate_post thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,786 | INFO     | [data] copytool_out thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,889 | INFO     | PID=2655349 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 01:36:22] 2025-06-03 08:36:12,889 | INFO     | .. there are 26 such processes running
[2025-06-03 01:36:22] 2025-06-03 08:36:12,890 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 01:36:22] 2025-06-03 08:36:12,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 01:36:22] 2025-06-03 08:36:12,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 01:36:22] 2025-06-03 08:36:12,958 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:12,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:13,091 | INFO     | [job] queue monitor thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:13,134 | INFO     | [job] validate thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:13,138 | INFO     | [job] control thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:13,344 | INFO     | [payload] failed_post thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:14,787 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 01:36:22] 2025-06-03 08:36:15,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331144902464)>', '<ExcThread(monitor, started 140330607310592)>']
[2025-06-03 01:36:22] 2025-06-03 08:36:15,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 01:36:22] 2025-06-03 08:36:15,908 | INFO     | [monitor] control thread has ended
[2025-06-03 01:36:22] 2025-06-03 08:36:20,847 | INFO     | all workflow threads have been joined
[2025-06-03 01:36:22] 2025-06-03 08:36:20,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 01:36:22] 2025-06-03 08:36:20,848 | INFO     | traces error code: 0
[2025-06-03 01:36:22] 2025-06-03 08:36:20,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 01:36:22] 2025-06-03 08:36:21,622 [wrapper] ==== pilot stdout END ====
[2025-06-03 01:36:22] 2025-06-03 08:36:21,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 01:36:22] 2025-06-03 08:36:21,682 [wrapper] pilotpid: 2655349
[2025-06-03 01:36:22] 2025-06-03 08:36:21,715 [wrapper] Pilot exit status: 0
[2025-06-03 01:36:22] 2025-06-03 08:36:21,910 [wrapper] pandaids: 6677472619
[2025-06-03 01:36:22] 2025-06-03 08:36:22,262 [wrapper] cleanup supervisor_pilot 2655365 2655350
[2025-06-03 01:36:22] 2025-06-03 08:36:22,312 [wrapper] Test setup, not cleaning
[2025-06-03 01:36:22] 2025-06-03 08:36:22,332 [wrapper] apfmon messages muted
[2025-06-03 01:36:22] 2025-06-03 08:36:22,366 [wrapper] ==== wrapper stdout END ====
[2025-06-03 01:36:22] 2025-06-03 08:36:22,397 [wrapper] ==== wrapper stderr END ====
[2025-06-03 01:36:22]  *** Error codes and diagnostics ***
[2025-06-03 01:36:22]     "exeErrorCode": 65,
[2025-06-03 01:36:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 01:36:22]     "pilotErrorCode": 1305,
[2025-06-03 01:36:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 01:36:22]  *** Listing of results directory ***
[2025-06-03 01:36:22] total 215184
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:38 pilot3.tar.gz
[2025-06-03 01:36:22] -rwx------. 1 boinc boinc     37140 Jun  2 23:09 runpilot2-wrapper.sh
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:09 queuedata.json
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc       100 Jun  3 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 01:36:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 01:29 run_atlas
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc       105 Jun  3 01:29 job.xml
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc      6453 Jun  3 01:29 init_data.xml
[2025-06-03 01:36:22] -rw-r--r--. 2 boinc boinc 216303288 Jun  3 01:29 EVNT.45006593._000870.pool.root.1
[2025-06-03 01:36:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:29 start_atlas.sh
[2025-06-03 01:36:22] drwxrwx--x. 2 boinc boinc      4096 Jun  3 01:29 shared
[2025-06-03 01:36:22] -rw-r--r--. 2 boinc boinc    508885 Jun  3 01:29 input.tar.gz
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc         0 Jun  3 01:29 boinc_lockfile
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc      2524 Jun  3 01:29 pandaJob.out
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc    985498 Jun  3 01:30 agis_schedconf.cvmfs.json
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc   1603667 Jun  3 01:30 agis_ddmendpoints.agis.ALL.json
[2025-06-03 01:36:22] drwx------. 4 boinc boinc      4096 Jun  3 01:30 pilot3
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc       524 Jun  3 01:33 boinc_task_state.xml
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc       982 Jun  3 01:33 memory_monitor_summary.json
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc     21854 Jun  3 01:33 log.45006595._021753.job.log.tgz.1
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc      8342 Jun  3 01:36 heartbeat.json
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc        95 Jun  3 01:36 pilot_heartbeat.json
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc      4747 Jun  3 01:36 pilotlog.txt
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc        23 Jun  3 01:36 wrapper_checkpoint.txt
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc      8192 Jun  3 01:36 boinc_mmap_file
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc     85194 Jun  3 01:36 log.45006595._021753.job.log.1
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc       188 Jun  3 01:36 output.list
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc       620 Jun  3 01:36 runtime_log
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc    122880 Jun  3 01:36 result.tar.gz
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc      8647 Jun  3 01:36 runtime_log.err
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc       647 Jun  3 01:36 6iGNDmL1Zg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYYXKDmBEqubm.diag
[2025-06-03 01:36:22] -rw-r--r--. 1 boinc boinc     21962 Jun  3 01:36 stderr.txt
[2025-06-03 01:36:22] No HITS result produced
[2025-06-03 01:36:22]  *** Contents of shared directory: ***
[2025-06-03 01:36:22] total 211876
[2025-06-03 01:36:22] -rw-r--r--. 2 boinc boinc 216303288 Jun  3 01:29 ATLAS.root_0
[2025-06-03 01:36:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:29 start_atlas.sh
[2025-06-03 01:36:22] -rw-r--r--. 2 boinc boinc    508885 Jun  3 01:29 input.tar.gz
[2025-06-03 01:36:22] -rw-------. 1 boinc boinc    122880 Jun  3 01:36 result.tar.gz
01:36:24 (2648341): run_atlas exited; CPU time 33.386321
01:36:24 (2648341): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN