Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:34:37 (25232): wrapper (7.7.26015): starting
16:34:37 (25232): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:34:37] Arguments: --nthreads 8
[2025-06-03 16:34:37] Threads: 8
[2025-06-03 16:34:37] Checking for CVMFS
[2025-06-03 16:34:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:34:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:34:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:34:38] 2.11.2.0 13026 32021 89432 146743 3 155 19263222 25165824 4359 130560 0 16439394 99.835 18396184 2748 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 16:34:38] CVMFS is ok
[2025-06-03 16:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:34:38] Checking for apptainer binary...
[2025-06-03 16:34:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:34:38] Running /usr/bin/apptainer --version
[2025-06-03 16:34:38] apptainer version 1.3.2-1.el7
[2025-06-03 16:34:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:34:39] cg-vwn329.simple-grid.lan
[2025-06-03 16:34:39] apptainer works
[2025-06-03 16:34:39] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:34:39] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:34:39] Starting ATLAS job with PandaID=6677471251
[2025-06-03 16:34:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:06:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:06:28] 2025-06-03 18:20:05,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:06:28] 2025-06-03 18:20:05,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:06:28] 2025-06-03 18:20:05,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:06:28] 2025-06-03 18:20:05,621 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:06:28] 2025-06-03 18:20:05,621 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,623 | INFO     | sum of deviations: -19742210128.999996
[2025-06-03 21:06:28] 2025-06-03 18:20:05,623 | INFO     | mean x: 1748968012.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,623 | INFO     | mean y: 2501423.6438356163
[2025-06-03 21:06:28] 2025-06-03 18:20:05,623 | INFO     | -- intersect: 10604211495.973093
[2025-06-03 21:06:28] 2025-06-03 18:20:05,623 | INFO     | intersect: 10604211495.973093
[2025-06-03 21:06:28] 2025-06-03 18:20:05,624 | INFO     | chi2: 2.648237872660936
[2025-06-03 21:06:28] 2025-06-03 18:20:05,624 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 21:06:28] 2025-06-03 18:20:05,626 | INFO     | sum of deviations: -4745794296.500002
[2025-06-03 21:06:28] 2025-06-03 18:20:05,626 | INFO     | mean x: 1748967859.5
[2025-06-03 21:06:28] 2025-06-03 18:20:05,626 | INFO     | mean y: 2511726.0140186916
[2025-06-03 21:06:28] 2025-06-03 18:20:05,626 | INFO     | -- intersect: 2733881367.241866
[2025-06-03 21:06:28] 2025-06-03 18:20:05,627 | INFO     | intersect: 2733881367.241866
[2025-06-03 21:06:28] 2025-06-03 18:20:05,627 | INFO     | chi2: 1.8831210486276757
[2025-06-03 21:06:28] 2025-06-03 18:20:05,627 | INFO     | current chi2=1.8831210486276757 (change=28.891544522187303 %)
[2025-06-03 21:06:28] 2025-06-03 18:20:05,627 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,629 | INFO     | sum of deviations: -4468132087.000004
[2025-06-03 21:06:28] 2025-06-03 18:20:05,629 | INFO     | mean x: 1748967707.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,629 | INFO     | mean y: 2511929.5358851673
[2025-06-03 21:06:28] 2025-06-03 18:20:05,629 | INFO     | -- intersect: 2763092672.8472004
[2025-06-03 21:06:28] 2025-06-03 18:20:05,630 | INFO     | intersect: 2763092672.8472004
[2025-06-03 21:06:28] 2025-06-03 18:20:05,630 | INFO     | chi2: 1.8830200168930418
[2025-06-03 21:06:28] 2025-06-03 18:20:05,630 | INFO     | current chi2=1.8830200168930418 (change=0.005365121626544683 %)
[2025-06-03 21:06:28] 2025-06-03 18:20:05,630 | INFO     | right removable region: 208
[2025-06-03 21:06:28] 2025-06-03 18:20:05,638 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 21:06:28] 2025-06-03 18:20:05,640 | INFO     | sum of deviations: -57751407424.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,640 | INFO     | mean x: 1748968164.5
[2025-06-03 21:06:28] 2025-06-03 18:20:05,640 | INFO     | mean y: 2527777.4392523365
[2025-06-03 21:06:28] 2025-06-03 18:20:05,640 | INFO     | -- intersect: 33240476712.679966
[2025-06-03 21:06:28] 2025-06-03 18:20:05,640 | INFO     | intersect: 33240476712.679966
[2025-06-03 21:06:28] 2025-06-03 18:20:05,641 | INFO     | chi2: 0.9957336658464757
[2025-06-03 21:06:28] 2025-06-03 18:20:05,641 | INFO     | current chi2=0.9957336658464757 (change=62.40014252020467 %)
[2025-06-03 21:06:28] 2025-06-03 18:20:05,641 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,643 | INFO     | sum of deviations: -56327298740.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,643 | INFO     | mean x: 1748968317.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,643 | INFO     | mean y: 2526694.8181818184
[2025-06-03 21:06:28] 2025-06-03 18:20:05,643 | INFO     | -- intersect: 34803671206.69961
[2025-06-03 21:06:28] 2025-06-03 18:20:05,643 | INFO     | intersect: 34803671206.69961
[2025-06-03 21:06:28] 2025-06-03 18:20:05,644 | INFO     | chi2: 0.9808778007251245
[2025-06-03 21:06:28] 2025-06-03 18:20:05,644 | INFO     | current chi2=0.9808778007251245 (change=1.4919516765280971 %)
[2025-06-03 21:06:28] 2025-06-03 18:20:05,644 | INFO     | left removable region: 20
[2025-06-03 21:06:28] 2025-06-03 18:20:05,644 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,646 | INFO     | sum of deviations: -27763298104.500008
[2025-06-03 21:06:28] 2025-06-03 18:20:05,646 | INFO     | mean x: 1748968286.5
[2025-06-03 21:06:28] 2025-06-03 18:20:05,646 | INFO     | mean y: 2528475.60106383
[2025-06-03 21:06:28] 2025-06-03 18:20:05,646 | INFO     | -- intersect: 23570017145.449745
[2025-06-03 21:06:28] 2025-06-03 18:20:05,646 | INFO     | intersect: 23570017145.449745
[2025-06-03 21:06:28] 2025-06-03 18:20:05,646 | INFO     | chi2: 0.1654281382100378
[2025-06-03 21:06:28] 2025-06-03 18:20:05,647 | INFO     | -- intersect: 23570017145.449745
[2025-06-03 21:06:28] 2025-06-03 18:20:05,647 | INFO     | current memory leak: -13.48 B/s (using 188 data points, chi2=0.17)
[2025-06-03 21:06:28] 2025-06-03 18:20:05,647 | INFO     | ..............................
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . Timing measurements:
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . get job = 0 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . initial setup = 2 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . payload setup = 19 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . stage-in = 0 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . payload execution = 13357 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . stage-out = 4 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | . log creation = 1 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,648 | INFO     | ..............................
[2025-06-03 21:06:28] 2025-06-03 18:20:05,796 | INFO     | 
[2025-06-03 21:06:28] 2025-06-03 18:20:05,796 | INFO     | job summary report
[2025-06-03 21:06:28] 2025-06-03 18:20:05,796 | INFO     | --------------------------------------------------
[2025-06-03 21:06:28] 2025-06-03 18:20:05,796 | INFO     | PanDA job id: 6677471251
[2025-06-03 21:06:28] 2025-06-03 18:20:05,796 | INFO     | task id: 45006595
[2025-06-03 21:06:28] 2025-06-03 18:20:05,796 | INFO     | errors: (none)
[2025-06-03 21:06:28] 2025-06-03 18:20:05,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | pilot state: finished 
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | transexitcode: 0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | exeerrorcode: 0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | exeerrordiag: 
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | exitcode: 0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | exitmsg: OK
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | cpuconsumptiontime: 49809 s
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | nevents: 400
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | neventsw: 0
[2025-06-03 21:06:28] 2025-06-03 18:20:05,797 | INFO     | pid: 7053
[2025-06-03 21:06:28] 2025-06-03 18:20:05,798 | INFO     | pgrp: 7053
[2025-06-03 21:06:28] 2025-06-03 18:20:05,798 | INFO     | corecount: 8
[2025-06-03 21:06:28] 2025-06-03 18:20:05,798 | INFO     | event service: False
[2025-06-03 21:06:28] 2025-06-03 18:20:05,798 | INFO     | sizes: {0: 2405182, 1: 2405182, 9: 2405416, 12: 2405444, 13381: 2435041, 13386: 2444166, 13485: 2444280}
[2025-06-03 21:06:28] 2025-06-03 18:20:05,798 | INFO     | --------------------------------------------------
[2025-06-03 21:06:28] 2025-06-03 18:20:05,798 | INFO     | 
[2025-06-03 21:06:28] 2025-06-03 18:20:05,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 21:06:28] 2025-06-03 18:20:06,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:06:28] 2025-06-03 18:20:06,264 | INFO     | job 6677471251 has completed (purged errors)
[2025-06-03 21:06:28] 2025-06-03 18:20:06,265 | INFO     | overall cleanup function is called
[2025-06-03 21:06:28] 2025-06-03 18:20:07,273 | INFO     | --- collectZombieJob: --- 10, [7053]
[2025-06-03 21:06:28] 2025-06-03 18:20:07,273 | INFO     | zombie collector waiting for pid 7053
[2025-06-03 21:06:28] 2025-06-03 18:20:07,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:06:28] 2025-06-03 18:20:07,273 | INFO     | collected zombie processes
[2025-06-03 21:06:28] 2025-06-03 18:20:07,273 | INFO     | will attempt to kill all subprocesses of pid=7053
[2025-06-03 21:06:28] 2025-06-03 18:20:07,426 | INFO     | process IDs to be killed: [7053] (in reverse order)
[2025-06-03 21:06:28] 2025-06-03 18:20:08,371 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:06:28] 2025-06-03 18:20:08,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:06:28] 2025-06-03 18:20:08,375 | INFO     | did not find any defunct processes belonging to 7053
[2025-06-03 21:06:28] 2025-06-03 18:20:08,378 | INFO     | did not find any defunct processes belonging to 7053
[2025-06-03 21:06:28] 2025-06-03 18:20:08,379 | INFO     | ready for new job
[2025-06-03 21:06:28] 2025-06-03 18:20:08,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:06:28] 2025-06-03 18:20:08,381 | INFO     | **************************************
[2025-06-03 21:06:28] 2025-06-03 18:20:08,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:06:28] 2025-06-03 18:20:08,381 | INFO     | **************************************
[2025-06-03 21:06:28] 2025-06-03 18:20:08,381 | INFO     | 
[2025-06-03 21:06:28] 2025-06-03 18:20:08,382 | INFO     | pilot is running in a VM
[2025-06-03 21:06:28] 2025-06-03 18:20:08,382 | INFO     | architecture information:
[2025-06-03 21:06:28] 2025-06-03 18:20:08,390 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:06:28] 2025-06-03 18:20:08,589 | INFO     | PID=28913 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 21:06:28] 2025-06-03 18:20:08,590 | INFO     | .. there are 9 such processes running
[2025-06-03 21:06:28] 2025-06-03 18:20:08,677 | INFO     | cat /etc/os-release:
[2025-06-03 21:06:28] NAME="CentOS Linux"
[2025-06-03 21:06:28] VERSION="7 (Core)"
[2025-06-03 21:06:28] ID="centos"
[2025-06-03 21:06:28] ID_LIKE="rhel fedora"
[2025-06-03 21:06:28] VERSION_ID="7"
[2025-06-03 21:06:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:06:28] ANSI_COLOR="0;31"
[2025-06-03 21:06:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:06:28] HOME_URL="https://www.centos.org/"
[2025-06-03 21:06:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:06:28] 
[2025-06-03 21:06:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:06:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:06:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:06:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:06:28] 
[2025-06-03 21:06:28] 2025-06-03 18:20:08,677 | INFO     | **************************************
[2025-06-03 21:06:28] 2025-06-03 18:20:09,181 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 21:06:28] 2025-06-03 18:20:09,351 | INFO     | sufficient remaining disk space (497051238400 B)
[2025-06-03 21:06:28] 2025-06-03 18:20:09,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:06:28] 2025-06-03 18:20:09,352 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:06:28] 2025-06-03 18:20:09,352 | INFO     | update_server=False
[2025-06-03 21:06:28] 2025-06-03 18:20:09,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:06:28] 2025-06-03 18:20:09,356 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:06:28] 2025-06-03 18:20:09,356 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:06:28] 2025-06-03 18:20:09,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:06:28] 2025-06-03 18:20:09,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:06:28] 2025-06-03 18:20:09,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:06:28] 2025-06-03 18:20:09,357 | INFO     | aborting loop
[2025-06-03 21:06:28] 2025-06-03 18:20:10,017 | INFO     | all data control threads have been joined
[2025-06-03 21:06:28] 2025-06-03 18:20:10,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:06:28] 2025-06-03 18:20:10,343 | INFO     | all job control threads have been joined
[2025-06-03 21:06:28] 2025-06-03 18:20:10,359 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:10,363 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:10,482 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:10,583 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:10,673 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:10,725 | INFO     | all payload control threads have been joined
[2025-06-03 21:06:28] 2025-06-03 18:20:10,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:06:28] 2025-06-03 18:20:11,023 | INFO     | [data] control thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,349 | INFO     | [job] control thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,452 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,504 | INFO     | [job] validate thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,663 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,700 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,732 | INFO     | [payload] control thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:11,818 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:12,131 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:12,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:06:28] 2025-06-03 18:20:16,228 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:06:28] 2025-06-03 18:20:16,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657554818880)>', '<ExcThread(monitor, started 139656893032192)>']
[2025-06-03 21:06:28] 2025-06-03 18:20:17,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:06:28] 2025-06-03 18:20:17,404 | INFO     | [monitor] control thread has ended
[2025-06-03 21:06:28] 2025-06-03 18:20:21,846 | INFO     | all workflow threads have been joined
[2025-06-03 21:06:28] 2025-06-03 18:20:21,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:06:28] 2025-06-03 18:20:21,846 | INFO     | traces error code: 0
[2025-06-03 21:06:28] 2025-06-03 18:20:21,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:06:28] 2025-06-03 18:20:22,242 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:06:28] 2025-06-03 18:20:22,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:06:28] 2025-06-03 18:20:22,397 [wrapper] pilotpid: 28913
[2025-06-03 21:06:28] 2025-06-03 18:20:22,478 [wrapper] Pilot exit status: 0
[2025-06-03 21:06:28] 2025-06-03 18:20:22,934 [wrapper] pandaids: 6677471251
[2025-06-03 21:06:28] 2025-06-03 18:20:24,001 [wrapper] cleanup supervisor_pilot  2952 28914
[2025-06-03 21:06:28] 2025-06-03 18:20:24,106 [wrapper] Test setup, not cleaning
[2025-06-03 21:06:28] 2025-06-03 18:20:24,218 [wrapper] apfmon messages muted
[2025-06-03 21:06:28] 2025-06-03 18:20:24,304 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:06:28] 2025-06-03 18:20:24,375 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:06:28]  *** Error codes and diagnostics ***
[2025-06-03 21:06:28]     "exeErrorCode": 0,
[2025-06-03 21:06:28]     "exeErrorDiag": "",
[2025-06-03 21:06:28]     "pilotErrorCode": 0,
[2025-06-03 21:06:28]     "pilotErrorDiag": "",
[2025-06-03 21:06:28]  *** Listing of results directory ***
[2025-06-03 21:06:28] total 389748
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:14 pilot3.tar.gz
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:36 queuedata.json
[2025-06-03 21:06:28] -rwx------. 1 boinc boinc     37140 Jun  3 07:36 runpilot2-wrapper.sh
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:06:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:34 run_atlas
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:34 job.xml
[2025-06-03 21:06:28] -rw-r--r--. 2 boinc boinc 216953258 Jun  3 16:34 EVNT.45006593._000838.pool.root.1
[2025-06-03 21:06:28] drwxrwx--x. 2 boinc boinc        68 Jun  3 16:34 shared
[2025-06-03 21:06:28] -rw-r--r--. 2 boinc boinc    508882 Jun  3 16:34 input.tar.gz
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc      6391 Jun  3 16:34 init_data.xml
[2025-06-03 21:06:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:34 start_atlas.sh
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:34 boinc_lockfile
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc      2524 Jun  3 16:34 pandaJob.out
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc    982724 Jun  3 16:34 agis_schedconf.cvmfs.json
[2025-06-03 21:06:28] drwx------. 4 boinc boinc      4096 Jun  3 16:34 pilot3
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc 175218445 Jun  3 20:17 HITS.45006595._020948.pool.root.1
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:17 boinc_task_state.xml
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc      1019 Jun  3 20:18 memory_monitor_summary.json
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc   1603667 Jun  3 20:18 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc    387727 Jun  3 20:18 log.45006595._020948.job.log.tgz.1
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc        95 Jun  3 20:19 pilot_heartbeat.json
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc      7683 Jun  3 20:20 heartbeat.json
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc      4931 Jun  3 20:20 pilotlog.txt
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc   1169308 Jun  3 20:20 log.45006595._020948.job.log.1
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc       357 Jun  3 20:20 output.list
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:20 runtime_log
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc   1576960 Jun  3 20:20 result.tar.gz
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:20 runtime_log.err
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc       656 Jun  3 20:20 ndYLDmKVZg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkTXKDmGEIeGm.diag
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:06 boinc_mmap_file
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:06 wrapper_checkpoint.txt
[2025-06-03 21:06:28] -rw-r--r--. 1 boinc boinc     20567 Jun  3 21:06 stderr.txt
[2025-06-03 21:06:28] HITS file was successfully produced:
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc 175218445 Jun  3 20:17 shared/HITS.pool.root.1
[2025-06-03 21:06:28]  *** Contents of shared directory: ***
[2025-06-03 21:06:28] total 385040
[2025-06-03 21:06:28] -rw-r--r--. 2 boinc boinc 216953258 Jun  3 16:34 ATLAS.root_0
[2025-06-03 21:06:28] -rw-r--r--. 2 boinc boinc    508882 Jun  3 16:34 input.tar.gz
[2025-06-03 21:06:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:34 start_atlas.sh
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc 175218445 Jun  3 20:17 HITS.pool.root.1
[2025-06-03 21:06:28] -rw-------. 1 boinc boinc   1576960 Jun  3 20:20 result.tar.gz
21:06:30 (25232): run_atlas exited; CPU time 49981.098786
21:06:30 (25232): called boinc_finish(0)

</stderr_txt>
]]>

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